标题
Whole-cell organelle segmentation in volume electron microscopy
作者
关键词
-
出版物
NATURE
Volume 599, Issue 7883, Pages 141-146
出版商
Springer Science and Business Media LLC
发表日期
2021-10-07
DOI
10.1038/s41586-021-03977-3
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Deep learning for automatic segmentation of the nuclear envelope in electron microscopy data, trained with volunteer segmentations
- (2021) Helen Spiers et al. TRAFFIC
- Automatic detection of synaptic partners in a whole-brain Drosophila electron microscopy data set
- (2021) Julia Buhmann et al. NATURE METHODS
- An open-access volume electron microscopy atlas of whole cells and tissues
- (2021) C. Shan Xu et al. NATURE
- Automatic segmentation of mitochondria and endolysosomes in volumetric electron microscopy data
- (2020) Manca Žerovnik Mekuč et al. COMPUTERS IN BIOLOGY AND MEDICINE
- Correlative three-dimensional super-resolution and block-face electron microscopy of whole vitreously frozen cells
- (2020) David P. Hoffman et al. SCIENCE
- Automatic Reconstruction of Mitochondria and Endoplasmic Reticulum in Electron Microscopy Volumes by Deep Learning
- (2020) Jing Liu et al. Frontiers in Neuroscience
- Visualizing and Interacting with Large Imaging Data
- (2019) Eric Perlman MICROSCOPY AND MICROANALYSIS
- Large Scale Image Segmentation with Structured Loss based Deep Learning for Connectome Reconstruction
- (2018) Jan Funke et al. IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE
- High-precision automated reconstruction of neurons with flood-filling networks
- (2018) Michał Januszewski et al. NATURE METHODS
- Multi-class segmentation of neuronal structures in electron microscopy images
- (2018) Kendrick Cetina et al. BMC BIOINFORMATICS
- The ESCRT-III Protein CHMP1A Mediates Secretion of Sonic Hedgehog on a Distinctive Subtype of Extracellular Vesicles
- (2018) Michael E. Coulter et al. Cell Reports
- Applying systems-level spectral imaging and analysis to reveal the organelle interactome
- (2017) Alex M. Valm et al. NATURE
- Automated synaptic connectivity inference for volume electron microscopy
- (2017) Sven Dorkenwald et al. NATURE METHODS
- Microtubule-Based Transport and the Distribution, Tethering, and Organization of Organelles
- (2017) Kari Barlan et al. Cold Spring Harbor Perspectives in Biology
- Enhanced FIB-SEM systems for large-volume 3D imaging
- (2017) C Shan Xu et al. eLife
- A Fast Method for the Segmentation of Synaptic Junctions and Mitochondria in Serial Electron Microscopic Images of the Brain
- (2016) Pablo Márquez Neila et al. NEUROINFORMATICS
- Increased spatiotemporal resolution reveals highly dynamic dense tubular matrices in the peripheral ER
- (2016) J. Nixon-Abell et al. SCIENCE
- Saturated Reconstruction of a Volume of Neocortex
- (2015) Narayanan Kasthuri et al. CELL
- Learning Structured Models for Segmentation of 2-D and 3-D Imagery
- (2015) Aurelien Lucchi et al. IEEE TRANSACTIONS ON MEDICAL IMAGING
- BigDataViewer: visualization and processing for large image data sets
- (2015) Tobias Pietzsch et al. NATURE METHODS
- A workflow for the automatic segmentation of organelles in electron microscopy image stacks
- (2014) Alex J. Perez et al. Frontiers in Neuroanatomy
- Untangling the web: Mechanisms underlying ER network formation
- (2013) Uma Goyal et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH
- Stacked Endoplasmic Reticulum Sheets Are Connected by Helicoidal Membrane Motifs
- (2013) Mark Terasaki et al. CELL
- Cellular Pathways of Hereditary Spastic Paraplegia
- (2012) Craig Blackstone Annual Review of Neuroscience
- Fiji: an open-source platform for biological-image analysis
- (2012) Johannes Schindelin et al. NATURE METHODS
- Automated Detection and Segmentation of Synaptic Contacts in Nearly Isotropic Serial Electron Microscopy Images
- (2011) Anna Kreshuk et al. PLoS One
- As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets
- (2010) S. Saalfeld et al. BIOINFORMATICS
- elastix: A Toolbox for Intensity-Based Medical Image Registration
- (2009) S. Klein et al. IEEE TRANSACTIONS ON MEDICAL IMAGING
- Convolutional Networks Can Learn to Generate Affinity Graphs for Image Segmentation
- (2009) Srinivas C. Turaga et al. NEURAL COMPUTATION
- Automatic joint classification and segmentation of whole cell 3D images
- (2008) Rajesh Narasimha et al. PATTERN RECOGNITION
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