Influence of vintage, geographic location and cultivar on the structure of microbial communities associated with the grapevine rhizosphere in vineyards of San Juan Province, Argentina
出版年份 2020 全文链接
标题
Influence of vintage, geographic location and cultivar on the structure of microbial communities associated with the grapevine rhizosphere in vineyards of San Juan Province, Argentina
作者
关键词
Rhizosphere, Bacteria, Agricultural soil science, Grapevine, Microbiome, Ribosomal RNA, Fungal structure, Wine
出版物
PLoS One
Volume 15, Issue 12, Pages e0243848
出版商
Public Library of Science (PLoS)
发表日期
2020-12-15
DOI
10.1371/journal.pone.0243848
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Seasonal epiphytic microbial dynamics on grapevine leaves under biocontrol and copper fungicide treatments
- (2020) Alex Gobbi et al. Scientific Reports
- Plant Growth Promoting Traits of Indigenous Phosphate Solubilizing Pseudomonas aeruginosa Isolates from Chilli (Capsicumannuum L.) Rhizosphere
- (2019) M. S. Linu et al. COMMUNICATIONS IN SOIL SCIENCE AND PLANT ANALYSIS
- Quantitative and qualitative evaluation of the impact of the G2 enhancer, bead sizes and lysing tubes on the bacterial community composition during DNA extraction from recalcitrant soil core samples based on community sequencing and qPCR
- (2019) Alex Gobbi et al. PLoS One
- Vineyard Soil Microbiome Composition Related to Rotundone Concentration in Australian Cool Climate ‘Peppery’ Shiraz Grapes
- (2019) Vadakattu V. S. R. Gupta et al. Frontiers in Microbiology
- Phytohormones, miRNAs, and peptide signals integrate plant phosphorus status with arbuscular mycorrhizal symbiosis
- (2019) Lena M Müller et al. CURRENT OPINION IN PLANT BIOLOGY
- Characterization of the Wood Mycobiome of Vitis vinifera in a Vineyard Affected by Esca. Spatial Distribution of Fungal Communities and Their Putative Relation With Leaf Symptoms
- (2019) Giovanni Del Frari et al. Frontiers in Plant Science
- Understanding the phyllosphere microbiome assemblage in grape species (Vitaceae) with amplicon sequence data structures
- (2019) Prashant Singh et al. Scientific Reports
- Fungicides and the Grapevine Wood Mycobiome: A Case Study on Tracheomycotic Ascomycete Phaeomoniella chlamydospora Reveals Potential for Two Novel Control Strategies
- (2019) Giovanni Del Frari et al. Frontiers in Plant Science
- High-throughput sequencing of microbial community diversity in soil, grapes, leaves, grape juice and wine of grapevine from China
- (2018) Yu-jie Wei et al. PLoS One
- Vineyard under-vine floor management alters soil microbial composition, while the fruit microbiome shows no corresponding shifts
- (2018) Ming-Yi Chou et al. Scientific Reports
- Fungal Biodiversity and Their Role in Soil Health
- (2018) Magdalena Frąc et al. Frontiers in Microbiology
- Grapevine rootstocks shape underground bacterial microbiome and networking but not potential functionality
- (2018) Ramona Marasco et al. Microbiome
- The Rhizosphere Bacterial Microbiota of Vitis vinifera cv. Pinot Noir in an Integrated Pest Management Vineyard
- (2017) Giorgia Novello et al. Frontiers in Microbiology
- From Vineyard Soil to Wine Fermentation: Microbiome Approximations to Explain the “terroir” Concept
- (2017) Ignacio Belda et al. Frontiers in Microbiology
- Microbial Phosphorus Solubilization and Its Potential for Use in Sustainable Agriculture
- (2017) Elizabeth T. Alori et al. Frontiers in Microbiology
- The Role of Soil Microorganisms in Plant Mineral Nutrition—Current Knowledge and Future Directions
- (2017) Richard Jacoby et al. Frontiers in Plant Science
- Rhea: a transparent and modular R pipeline for microbial profiling based on 16S rRNA gene amplicons
- (2017) Ilias Lagkouvardos et al. PeerJ
- Structural variability and niche differentiation in the rhizosphere and endosphere bacterial microbiome of field-grown poplar trees
- (2017) Bram Beckers et al. Microbiome
- Vineyard soil bacterial diversity and composition revealed by 16S rRNA genes: Differentiation by vineyard management
- (2016) Kayla N. Burns et al. SOIL BIOLOGY & BIOCHEMISTRY
- The Soil-Borne Supremacy
- (2016) Corné M.J. Pieterse et al. TRENDS IN PLANT SCIENCE
- Outlining the influence of non-conventional yeasts in wine ageing over lees
- (2016) Ignacio Belda et al. YEAST
- Associations among Wine Grape Microbiome, Metabolome, and Fermentation Behavior Suggest Microbial Contribution to Regional Wine Characteristics
- (2016) Nicholas A. Bokulich et al. mBio
- Arbuscular mycorrhiza symbiosis in viticulture: a review
- (2015) Sophie Trouvelot et al. Agronomy for Sustainable Development
- Error filtering, pair assembly and error correction for next-generation sequencing reads
- (2015) Robert C. Edgar et al. BIOINFORMATICS
- Vineyard soil bacterial diversity and composition revealed by 16S rRNA genes: Differentiation by geographic features
- (2015) Kayla N. Burns et al. SOIL BIOLOGY & BIOCHEMISTRY
- Functions, mechanisms and regulation of endophytic and epiphytic microbial communities of plants
- (2015) Charles W. Bacon et al. SYMBIOSIS
- Regional microbial signatures positively correlate with differential wine phenotypes: evidence for a microbial aspect to terroir
- (2015) Sarah Knight et al. Scientific Reports
- Sequence-based Analysis of the Vitis vinifera L. cv Cabernet Sauvignon Grape Must Mycobiome in Three South African Vineyards Employing Distinct Agronomic Systems
- (2015) Mathabatha E. Setati et al. Frontiers in Microbiology
- Plant growth promotion induced by phosphate solubilizing endophytic Pseudomonas isolates
- (2015) Nicholas Oteino et al. Frontiers in Microbiology
- Bacterial communities in the rhizosphere of Vitis vinifera L. cultivated under distinct agricultural practices in Argentina
- (2014) A. D. Vega-Avila et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Resilience of the Natural Phyllosphere Microbiota of the Grapevine to Chemical and Biological Pesticides
- (2014) Michele Perazzolli et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Rhizobium rhizoryzae sp. nov., isolated from rice roots
- (2014) X.-X. Zhang et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Soil Nutrient Content Influences the Abundance of Soil Microbes but Not Plant Biomass at the Small-Scale
- (2014) Kadri Koorem et al. PLoS One
- Unravelling the Diversity of Grapevine Microbiome
- (2014) Cátia Pinto et al. PLoS One
- Development of a Prokaryotic Universal Primer for Simultaneous Analysis of Bacteria and Archaea Using Next-Generation Sequencing
- (2014) Shunsuke Takahashi et al. PLoS One
- Bacterial Endophytic Communities in the Grapevine Depend on Pest Management
- (2014) Andrea Campisano et al. PLoS One
- Effect of the soil type on the microbiome in the rhizosphere of field-grown lettuce
- (2014) Susanne Schreiter et al. Frontiers in Microbiology
- UPARSE: highly accurate OTU sequences from microbial amplicon reads
- (2013) Robert C Edgar NATURE METHODS
- Microbial terroir for wine grapes
- (2013) J. A. Gilbert et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- PNAS Plus: From the Cover: Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate
- (2013) N. A. Bokulich et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Associating microbiome composition with environmental covariates using generalized UniFrac distances
- (2012) Jun Chen et al. BIOINFORMATICS
- Distribution and diversity of arbuscular mycorrhizal fungi in grapevines from production vineyards along the eastern Adriatic coast
- (2012) Matevž Likar et al. MYCORRHIZA
- The Vineyard Yeast Microbiome, a Mixed Model Microbial Map
- (2012) Mathabatha Evodia Setati et al. PLoS One
- Restructuring of Endophytic Bacterial Communities in Grapevine Yellows-Diseased and Recovered Vitis vinifera L. Plants
- (2011) Daniela Bulgari et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Abundance, diversity and prospecting of culturable phosphate solubilizing bacteria on soils under crop–pasture rotations in a no-tillage regime in Uruguay
- (2011) Gastón Azziz et al. APPLIED SOIL ECOLOGY
- The microbial ecology of wine grape berries
- (2011) A. Barata et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- Phosphate-solubilization mechanism and in vitro plant growth promotion activity mediated by Pantoea eucalypti isolated from Lotus tenuis rhizosphere in the Salado River Basin (Argentina)
- (2011) L.N. Castagno et al. JOURNAL OF APPLIED MICROBIOLOGY
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Cohorts of arbuscular mycorrhizal fungi (AMF) in Vitis vinifera, a typical Mediterranean fruit crop
- (2010) Raffaella Balestrini et al. Environmental Microbiology Reports
- The diversity of arbuscular mycorrhizal fungi amplified from grapevine roots (Vitis vinifera L.) in Oregon vineyards is seasonally stable and influenced by soil and vine age
- (2009) R. Paul Schreiner et al. MYCOLOGIA
- DNA-based species level detection ofGlomeromycota: one PCR primer set for all arbuscular mycorrhizal fungi
- (2009) Manuela Krüger et al. NEW PHYTOLOGIST
- Soil morphology, depth and grapevine root frequency influence microbial communities in a Pinot noir vineyard
- (2007) K.L. Steenwerth et al. SOIL BIOLOGY & BIOCHEMISTRY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started