Microbial diversity of the soil, rhizosphere and wine from an emerging wine-producing region of Argentina

Characterization of Microbial Dynamics and Volatile Metabolome Changes During Fermentation of Chambourcin Hybrid Grapes From Two Pennsylvania Regions

(2021) Hung Li Wang et al.   Frontiers in Microbiology

Influence of vintage, geographic location and cultivar on the structure of microbial communities associated with the grapevine rhizosphere in vineyards of San Juan Province, Argentina

(2020) Mónica Oyuela Aguilar et al.   PLoS One

Vineyard Soil Microbiome Composition Related to Rotundone Concentration in Australian Cool Climate ‘Peppery’ Shiraz Grapes

(2019) Vadakattu V. S. R. Gupta et al.   Frontiers in Microbiology

A Metagenomic-Based Approach for the Characterization of Bacterial Diversity Associated with Spontaneous Malolactic Fermentations in Wine

(2019) Carmen Berbegal et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

From the Vineyard to the Winery: How Microbial Ecology Drives Regional Distinctiveness of Wine

(2019) Di Liu et al.   Frontiers in Microbiology

Small scale fungal community differentiation in a vineyard system

(2019) Sarah J. Knight et al.   FOOD MICROBIOLOGY

Involvement of Dactylonectria and Ilyonectria spp. in tree decline affecting multi-generation apple orchards

(2018) Luisa M. Manici et al.   PLANT AND SOIL

Metagenomic Approaches to Investigate the Contribution of the Vineyard Environment to the Quality of Wine Fermentation: Potentials and Difficulties

(2018) Irene Stefanini et al.   Frontiers in Microbiology

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

Drought and host selection influence bacterial community dynamics in the grass root microbiome

(2017) Dan Naylor et al.   ISME Journal

From Vineyard Soil to Wine Fermentation: Microbiome Approximations to Explain the “terroir” Concept

(2017) Ignacio Belda et al.   Frontiers in Microbiology

The Grapevine and Wine Microbiome: Insights from High-Throughput Amplicon Sequencing

(2017) Horatio H. Morgan et al.   Frontiers in Microbiology

Analysis of microbial diversity and dynamics during wine fermentation of Grenache grape variety by high-throughput barcoding sequencing

(2016) Maria del Carmen Portillo et al.   LWT-FOOD SCIENCE AND TECHNOLOGY

Vineyard soil bacterial diversity and composition revealed by 16S rRNA genes: Differentiation by vineyard management

(2016) Kayla N. Burns et al.   SOIL BIOLOGY & BIOCHEMISTRY

Associations among Wine Grape Microbiome, Metabolome, and Fermentation Behavior Suggest Microbial Contribution to Regional Wine Characteristics

(2016) Nicholas A. Bokulich et al.   mBio

Unraveling the Enzymatic Basis of Wine “Flavorome”: A Phylo-Functional Study of Wine Related Yeast Species

(2016) Ignacio Belda et al.   Frontiers in Microbiology

Emerging DNA-based technologies to characterize food ecosystems

(2015) Andrea Galimberti et al.   FOOD RESEARCH INTERNATIONAL

Vineyard soil bacterial diversity and composition revealed by 16S rRNA genes: Differentiation by geographic features

(2015) Kayla N. Burns et al.   SOIL BIOLOGY & BIOCHEMISTRY

The Soil Microbiome Influences Grapevine-Associated Microbiota

(2015) Iratxe Zarraonaindia et al.   mBio

Regional microbial signatures positively correlate with differential wine phenotypes: evidence for a microbial aspect to terroir

(2015) Sarah Knight et al.   Scientific Reports

Insights into the bacterial community and its temporal succession during the fermentation of wine grapes

(2015) Hailan Piao et al.   Frontiers in Microbiology

Wine fermentation microbiome: a landscape from different Portuguese wine appellations

(2015) Cátia Pinto et al.   Frontiers in Microbiology

Bacterial communities in the rhizosphere of Vitis vinifera L. cultivated under distinct agricultural practices in Argentina

(2014) A. D. Vega-Avila et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Estimating coverage in metagenomic data sets and why it matters

(2014) Luis M Rodriguez-R et al.   ISME Journal

Functional congruence of rhizosphere microbial communities associated to leguminous tree from Brazilian semiarid region

(2014) Rodrigo Gouvêa Taketani et al.   Environmental Microbiology Reports

High-Throughput Sequencing and Metagenomics: Moving Forward in the Culture-Independent Analysis of Food Microbial Ecology

(2013) Danilo Ercolini   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Monitoring Seasonal Changes in Winery-Resident Microbiota

(2013) Nicholas A. Bokulich et al.   PLoS One

PNAS Plus: From the Cover: Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate

(2013) N. A. Bokulich et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Next-Generation Sequencing Reveals Significant Bacterial Diversity of Botrytized Wine

(2012) Nicholas A. Bokulich et al.   PLoS One

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

(2012) Daniel McDonald et al.   GigaScience

The microbial ecology of wine grape berries

(2011) A. Barata et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Long-Term Phosphorus Fertilization Impacts Soil Fungal and Bacterial Diversity but not AM Fungal Community in Alfalfa

(2009) M. S. Beauregard et al.   MICROBIAL ECOLOGY

Effect of oenological practices on microbial populations using culture-independent techniques

(2008) Imma Andorrà et al.   FOOD MICROBIOLOGY