Exploring the Microdiversity Within Marine Bacterial Taxa: Toward an Integrated Biogeography in the Southern Ocean

Disentangling the Relative Roles of Vertical Transmission, Subsequent Colonizations, and Diet on Cockroach Microbiome Assembly

(2021) Justinn Renelies-Hamilton et al.   mSphere

Microbiome reduction and endosymbiont gain from a switch in sea urchin life history

(2021) Tyler J. Carrier et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of the Gut Microbiota of the Antarctic Heart Urchin (Spatangoida) Abatus agassizii

(2020) Guillaume Schwob et al.   Frontiers in Microbiology

Experimental assembly reveals ecological drift as a major driver of root nodule bacterial diversity in a woody legume crop

(2020) Josep Ramoneda et al.   FEMS MICROBIOLOGY ECOLOGY

Disentangling the mechanisms shaping the surface ocean microbiota

(2020) Ramiro Logares et al.   Microbiome

Oceanic Hitchhikers – Assessing Pathogen Risks from Marine Microplastic

(2020) Jake Bowley et al.   TRENDS IN MICROBIOLOGY

Stochastic Dispersal Rather Than Deterministic Selection Explains the Spatio-Temporal Distribution of Soil Bacteria in a Temperate Grassland

(2020) Tim Richter-Heitmann et al.   Frontiers in Microbiology

Soil Bacterial Communities Exhibit Strong Biogeographic Patterns at Fine Taxonomic Resolution

(2020) Sean K. Bay et al.   mSystems

The Antarctic Circumpolar Current as a dispersive agent in the Southern Ocean: evidence from bivalves

(2020) Marina Güller et al.   MARINE BIOLOGY

The biogeography of Streptomyces in New Zealand enabled by high‐throughput sequencing of genus‐specific rpoB amplicons

(2020) S. A. Higgins et al.   ENVIRONMENTAL MICROBIOLOGY

The Microbial Conveyor Belt: Connecting the Globe through Dispersion and Dormancy

(2020) Mireia Mestre et al.   TRENDS IN MICROBIOLOGY

Factors influencing aquatic and terrestrial bacterial community assembly

(2019) Silke Langenheder et al.   Environmental Microbiology Reports

Historical Factors Associated With Past Environments Influence the Biogeography of Thermophilic Endospores in Arctic Marine Sediments

(2019) China A. Hanson et al.   Frontiers in Microbiology

Bacterial community dynamics during embryonic and larval development of three confamilial echinoids

(2019) TJ Carrier et al.   MARINE ECOLOGY PROGRESS SERIES

Global diversity and biogeography of bacterial communities in wastewater treatment plants

(2019) Linwei Wu et al.   Nature Microbiology

More than the eye can see: Genomic insights into the drivers of genetic differentiation in Royal/Macaroni penguins across the Southern Ocean

(2019) María José Frugone et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

From metabarcoding to metaphylogeography: separating the wheat from the chaff

(2019) Xavier Turon et al.   ECOLOGICAL APPLICATIONS

Contrasting prevalence of selection and drift in the community structuring of bacteria and microbial eukaryotes

(2018) Ramiro Logares et al.   ENVIRONMENTAL MICROBIOLOGY

Unexpected absence of island endemics: Long-distance dispersal in higher latitude sub-Antarctic Siphonaria (Gastropoda: Euthyneura) species

(2018) Claudio A. González-Wevar et al.   JOURNAL OF BIOGEOGRAPHY

Benthic species of the Kerguelen Plateau show contrasting distribution shifts in response to environmental changes

(2018) Charlène Guillaumot et al.   Ecology and Evolution

Distinct Oceanic Microbiomes From Viruses to Protists Located Near the Antarctic Circumpolar Current

(2018) Flavia Flaviani et al.   Frontiers in Microbiology

Multiple Ribosomal RNA Operons in Bacteria; Their Concerted Evolution and Potential Consequences on the Rate of Evolution of Their 16S rRNA

(2018) Romilio T. Espejo et al.   Frontiers in Microbiology

Biogeography of soil bacteria and archaea across France

(2018) Battle Karimi et al.   Science Advances

Oceanographic boundaries constrain microbial diversity gradients in the South Pacific Ocean

(2018) Eric J. Raes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Macroecology to Unite All Life, Large and Small

(2018) Ashley Shade et al.   TRENDS IN ECOLOGY & EVOLUTION

Challenging Dogma Concerning Biogeographic Patterns of Antarctica and the Southern Ocean

(2018) Kenneth M. Halanych et al.   Annual Review of Ecology Evolution and Systematics

The Variable Southern Ocean Carbon Sink

(2018) Nicolas Gruber et al.   Annual Review of Marine Science

Two key features influencing community assembly processes at regional scale: Initial state and degree of change in environmental conditions

(2018) Youzhi Feng et al.   MOLECULAR ECOLOGY

Summer shifts of bacterial communities associated with the invasive brown seaweed Sargassum muticum are location and tissue dependent

(2018) Alexandra Serebryakova et al.   PLoS One

Systematic revision of Nacella (Patellogastropoda: Nacellidae) based on a complete phylogeny of the genus, with the description of a new species from the southern tip of South America

(2018) Claudio A González-Wevar et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Bio-ORACLE v2.0: Extending marine data layers for bioclimatic modelling

(2017) Jorge Assis et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Diversity and community composition of particle-associated and free-living bacteria in mesopelagic and bathypelagic Southern Ocean water masses: Evidence of dispersal limitation in the Bransfield Strait

(2017) Mathias Milici et al.   LIMNOLOGY AND OCEANOGRAPHY

Stochastic Community Assembly: Does It Matter in Microbial Ecology?

(2017) Jizhong Zhou et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Microdiversity shapes the traits, niche space, and biogeography of microbial taxa

(2017) Alyse A. Larkin et al.   Environmental Microbiology Reports

Geographic distribution at subspecies resolution level: closely related Rhodopirellula species in European coastal sediments

(2016) Marina Žure et al.   ISME Journal

Following the Antarctic Circumpolar Current: patterns and processes in the biogeography of the limpet Nacella (Mollusca: Patellogastropoda) across the Southern Ocean

(2016) Claudio A. González-Wevar et al.   JOURNAL OF BIOGEOGRAPHY

Decoupling function and taxonomy in the global ocean microbiome

(2016) S. Louca et al.   SCIENCE

Environmental conditions shape soil bacterial community structure in a fragmented landscape

(2016) Romina Almasia et al.   SOIL BIOLOGY & BIOCHEMISTRY

iNEXT: an R package for rarefaction and extrapolation of species diversity (Hill numbers)

(2016) T. C. Hsieh et al.   Methods in Ecology and Evolution

Dispersal similarly shapes both population genetics and community patterns in the marine realm

(2016) Guillem Chust et al.   Scientific Reports

Historical Contingency in Community Assembly: Integrating Niches, Species Pools, and Priority Effects

(2015) Tadashi Fukami   Annual Review of Ecology Evolution and Systematics

Error filtering, pair assembly and error correction for next-generation sequencing reads

(2015) Robert C. Edgar et al.   BIOINFORMATICS

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

(2015) Alma E. Parada et al.   ENVIRONMENTAL MICROBIOLOGY

Genetic relationships between Atlantic and Pacific populations of the notothenioid fish Eleginops maclovinus: the footprints of Quaternary glaciations in Patagonia

(2015) S G Ceballos et al.   HEREDITY

Macroecological patterns of archaeal ammonia oxidizers in the Atlantic Ocean

(2015) Eva Sintes et al.   MOLECULAR ECOLOGY

Scorched mussels (BIVALVIA: MYTILIDAE: BRACHIDONTINAE) from the temperate coasts of South America: Phylogenetic relationships, trans-Pacific connections and the footprints of Quaternary glaciations

(2015) Berenice Trovant et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Comparison of reintroduction and enhancement effects on metapopulation viability

(2015) Samniqueka J. Halsey et al.   RESTORATION ECOLOGY

Structure and function of the global ocean microbiome

(2015) S. Sunagawa et al.   SCIENCE

popart: full-feature software for haplotype network construction

(2015) Jessica W. Leigh et al.   Methods in Ecology and Evolution

Estimating and mapping ecological processes influencing microbial community assembly

(2015) James C. Stegen et al.   Frontiers in Microbiology

Open science resources for the discovery and analysis of Tara Oceans data

(2015) Stéphane Pesant et al.   Scientific Data

Microbial biogeography: the end of the ubiquitous dispersal hypothesis?

(2014) Christopher J. van der Gast   ENVIRONMENTAL MICROBIOLOGY

A guide to statistical analysis in microbial ecology: a community-focused, living review of multivariate data analyses

(2014) Pier Luigi Buttigieg et al.   FEMS MICROBIOLOGY ECOLOGY

Metacommunity organisation, spatial extent and dispersal in aquatic systems: patterns, processes and prospects

(2014) Jani Heino et al.   FRESHWATER BIOLOGY

Divergence between Antarctic and South American marine invertebrates: What molecular biology tells us about Scotia Arc geodynamics and the intensification of the Antarctic Circumpolar Current

(2014) Elie Poulin et al.   GLOBAL AND PLANETARY CHANGE

Spirochaeta psychrophila sp. nov., a psychrophilic spirochaete isolated from subseafloor sediment, and emended description of the genus Spirochaeta

(2014) M. Miyazaki et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Minimum entropy decomposition: Unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences

(2014) A Murat Eren et al.   ISME Journal

Transoceanic genetic similarities of kelp-associated sea slug populations: long-distance dispersal via rafting?

(2014) R. A. Cumming et al.   JOURNAL OF BIOGEOGRAPHY

Low level of genetic divergence between Harpagifer fish species (Perciformes: Notothenioidei) suggests a Quaternary colonization of Patagonia from the Antarctic Peninsula

(2014) Mathias Hüne et al.   POLAR BIOLOGY

PopGenReport: simplifying basic population genetic analyses in R

(2014) Aaron T. Adamack et al.   Methods in Ecology and Evolution

EXAMINING THE FULL EFFECTS OF LANDSCAPE HETEROGENEITY ON SPATIAL GENETIC VARIATION: A MULTIPLE MATRIX REGRESSION APPROACH FOR QUANTIFYING GEOGRAPHIC AND ECOLOGICAL ISOLATION

(2013) Ian J. Wang   EVOLUTION

Quantifying community assembly processes and identifying features that impose them

(2013) James C Stegen et al.   ISME Journal

Patterns and Processes of Microbial Community Assembly

(2013) D. R. Nemergut et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Drivers of population genetic differentiation in the wild: isolation by dispersal limitation, isolation by adaptation and isolation by colonization

(2013) Luisa Orsini et al.   MOLECULAR ECOLOGY

Marine bacteria exhibit a bipolar distribution

(2013) W. J. Sul et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Restricted geographic distribution and low genetic diversity of the brooding sea urchin Abatus agassizii (Spatangoidea: Schizasteridae) in the South Shetland Islands: A bridgehead population before the spread to the northern Antarctic Peninsula?

(2013) ANGIE DÍAZ et al.   REVISTA CHILENA DE HISTORIA NATURAL

Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data

(2013) A. Murat Eren et al.   Methods in Ecology and Evolution

Towards a model of postglacial biogeography in shallow marine species along the Patagonian Province: lessons from the limpet Nacella magellanica (Gmelin, 1791)

(2012) Claudio A González-Wevar et al.   BMC EVOLUTIONARY BIOLOGY

Biogeographic partitioning of Southern Ocean microorganisms revealed by metagenomics

(2012) David Wilkins et al.   ENVIRONMENTAL MICROBIOLOGY

Mechanisms determining the fate of dispersed bacterial communities in new environments

(2012) Anna J Székely et al.   ISME Journal

Stochastic and deterministic assembly processes in subsurface microbial communities

(2012) James C Stegen et al.   ISME Journal

Phycoerythrin evolution and diversification of spectral phenotype in marine Synechococcus and related picocyanobacteria

(2012) R. Craig Everroad et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

Beyond biogeographic patterns: processes shaping the microbial landscape

(2012) China A. Hanson et al.   NATURE REVIEWS MICROBIOLOGY

Population Genomics of Early Events in the Ecological Differentiation of Bacteria

(2012) B. J. Shapiro et al.   SCIENCE

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Distance decay of similarity in freshwater communities: do macro- and microorganisms follow the same rules?

(2011) Anna Astorga et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

Drivers of bacterial  -diversity depend on spatial scale

(2011) J. B. H. Martiny et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Local and regional factors influencing bacterial community assembly

(2011) Eva S. Lindström et al.   Environmental Microbiology Reports

Using null models to disentangle variation in community dissimilarity from variation in α-diversity

(2011) Jonathan M. Chase et al.   Ecosphere

pegas: an R package for population genetics with an integrated-modular approach

(2010) E. Paradis   BIOINFORMATICS

Evolutionary pathways among shallow and deep-sea echinoids of the genus Sterechinus in the Southern Ocean

(2010) A. Díaz et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

DNA BARCODING AND GENETIC DIVERGENCE IN THE GIANT KELP MACROCYSTIS (LAMINARIALES)1

(2010) Erasmo C. Macaya et al.   JOURNAL OF PHYCOLOGY

Circumpolar dispersal by rafting in two subantarctic kelp-dwelling crustaceans

(2010) R Nikula et al.   MARINE ECOLOGY PROGRESS SERIES

Long-distance island hopping without dispersal stages: transportation across major zoogeographic barriers in a Southern Ocean isopod

(2010) Florian Leese et al.   NATURWISSENSCHAFTEN

Antarctic Marine Biodiversity – What Do We Know About the Distribution of Life in the Southern Ocean?

(2010) Huw J. Griffiths   PLoS One

Bacteria dispersal by hitchhiking on zooplankton

(2010) H.-P. Grossart et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Local selection and population structure in a deep-sea fish, the roundnose grenadier (Coryphaenoides rupestris)

(2009) THOMAS A. WHITE et al.   MOLECULAR ECOLOGY

Kelp genes reveal effects of subantarctic sea ice during the Last Glacial Maximum

(2009) C. I. Fraser et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

HETEROGENEOUS GENOMIC DIFFERENTIATION BETWEEN WALKING-STICK ECOTYPES: "ISOLATION BY ADAPTATION" AND MULTIPLE ROLES FOR DIVERGENT SELECTION

(2008) Patrik Nosil et al.   EVOLUTION

Evaluating Connectivity in the Brooding Brittle Star Astrotoma agassizii across the Drake Passage in the Southern Ocean

(2008) Rebecca L. Hunter et al.   JOURNAL OF HEREDITY

Open-ocean barriers to dispersal: a test case with the Antarctic Polar Front and the ribbon wormParborlasia corrugatus(Nemertea: Lineidae)

(2008) DANIEL J. THORNHILL et al.   MOLECULAR ECOLOGY

Pleistocene separation of mitochondrial lineages of Mytilus spp. mussels from Northern and Southern Hemispheres and strong genetic differentiation among southern populations

(2008) Karin Gérard et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION