Compartment Niche Shapes the Assembly and Network of Cannabis sativa-Associated Microbiome

Correction to: Soil origin and plant genotype structure distinct microbiome compartments in the model legume Medicago truncatula

(2021) Shawn P. Brown et al.   Microbiome

Network analysis infers the wilt pathogen invasion associated with non-detrimental bacteria

(2020) Qiulong Hu et al.   npj Biofilms and Microbiomes

Cannabis Microbiome and the Role of Endophytes in Modulating the Production of Secondary Metabolites: An Overview

(2020) Meysam Taghinasab et al.   Microorganisms

Spatio-Temporal and Cultivar-Dependent Variations in the Cannabis Microbiome

(2020) Dominique Comeau et al.   Frontiers in Microbiology

Host selection shapes crop microbiome assembly and network complexity

(2020) Chao Xiong et al.   NEW PHYTOLOGIST

Effects of fairy ring fungi on plants and soil in the alpine and temperate grasslands of China

(2019) Chao Yang et al.   PLANT AND SOIL

Leaf and Root Endospheres Harbor Lower Fungal Diversity and Less Complex Fungal Co-occurrence Patterns Than Rhizosphere

(2019) Xin Qian et al.   Frontiers in Microbiology

Phyllosphere epiphytic and endophytic fungal community and network structures differ in a tropical mangrove ecosystem

(2019) Hui Yao et al.   Microbiome

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome

(2019) Víctor J. Carrión et al.   SCIENCE

Pathogens and Molds Affecting Production and Quality of Cannabis sativa L.

(2019) Zamir K. Punja et al.   Frontiers in Plant Science

Root-associated microbiomes of wheat under the combined effect of plant development and nitrogen fertilization

(2019) Shuaimin Chen et al.   Microbiome

Niche differentiation rather than biogeography shapes the diversity and composition of microbiome of Cycas panzhihuaensis

(2019) Ying Zheng et al.   Microbiome

A global atlas of the dominant bacteria found in soil

(2018) Manuel Delgado-Baquerizo et al.   SCIENCE

Assessing the origin of bacteria in tap water and distribution system in an unchlorinated drinking water system by SourceTracker using microbial community fingerprints

(2018) Gang Liu et al.   WATER RESEARCH

The Populus holobiont: dissecting the effects of plant niches and genotype on the microbiome

(2018) M. A. Cregger et al.   Microbiome

Rhizospheric microbial communities are driven by Panax ginseng at different growth stages and biocontrol bacteria alleviates replanting mortality

(2018) Linlin Dong et al.   Acta Pharmaceutica Sinica B

Cannabis sativa: A comprehensive ethnopharmacological review of a medicinal plant with a long history

(2018) Sara Anna Bonini et al.   JOURNAL OF ETHNOPHARMACOLOGY

Wheat rhizosphere harbors a less complex and more stable microbial co-occurrence pattern than bulk soil

(2018) Kunkun Fan et al.   SOIL BIOLOGY & BIOCHEMISTRY

The effects of host species and sexual dimorphism differ among root, leaf and flower microbiomes of wild strawberries in situ

(2018) Na Wei et al.   Scientific Reports

Diversity and composition of bacterial endophytes among plant parts of Panax notoginseng

(2018) Linlin Dong et al.   Chinese Medicine

Variation in the leaf and root microbiome of sugar maple (Acer saccharum) at an elevational range limit

(2018) Jessica Wallace et al.   PeerJ

Drought and host selection influence bacterial community dynamics in the grass root microbiome

(2017) Dan Naylor et al.   ISME Journal

Differential sharing and distinct co-occurrence networks among spatially close bacterial microbiota of bark, mosses and lichens‬‬

(2017) Ines Aline Aschenbrenner et al.   MOLECULAR ECOLOGY

Endophytic Bacteria Isolated from Panax ginseng Improves Ginsenoside Accumulation in Adventitious Ginseng Root Culture

(2017) et al.   MOLECULES

Huanglongbing impairs the rhizosphere-to-rhizoplane enrichment process of the citrus root-associated microbiome

(2017) Yunzeng Zhang et al.   Microbiome

Structural variability and niche differentiation in the rhizosphere and endosphere bacterial microbiome of field-grown poplar trees

(2017) Bram Beckers et al.   Microbiome

The Phyllosphere: Microbial Jungle at the Plant–Climate Interface

(2016) Corinne Vacher et al.   Annual Review of Ecology Evolution and Systematics

Formulation of bacterial consortia from avocado ( Persea americana Mill.) and their effect on growth, biomass and superoxide dismutase activity of wheat seedlings under salt stress

(2016) Patricio J. Barra et al.   APPLIED SOIL ECOLOGY

Editorial special issue: soil, plants and endophytes

(2016) Stéphane Compant et al.   PLANT AND SOIL

Host genotype and age shape the leaf and root microbiomes of a wild perennial plant

(2016) Maggie R. Wagner et al.   Nature Communications

Host species identity, site and time drive temperate tree phyllosphere bacterial community structure

(2016) Isabelle Laforest-Lapointe et al.   Microbiome

Soil bacterial and fungal community dynamics in relation to Panax notoginseng death rate in a continuous cropping system

(2016) Linlin Dong et al.   Scientific Reports

Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species

(2015) Devin Coleman-Derr et al.   NEW PHYTOLOGIST

An endophytic bacterium isolated from Panax ginseng C.A. Meyer enhances growth, reduces morbidity, and stimulates ginsenoside biosynthesis

(2015) Yugang Gao et al.   Phytochemistry Letters

The Soil Microbiome Influences Grapevine-Associated Microbiota

(2015) Iratxe Zarraonaindia et al.   mBio

Microbial population dynamics in response to Pectobacterium atrosepticum infection in potato tubers

(2015) Viia Kõiv et al.   Scientific Reports

Root microbiome relates to plant host evolution in maize and other Poaceae

(2014) Marie-Lara Bouffaud et al.   ENVIRONMENTAL MICROBIOLOGY

Understanding Cultivar-Specificity and Soil Determinants of the Cannabis Microbiome

(2014) Max E. Winston et al.   PLoS One

Longitudinal analysis of microbial interaction between humans and the indoor environment

(2014) S. Lax et al.   SCIENCE

Baseline survey of the anatomical microbial ecology of an important food plant: Solanum lycopersicum (tomato)

(2013) Andrea R Ottesen et al.   BMC MICROBIOLOGY

Use ofRhizobium leguminosarumas a potential biofertilizer forLactuca sativaandDaucus carotacrops

(2013) José D. Flores-Félix et al.   JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Protection of Arabidopsis thaliana against Leaf-Pathogenic Pseudomonas syringae by Sphingomonas Strains in a Controlled Model System

(2011) Gerd Innerebner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Endophytes of Grapevine Flowers, Berries, and Seeds: Identification of Cultivable Bacteria, Comparison with Other Plant Parts, and Visualization of Niches of Colonization

(2011) Stéphane Compant et al.   MICROBIAL ECOLOGY

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Annual Variations in the Diversity, Viability, and Origin of Airborne Bacteria

(2010) C. Fahlgren et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ascomycota has a faster evolutionary rate and higher species diversity than Basidiomycota

(2010) HaiYing Wang et al.   Science China-Life Sciences

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Cyanobacterial diversity in the rhizosphere of rice and its ecological significance

(2009) Radha Prasanna et al.   INDIAN JOURNAL OF MICROBIOLOGY

Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonization, mechanisms involved and prospects for utilization

(2009) Stéphane Compant et al.   SOIL BIOLOGY & BIOCHEMISTRY

Exploiting plant–microbe partnerships to improve biomass production and remediation

(2009) Nele Weyens et al.   TRENDS IN BIOTECHNOLOGY

Some Hidden Costs of Faculty Turnover in Clinical Departments in One Academic Medical Center

(2008) Ernest P. Schloss et al.   ACADEMIC MEDICINE

Phytochemical and genetic analyses of ancient cannabis from Central Asia

(2008) Ethan B. Russo et al.   JOURNAL OF EXPERIMENTAL BOTANY