标题
Thermoadaptation in an Ancestral Diterpene Cyclase by Altered Loop Stability
作者
关键词
-
出版物
JOURNAL OF PHYSICAL CHEMISTRY B
Volume 126, Issue 21, Pages 3809-3821
出版商
American Chemical Society (ACS)
发表日期
2022-05-19
DOI
10.1021/acs.jpcb.1c10605
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Exploration of binding mechanism of triclosan towards cancer markers using molecular docking and molecular dynamics
- (2022) Prashant Bhardwaj et al. CHEMOSPHERE
- Engineering of Ancestors as a Tool to Elucidate Structure, Mechanism, and Specificity of Extant Terpene Cyclase
- (2021) Karen Schriever et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Parallel molecular mechanisms for enzyme temperature adaptation
- (2021) Margaux M. Pinney et al. SCIENCE
- Active-site loop variations adjust activity and selectivity of the cumene dioxygenase
- (2021) Peter M. Heinemann et al. Nature Communications
- Engineering Thermostability in Artificial Metalloenzymes to Increase Catalytic Activity
- (2021) Megan V. Doble et al. ACS Catalysis
- Bacterial Diterpene Synthases Prenylate Small Molecules
- (2021) Baofu Xu et al. ACS Catalysis
- Modular Chemoenzymatic Synthesis of Terpenes and their Analogues
- (2020) Rudolf K Allemann et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Designing for a green chemistry future
- (2020) Julie B. Zimmerman et al. SCIENCE
- Two Diterpene Synthases from Chryseobacterium : Chryseodiene Synthase and Wanjudiene Synthase
- (2020) Lukas Lauterbach et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Plexin-Bs enhance their GAP activity with a novel activation switch loop generating a cooperative enzyme
- (2020) Zhen-lu Li et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Selection enhances protein evolvability by increasing mutational robustness and foldability
- (2020) Jia Zheng et al. SCIENCE
- Consensus sequence design as a general strategy to create hyperstable, biologically active proteins
- (2019) Matt Sternke et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bacterial Diterpene Biosynthesis
- (2019) Jeroen S. Dickschat ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- How internal cavities destabilize a protein
- (2019) Mengjun Xue et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
- (2018) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- The state-of-the-art strategies of protein engineering for enzyme stabilization
- (2018) Qian Liu et al. BIOTECHNOLOGY ADVANCES
- Ancestral diterpene cyclases show increased thermostability and substrate acceptance
- (2018) Natalie M. Hendrikse et al. FEBS Journal
- Computational Design of Stable and Soluble Biocatalysts
- (2018) Milos Musil et al. ACS Catalysis
- On the Temperature Dependence of Enzyme-Catalyzed Rates
- (2016) Vickery L. Arcus et al. BIOCHEMISTRY
- MIB: Metal Ion-Binding Site Prediction and Docking Server
- (2016) Yu-Feng Lin et al. Journal of Chemical Information and Modeling
- Structure of the ent-Copalyl Diphosphate Synthase PtmT2 from Streptomyces platensis CB00739, a Bacterial Type II Diterpene Synthase
- (2016) Jeffrey D. Rudolf et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- On the Potential Origins of the High Stability of Reconstructed Ancestral Proteins
- (2016) Devin L. Trudeau et al. MOLECULAR BIOLOGY AND EVOLUTION
- W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis
- (2016) Jana Trifinopoulos et al. NUCLEIC ACIDS RESEARCH
- Evolutionary drivers of thermoadaptation in enzyme catalysis
- (2016) Vy Nguyen et al. SCIENCE
- Dual allosteric activation mechanisms in monomeric human glucokinase
- (2015) A. Carl Whittington et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Automatic Identification of Mobile and Rigid Substructures in Molecular Dynamics Simulations and Fractional Structural Fluctuation Analysis
- (2015) Leandro Martínez PLoS One
- Terpene synthases are widely distributed in bacteria
- (2014) Yuuki Yamada et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- High-Throughput Screening for Terpene-Synthase-Cyclization Activity and Directed Evolution of a Terpene Synthase
- (2013) Ryan Lauchli et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- 1.55Å-resolution structure of ent-copalyl diphosphate synthase and exploration of general acid function by site-directed mutagenesis
- (2013) Mustafa Köksal et al. BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS
- Bacterial diterpene synthases: new opportunities for mechanistic enzymology and engineered biosynthesis
- (2012) Michael J Smanski et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Insights into Diterpene Cyclization from Structure of Bifunctional Abietadiene Synthase fromAbies grandis
- (2012) Ke Zhou et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Prediction of Metal Ion–Binding Sites in Proteins Using the Fragment Transformation Method
- (2012) Chih-Hao Lu et al. PLoS One
- Exploration and Mining of the Bacterial Terpenome
- (2011) David E. Cane et al. ACCOUNTS OF CHEMICAL RESEARCH
- Terpene Biosynthesis: Modularity Rules
- (2011) Eric Oldfield et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Platensimycin and platencin: promising antibiotics for future application in human medicine
- (2011) Evan Martens et al. JOURNAL OF ANTIBIOTICS
- Structure and mechanism of the diterpene cyclase ent-copalyl diphosphate synthase
- (2011) Mustafa Köksal et al. Nature Chemical Biology
- Relative Solvent Accessible Surface Area Predicts Protein Conformational Changes upon Binding
- (2011) Joseph A. Marsh et al. STRUCTURE
- Improved side-chain torsion potentials for the Amber ff99SB protein force field
- (2010) Kresten Lindorff-Larsen et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Trinuclear metal clusters in catalysis by terpenoid synthases
- (2010) Julie A. Aaron et al. PURE AND APPLIED CHEMISTRY
- Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: Four approaches that performed well in CASP8
- (2009) Elmar Krieger et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Radius of gyration as an indicator of protein structure compactness
- (2008) M. Yu. Lobanov et al. MOLECULAR BIOLOGY
- An Improved General Amino Acid Replacement Matrix
- (2008) S. Q. Le et al. MOLECULAR BIOLOGY AND EVOLUTION
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started