Tracing colonic embryonic transcriptional profiles and their reactivation upon intestinal damage
出版年份 2021 全文链接
标题
Tracing colonic embryonic transcriptional profiles and their reactivation upon intestinal damage
作者
关键词
hindgut development, intestinal development, colon development, colitis, colon inflammatory disease, intestinal damage, Single cell RNA sequencing, DSS, single-cell atlas
出版物
Cell Reports
Volume 36, Issue 5, Pages 109484
出版商
Elsevier BV
发表日期
2021-08-04
DOI
10.1016/j.celrep.2021.109484
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Distinct Mesenchymal Cell Populations Generate the Essential Intestinal BMP Signaling Gradient
- (2020) Neil McCarthy et al. Cell Stem Cell
- High-Resolution mRNA and Secretome Atlas of Human Enteroendocrine Cells
- (2020) Joep Beumer et al. CELL
- Cdk1 Controls Global Epigenetic Landscape in Embryonic Stem Cells
- (2020) Wojciech Michowski et al. MOLECULAR CELL
- Benchmarking single-cell RNA-sequencing protocols for cell atlas projects
- (2020) Elisabetta Mereu et al. NATURE BIOTECHNOLOGY
- Lineage reversion drives WNT independence in intestinal cancer
- (2020) Teng Han et al. Cancer Discovery
- Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease
- (2020) Rasa Elmentaite et al. DEVELOPMENTAL CELL
- Distinct populations of crypt-associated fibroblasts act as signaling hubs to control colon homeostasis
- (2020) Michael David Brügger et al. PLOS BIOLOGY
- Colonic epithelial cell diversity in health and inflammatory bowel disease
- (2019) Kaushal Parikh et al. NATURE
- Identification of Enteroendocrine Regulators by Real-Time Single-Cell Differentiation Mapping
- (2019) Helmuth Gehart et al. CELL
- Yin Yang 1 Orchestrates a Metabolic Program Required for Both Neural Crest Development and Melanoma Formation
- (2019) Sandra Varum et al. Cell Stem Cell
- Tracing the origin of adult intestinal stem cells
- (2019) Jordi Guiu et al. NATURE
- The emergent landscape of the mouse gut endoderm at single-cell resolution
- (2019) Sonja Nowotschin et al. NATURE
- Comprehensive Integration of Single-Cell Data
- (2019) Tim Stuart et al. CELL
- Emerging diverse roles of telocytes
- (2019) Ayano Kondo et al. DEVELOPMENT
- Roles of Myosin-Mediated Membrane Trafficking in TGF-β Signaling
- (2019) Chih-Ling Chung et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- SOX11 and SOX4 drive the reactivation of an embryonic gene program during murine wound repair
- (2019) Qi Miao et al. Nature Communications
- R-spondin 3 promotes stem cell recovery and epithelial regeneration in the colon
- (2019) Christine Harnack et al. Nature Communications
- A gene regulatory network to control EMT programs in development and disease
- (2019) Hassan Fazilaty et al. Nature Communications
- Midkine (MDK) growth factor: a key player in cancer progression and a promising therapeutic target
- (2019) Panagiota S. Filippou et al. ONCOGENE
- Integrating single-cell transcriptomic data across different conditions, technologies, and species
- (2018) Andrew Butler et al. NATURE BIOTECHNOLOGY
- PDGFRα+pericryptal stromal cells are the critical source of Wnts and RSPO3 for murine intestinal stem cells in vivo
- (2018) Gediminas Greicius et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structural Remodeling of the Human Colonic Mesenchyme in Inflammatory Bowel Disease
- (2018) James Kinchen et al. CELL
- Parasitic helminths induce fetal-like reversion in the intestinal stem cell niche
- (2018) Ysbrand M. Nusse et al. NATURE
- OUP accepted manuscript
- (2018) NUCLEIC ACIDS RESEARCH
- Sox4 Promotes Atoh1-Independent Intestinal Secretory Differentiation Toward Tuft and Enteroendocrine Fates
- (2018) Adam D. Gracz et al. GASTROENTEROLOGY
- Tales from the crypt: new insights into intestinal stem cells
- (2018) Helmuth Gehart et al. Nature Reviews Gastroenterology & Hepatology
- A single-cell survey of the small intestinal epithelium
- (2017) Adam L. Haber et al. NATURE
- CD34+mesenchymal cells are a major component of the intestinal stem cells niche at homeostasis and after injury
- (2017) Igor Stzepourginski et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- EMT: 2016
- (2016) M. Angela Nieto et al. CELL
- De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data
- (2016) Dominic Grün et al. Cell Stem Cell
- Transcriptome of the inner circular smooth muscle of the developing mouse intestine: Evidence for regulation of visceral smooth muscle genes by the hedgehog target gene,cJun
- (2016) Katherine Gurdziel et al. DEVELOPMENTAL DYNAMICS
- Ascl1 Is Required for the Development of Specific Neuronal Subtypes in the Enteric Nervous System
- (2016) F. Memic et al. JOURNAL OF NEUROSCIENCE
- Generation of an inducible colon-specific Cre enzyme mouse line for colon cancer research
- (2016) Paul W. Tetteh et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Reg4+deep crypt secretory cells function as epithelial niche for Lgr5+stem cells in colon
- (2016) Nobuo Sasaki et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Aurkb/PP1-mediated resetting of Oct4 during the cell cycle determines the identity of embryonic stem cells
- (2016) Jihoon Shin et al. eLife
- The ubiquitin hybrid gene UBA52 regulates ubiquitination of ribosome and sustains embryonic development
- (2016) Masanori Kobayashi et al. Scientific Reports
- The intestinal immunoendocrine axis: novel cross-talk between enteroendocrine cells and the immune system during infection and inflammatory disease: Figure 1
- (2015) John J Worthington BIOCHEMICAL SOCIETY TRANSACTIONS
- SOX9 Maintains Reserve Stem Cells and Preserves Radioresistance in Mouse Small Intestine
- (2015) Kyle C. Roche et al. GASTROENTEROLOGY
- Transcriptome-wide Analysis Reveals Hallmarks of Human Intestine Development and Maturation In Vitro and In Vivo
- (2015) Stacy R. Finkbeiner et al. Stem Cell Reports
- The Cytoskeletal Protein RHAMM and ERK1/2 Activity Maintain the Pluripotency of Murine Embryonic Stem Cells
- (2013) Jihong Jiang et al. PLoS One
- Identification of Lgr5-Independent Spheroid-Generating Progenitors of the Mouse Fetal Intestinal Epithelium
- (2013) Roxana C. Mustata et al. Cell Reports
- Stacking the DEK: From chromatin topology to cancer stem cells
- (2012) Lisa M. Privette Vinnedge et al. CELL CYCLE
- Fiji: an open-source platform for biological-image analysis
- (2012) Johannes Schindelin et al. NATURE METHODS
- Inflammation and colorectal cancer: colitis-associated neoplasia
- (2012) Sergei I. Grivennikov Seminars in Immunopathology
- Vertebrate intestinal endoderm development
- (2011) Jason R. Spence et al. DEVELOPMENTAL DYNAMICS
- Gastric tuft cells express DCLK1 and are expanded in hyperplasia
- (2011) Milena Saqui-Salces et al. HISTOCHEMISTRY AND CELL BIOLOGY
- Interactions between cancer stem cells and their niche govern metastatic colonization
- (2011) Ilaria Malanchi et al. NATURE
- Human Mitochondrial Leucyl-tRNA Synthetase Corrects Mitochondrial Dysfunctions Due to the tRNALeu(UUR) A3243G Mutation, Associated with Mitochondrial Encephalomyopathy, Lactic Acidosis, and Stroke-Like Symptoms and Diabetes
- (2010) R. Li et al. MOLECULAR AND CELLULAR BIOLOGY
- Directed differentiation of human pluripotent stem cells into intestinal tissue in vitro
- (2010) Jason R. Spence et al. NATURE
- Distinct SOX9 levels differentially mark stem/progenitor populations and enteroendocrine cells of the small intestine epithelium
- (2009) Eric J. Formeister et al. AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY
- ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks
- (2009) Gabriela Bindea et al. BIOINFORMATICS
- Enolase-1 promotes plasminogen-mediated recruitment of monocytes to the acutely inflamed lung
- (2009) M. Wygrecka et al. BLOOD
- OLFM4 Is a Robust Marker for Stem Cells in Human Intestine and Marks a Subset of Colorectal Cancer Cells
- (2009) Laurens G. van der Flier et al. GASTROENTEROLOGY
- Decorin modulates collagen matrix assembly and mineralization
- (2008) Yoshiyuki Mochida et al. MATRIX BIOLOGY
- The ADAM metalloproteinases
- (2008) D EDWARDS et al. MOLECULAR ASPECTS OF MEDICINE
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation