Approaching Protein Barriers: Emerging Mechanisms of Replication Pausing in Eukaryotes
出版年份 2021 全文链接
标题
Approaching Protein Barriers: Emerging Mechanisms of Replication Pausing in Eukaryotes
作者
关键词
-
出版物
Frontiers in Cell and Developmental Biology
Volume 9, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2021-05-28
DOI
10.3389/fcell.2021.672510
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Single-strand DNA breaks cause replisome disassembly
- (2021) Kyle B. Vrtis et al. MOLECULAR CELL
- Tracking break-induced replication shows that it stalls at roadblocks
- (2021) Liping Liu et al. NATURE
- Replication dynamics of recombination-dependent replication forks
- (2021) Karel Naiman et al. Nature Communications
- Top1 and Top2 promote replication fork arrest at a programmed pause site
- (2020) Mélanie V. Larcher et al. GENES & DEVELOPMENT
- Determinants of Replication-Fork Pausing at tRNA Genes in Saccharomyces cerevisiae
- (2020) Rani Yeung et al. GENETICS
- Proteomic Analysis of DNA Synthesis on a Structured DNA Template in Human Cellular Extracts: Interplay Between NHEJ and Replication‐Associated Proteins
- (2020) Régine Janel‐Bintz et al. PROTEOMICS
- Cryo-EM Structure of the Fork Protection Complex Bound to CMG at a Replication Fork
- (2020) Domagoj Baretić et al. MOLECULAR CELL
- CryoEM structures of human CMG–ATPγS–DNA and CMG–AND-1 complexes
- (2020) Neil J Rzechorzek et al. NUCLEIC ACIDS RESEARCH
- Timeless couples G‐quadruplex detection with processing by DDX 11 helicase during DNA replication
- (2020) Leticia K Lerner et al. EMBO JOURNAL
- Moving fast and breaking things: Incidence and repair of DNA damage within ribosomal DNA repeats
- (2020) Yana P. Blokhina et al. MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS
- Structure of the polymerase ε holoenzyme and atomic model of the leading strand replisome
- (2020) Zuanning Yuan et al. Nature Communications
- Duplex DNA engagement and RPA oppositely regulate the DNA-unwinding rate of CMG helicase
- (2020) Hazal B. Kose et al. Nature Communications
- Pif1, RPA and FEN1 modulate the ability of DNA polymerase δ to overcome protein barriers during DNA synthesis
- (2020) Melanie A Sparks et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Single-molecule imaging reveals control of parental histone recycling by free histones during DNA replication
- (2020) D. T. Gruszka et al. Science Advances
- SLX4–XPF mediates DNA damage responses to replication stress induced by DNA–protein interactions
- (2020) Riko Ishimoto et al. JOURNAL OF CELL BIOLOGY
- Catalytically inactive Cas9 impairs DNA replication fork progression to induce focal genomic instability
- (2020) Goro Doi et al. NUCLEIC ACIDS RESEARCH
- Replisome bypass of a protein-based R-loop block by Pif1
- (2020) Grant D. Schauer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- RNA Polymerase I Activators Count and Adjust Ribosomal RNA Gene Copy Number
- (2019) Tetsushi Iida et al. MOLECULAR CELL
- Overexpression of Claspin and Timeless protects cancer cells from replication stress in a checkpoint-independent manner
- (2019) Julien N. Bianco et al. Nature Communications
- How do cells count multi-copy genes?: “Musical Chair” model for preserving the number of rDNA copies
- (2019) Tetsushi Iida et al. CURRENT GENETICS
- Transcription-mediated replication hindrance: a major driver of genome instability
- (2019) Belén Gómez-González et al. GENES & DEVELOPMENT
- Capturing the dynamics of genome replication on individual ultra-long nanopore sequence reads
- (2019) Carolin A. Müller et al. NATURE METHODS
- Replication fork pausing at protein barriers on chromosomes
- (2019) Kohji Hizume et al. FEBS LETTERS
- Molecular Basis for ATP-Hydrolysis-Driven DNA Translocation by the CMG Helicase of the Eukaryotic Replisome
- (2019) Patrik Eickhoff et al. Cell Reports
- Synergistic Coordination of Chromatin Torsional Mechanics and Topoisomerase Activity
- (2019) Tung T. Le et al. CELL
- Nuclease dead Cas9 is a programmable roadblock for DNA replication
- (2019) Kelsey S. Whinn et al. Scientific Reports
- Fork pausing complex engages topoisomerases at the replisome
- (2019) Maksym Shyian et al. GENES & DEVELOPMENT
- Common Features of the Pericentromere and Nucleolus
- (2019) Colleen J. Lawrimore et al. Genes
- DNA polymerase ε-dependent modulation of the pausing property of the CMG helicase at the barrier
- (2018) Kohji Hizume et al. GENES & DEVELOPMENT
- High speed of fork progression induces DNA replication stress and genomic instability
- (2018) Apolinar Maya-Mendoza et al. NATURE
- The CMG Helicase Bypasses DNA-Protein Cross-Links to Facilitate Their Repair
- (2018) Justin L. Sparks et al. CELL
- Fork pausing allows centromere DNA loop formation and kinetochore assembly
- (2018) Diana M. Cook et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Sap1 is a replication-initiation factor essential for the assembly of pre-replicative complex in the fission yeastSchizosaccharomyces pombe
- (2017) Ling Guan et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Unprotected Replication Forks Are Converted into Mitotic Sister Chromatid Bridges
- (2017) Anissia Ait Saada et al. MOLECULAR CELL
- How the Eukaryotic Replisome Achieves Rapid and Efficient DNA Replication
- (2017) Joseph T.P. Yeeles et al. MOLECULAR CELL
- Mechanisms of DNA replication termination
- (2017) James M. Dewar et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Mechanisms of DNA–protein crosslink repair
- (2017) Julian Stingele et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Single-molecule visualization ofSaccharomyces cerevisiaeleading-strand synthesis reveals dynamic interaction between MTC and the replisome
- (2017) Jacob S. Lewis et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Redox-sensitive alteration of replisome architecture safeguards genome integrity
- (2017) Kumar Somyajit et al. SCIENCE
- PIF1 family DNA helicases suppress R-loop mediated genome instability at tRNA genes
- (2017) Phong Lan Thao Tran et al. Nature Communications
- Action of CMG with strand-specific DNA blocks supports an internal unwinding mode for the eukaryotic replicative helicase
- (2017) Lance Langston et al. eLife
- Functional mapping of yeast genomes by saturated transposition
- (2017) Agnès H Michel et al. eLife
- Regulation of DNA Replication through Natural Impediments in the Eukaryotic Genome
- (2017) Mariana Gadaleta et al. Genes
- Forks on the Run: Can the Stalling of DNA Replication Promote Epigenetic Changes?
- (2017) Hollie Rowlands et al. Frontiers in Genetics
- Quantitative BrdU immunoprecipitation method demonstrates that Fkh1 and Fkh2 are rate-limiting activators of replication origins that reprogram replication timing in G1 phase
- (2016) Jared M. Peace et al. GENOME RESEARCH
- Pif1-family helicases cooperatively suppress widespread replication-fork arrest at tRNA genes
- (2016) Joseph S Osmundson et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Phosphorylation of CMG helicase and Tof1 is required for programmed fork arrest
- (2016) Deepak Bastia et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Pif1-family helicases cooperatively suppress widespread replication-fork arrest at tRNA genes
- (2016) Joseph S Osmundson et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Budding Yeast Rif1 Controls Genome Integrity by Inhibiting rDNA Replication
- (2016) Maksym Shyian et al. PLoS Genetics
- The Causes and Consequences of Topological Stress during DNA Replication
- (2016) Andrea Keszthelyi et al. Genes
- “Breaking Up Is Hard to Do”: The Formation and Resolution of Sister Chromatid Intertwines
- (2015) Jonathan Baxter JOURNAL OF MOLECULAR BIOLOGY
- The Human RNA Polymerase I Transcription Terminator Complex Acts as a Replication Fork Barrier That Coordinates the Progress of Replication with rRNA Transcription Activity
- (2015) Yufuko Akamatsu et al. MOLECULAR AND CELLULAR BIOLOGY
- Timeless Interacts with PARP-1 to Promote Homologous Recombination Repair
- (2015) Si Xie et al. MOLECULAR CELL
- Essential Roles of the Smc5/6 Complex in Replication through Natural Pausing Sites and Endogenous DNA Damage Tolerance
- (2015) Demis Menolfi et al. MOLECULAR CELL
- Replisome speed determines the efficiency of the Tus−Ter replication termination barrier
- (2015) Mohamed M. Elshenawy et al. NATURE
- Fork rotation and DNA precatenation are restricted during DNA replication to prevent chromosomal instability
- (2015) Stephanie A. Schalbetter et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Checkpoints are blind to replication restart and recombination intermediates that result in gross chromosomal rearrangements
- (2015) Saed Mohebi et al. Nature Communications
- Binding of Multiple Rap1 Proteins Stimulates Chromosome Breakage Induction during DNA Replication
- (2015) Greicy H. Goto et al. PLoS Genetics
- Temporospatial Coordination of Meiotic DNA Replication and Recombination via DDK Recruitment to Replisomes
- (2014) Hajime Murakami et al. CELL
- Tipin Functions in the Protection against Topoisomerase I Inhibitor
- (2014) Yoshifumi Hosono et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- To peep into Pif1 helicase: Multifaceted all the way from genome stability to repair-associated DNA synthesis
- (2014) Woo-Hyun Chung JOURNAL OF MICROBIOLOGY
- BRCA1 controls homologous recombination at Tus/Ter-stalled mammalian replication forks
- (2014) Nicholas A. Willis et al. NATURE
- Reversible Top1 cleavage complexes are stabilized strand-specifically at the ribosomal replication fork barrier and contribute to ribosomal DNA stability
- (2014) Claudia Krawczyk et al. NUCLEIC ACIDS RESEARCH
- Rif1 Regulates Initiation Timing of Late Replication Origins throughout the S. cerevisiae Genome
- (2014) Jared M. Peace et al. PLoS One
- Ribosomal RNA gene repeats, their stability and cellular senescence
- (2014) Takehiko KOBAYASHI PROCEEDINGS OF THE JAPAN ACADEMY SERIES B-PHYSICAL AND BIOLOGICAL SCIENCES
- Mechanism and physiological significance of programmed replication termination
- (2014) Deepak Bastia et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- The Escherichia coli Tus–Ter replication fork barrier causes site-specific DNA replication perturbation in yeast
- (2014) Nicolai B. Larsen et al. Nature Communications
- Impediments to replication fork movement: stabilisation, reactivation and genome instability
- (2013) Sarah Lambert et al. CHROMOSOMA
- The level of origin firing inversely affects the rate of replication fork progression
- (2013) Yuan Zhong et al. JOURNAL OF CELL BIOLOGY
- FANCJ couples replication past natural fork barriers with maintenance of chromatin structure
- (2013) Rebekka A. Schwab et al. JOURNAL OF CELL BIOLOGY
- Quantitative, Genome-Wide Analysis of Eukaryotic Replication Initiation and Termination
- (2013) Sean R. McGuffee et al. MOLECULAR CELL
- A solution to release twisted DNA during chromosome replication by coupled DNA polymerases
- (2013) Isabel Kurth et al. NATURE
- Pif1 helicase and Polδ promote recombination-coupled DNA synthesis via bubble migration
- (2013) Marenda A. Wilson et al. NATURE
- Transcription-generated torsional stress destabilizes nucleosomes
- (2013) Sheila S Teves et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- MRX protects fork integrity at protein–DNA barriers, and its absence causes checkpoint activation dependent on chromatin context
- (2013) Iben B. Bentsen et al. NUCLEIC ACIDS RESEARCH
- Human Tim-Tipin complex affects the biochemical properties of the replicative DNA helicase and DNA polymerases
- (2013) W.-H. Cho et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- RTEL1 Is a Replisome-Associated Helicase That Promotes Telomere and Genome-Wide Replication
- (2013) J.-B. Vannier et al. SCIENCE
- Replisome Stability at Defective DNA Replication Forks Is Independent of S Phase Checkpoint Kinases
- (2012) Giacomo De Piccoli et al. MOLECULAR CELL
- DNA Replication through G-Quadruplex Motifs Is Promoted by the Saccharomyces cerevisiae Pif1 DNA Helicase
- (2011) Katrin Paeschke et al. CELL
- The many facets of the Tim-Tipin protein families’ roles in chromosome biology
- (2011) Ramsay J. McFarlane et al. CELL CYCLE
- Evolutionary divergence of intrinsic and trans-regulated nucleosome positioning sequences reveals plastic rules for chromatin organization
- (2011) A. Tsankov et al. GENOME RESEARCH
- Overcoming natural replication barriers: differential helicase requirements
- (2011) Ranjith P. Anand et al. NUCLEIC ACIDS RESEARCH
- DNA ligase 4 stabilizes the ribosomal DNA array upon fork collapse at the replication fork barrier
- (2010) Olivier Fritsch et al. DNA REPAIR
- Selective ploidy ablation, a high-throughput plasmid transfer protocol, identifies new genes affecting topoisomerase I-induced DNA damage
- (2010) R. J. D. Reid et al. GENOME RESEARCH
- Replication Termination at Eukaryotic Chromosomes Is Mediated by Top2 and Occurs at Genomic Loci Containing Pausing Elements
- (2010) Daniele Fachinetti et al. MOLECULAR CELL
- GINS motion reveals replication fork progression is remarkably uniform throughout the yeast genome
- (2010) Matthew D Sekedat et al. Molecular Systems Biology
- Analysis of replication profiles reveals key role of RFC-Ctf18 in yeast replication stress response
- (2010) Laure Crabbé et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Abundance of Ribosomal RNA Gene Copies Maintains Genome Integrity
- (2010) S. Ide et al. SCIENCE
- Mammalian Telomeres Resemble Fragile Sites and Require TRF1 for Efficient Replication
- (2009) Agnel Sfeir et al. CELL
- Csm3, Tof1, and Mrc1 Form a Heterotrimeric Mediator Complex That Associates with DNA Replication Forks
- (2009) Masashige Bando et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Highly Transcribed RNA Polymerase II Genes Are Impediments to Replication Fork Progression in Saccharomyces cerevisiae
- (2009) Anna Azvolinsky et al. MOLECULAR CELL
- Cohesin acetylation speeds the replication fork
- (2009) Marie-Emilie Terret et al. NATURE
- Replisome stalling and stabilization at CGG repeats, which are responsible for chromosomal fragility
- (2009) Irina Voineagu et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Pericentric Chromatin Is Organized into an Intramolecular Loop in Mitosis
- (2008) Elaine Yeh et al. CURRENT BIOLOGY
- Mrc1 and DNA Polymerase ɛ Function Together in Linking DNA Replication and the S Phase Checkpoint
- (2008) Huiqiang Lou et al. MOLECULAR CELL
- Replication stalling at unstable inverted repeats: Interplay between DNA hairpins and fork stabilizing proteins
- (2008) I. Voineagu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search