Protein folding stabilities are a major determinant of oxidation rates for buried methionine residues

Highly accurate protein structure prediction with AlphaFold

(2021) John Jumper et al.   NATURE

Machine learning prediction of methionine and tryptophan photooxidation susceptibility

(2021) Jared A. Delmar et al.   Molecular Therapy-Methods & Clinical Development

Signal-regulated oxidation of proteins via MICAL

(2020) Clara Ortegón Salas et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

PFDB: A standardized protein folding database with temperature correction

(2019) Balachandran Manavalan et al.   Scientific Reports

Global analysis of methionine oxidation provides a census of folding stabilities for the human proteome

(2019) Ethan J. Walker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative Analysis of in Vivo Methionine Oxidation of the Human Proteome

(2019) John Q. Bettinger et al.   JOURNAL OF PROTEOME RESEARCH

Prediction of methionine oxidation risk in monoclonal antibodies using a machine learning method

(2018) Kannan Sankar et al.   mAbs

The PRIDE database and related tools and resources in 2019: improving support for quantification data

(2018) Yasset Perez-Riverol et al.   NUCLEIC ACIDS RESEARCH

Regulated methionine oxidation by monooxygenases

(2017) Bruno Manta et al.   FREE RADICAL BIOLOGY AND MEDICINE

Rapid assessment of oxidation via middle-down LCMS correlates with methionine side-chain solvent-accessible surface area for 121 clinical stage monoclonal antibodies

(2017) Rong Yang et al.   mAbs

Cell-wide analysis of protein thermal unfolding reveals determinants of thermostability

(2017) Pascal Leuenberger et al.   SCIENCE

Methionine residues around phosphorylation sites are preferentially oxidized in vivo under stress conditions

(2017) Francisco J. Veredas et al.   Scientific Reports

Thermal proteome profiling: unbiased assessment of protein state through heat-induced stability changes

(2016) André Mateus et al.   Proteome Science

Rigidity versus flexibility: the dilemma of understanding protein thermal stability

(2015) Andrey Karshikoff et al.   FEBS Journal

Folding the proteome

(2013) Esther Braselmann et al.   TRENDS IN BIOCHEMICAL SCIENCES

Methionine Oxidation Perturbs the Structural Core of the Prion Protein and Suggests a Generic Misfolding Pathway

(2012) Nadine D. Younan et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Methionine-aromatic Motif Plays a Unique Role in Stabilizing Protein Structure

(2012) Christopher C. Valley et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Residual metals cause variability in methionine oxidation measurements in protein pharmaceuticals using LC-UV/MS peptide mapping

(2012) Li Zang et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

Local Flexibility Facilitates Oxidization of Buried Methionine Residues

(2012) Kuiran Xu et al.   PROTEIN AND PEPTIDE LETTERS

Redox Proteomics of Protein-bound Methionine Oxidation

(2011) Bart Ghesquière et al.   MOLECULAR & CELLULAR PROTEOMICS

Stability of Human Growth Hormone: Influence of Methionine Oxidation on Thermal Folding

(2010) Filippo Mulinacci et al.   JOURNAL OF PHARMACEUTICAL SCIENCES

Thermodynamic Analysis of Protein Stability and Ligand Binding Using a Chemical Modification- and Mass Spectrometry-Based Strategy

(2008) Graham M. West et al.   ANALYTICAL CHEMISTRY

Structure and Stability Changes of Human IgG1 Fc as a Consequence of Methionine Oxidation

(2008) Dingjiang Liu et al.   BIOCHEMISTRY

A Dynamic Pathway for Calcium-Independent Activation of CaMKII by Methionine Oxidation

(2008) Jeffrey R. Erickson et al.   CELL

Considerations for the development of therapeutic monoclonal antibodies

(2008) Patrick G Swann et al.   CURRENT OPINION IN IMMUNOLOGY

Protein structure and dynamics studied by mass spectrometry: H/D exchange, hydroxyl radical labeling, and related approaches

(2008) Lars Konermann et al.   JOURNAL OF MASS SPECTROMETRY

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY