Geographic distribution at subspecies resolution level: closely related Rhodopirellula species in European coastal sediments

Geographic Distribution of Archaeal Ammonia Oxidizing Ecotypes in the Atlantic Ocean

(2016) Eva Sintes et al.   Frontiers in Microbiology

Permanent draft genome of ‘Rhodopirellula islandica’ strain K833

(2015) Jana Kizina et al.   Marine Genomics

Continental-scale distributions of dust-associated bacteria and fungi

(2015) Albert Barberán et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biogeographic patterns of bacterial microdiversity in Arctic deep-sea sediments (HAUSGARTEN, Fram Strait)

(2015) Pier Luigi Buttigieg et al.   Frontiers in Microbiology

Minimum entropy decomposition: Unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences

(2014) A Murat Eren et al.   ISME Journal

A single genus in the gut microbiome reflects host preference and specificity

(2014) A Murat Eren et al.   ISME Journal

PNAS Plus: From the Cover: Oligotyping analysis of the human oral microbiome

(2014) A. M. Eren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rhodopirellula lusitana sp. nov. and Rhodopirellula rubra sp. nov., isolated from the surface of macroalgae

(2014) Joana Bondoso et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

rpoB gene as a novel molecular marker to infer phylogeny in Planctomycetales

(2013) Joana Bondoso et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies

(2013) Anne Chao et al.   ECOLOGICAL MONOGRAPHS

Sewage reflects the distribution of human faecalLachnospiraceae

(2013) Sandra L. McLellan et al.   ENVIRONMENTAL MICROBIOLOGY

Rhodopirellula rosea sp. nov., a novel bacterium isolated from an ark clam Scapharca broughtonii

(2013) Seong Woon Roh et al.   JOURNAL OF MICROBIOLOGY

Permanent draft genomes of the two Rhodopirellula europaea strains 6C and SH398

(2013) Tim Richter-Heitmann et al.   Marine Genomics

Permanent draft genomes of the three Rhodopirellula baltica strains SH28, SWK14 and WH47

(2013) Michael Richter et al.   Marine Genomics

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Differential abundance analysis for microbial marker-gene surveys

(2013) Joseph N Paulson et al.   NATURE METHODS

Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data

(2013) A. Murat Eren et al.   Methods in Ecology and Evolution

Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding

(2012) SAMUEL D. J. BROWN et al.   Molecular Ecology Resources

The Western English Channel contains a persistent microbial seed bank

(2011) J Gregory Caporaso et al.   ISME Journal

Beyond the bacterium: planctomycetes challenge our concepts of microbial structure and function

(2011) John A. Fuerst et al.   NATURE REVIEWS MICROBIOLOGY

Planctomycetes dominate biofilms on surfaces of the kelp Laminaria hyperborea

(2010) Mia M Bengtsson et al.   BMC MICROBIOLOGY

Determination of the Diversity of Rhodopirellula Isolates from European Seas by Multilocus Sequence Analysis

(2009) N. Winkelmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Transcriptional response of the model planctomycete Rhodopirellula baltica SH1T to changing environmental conditions

(2009) Patricia Wecker et al.   BMC GENOMICS

An improved isolation method for attached-living Planctomycetes of the genus Rhodopirellula

(2009) Nadine Winkelmann et al.   JOURNAL OF MICROBIOLOGICAL METHODS

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION