AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence
出版年份 2021 全文链接
标题
AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence
作者
关键词
-
出版物
Scientific Reports
Volume 11, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2021-06-16
DOI
10.1038/s41598-021-91456-0
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Emergence of mcr-9.1 in Extended-Spectrum-β-Lactamase-Producing Clinical Enterobacteriaceae in Pretoria, South Africa: Global Evolutionary Phylogenomics, Resistome, and Mobilome
- (2020) John Osei Sekyere et al. mSystems
- ResFinder 4.0 for predictions of phenotypes from genotypes
- (2020) Valeria Bortolaia et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- ICEs Are the Main Reservoirs of the Ciprofloxacin-Modifying crpP Gene in Pseudomonas aeruginosa
- (2020) João Botelho et al. Genes
- Comparative Genomic Analysis of 450 Strains of Salmonella enterica Isolated from Diseased Animals
- (2020) Shaohua Zhao et al. Genes
- Virulence gene profiles and phylogeny of Shiga toxin-positive Escherichia coli strains isolated from FDA regulated foods during 2010-2017
- (2019) Narjol González-Escalona et al. PLoS One
- Validating the NCBI AMRFinder Tool and Resistance Gene Database Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of NARMS Isolates
- (2019) Michael Feldgarden et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Using Genomics to Track Global Antimicrobial Resistance
- (2019) Rene S. Hendriksen et al. Frontiers in Public Health
- Emergence of new variants of antibiotic resistance genomic islands among multidrug‐resistant Salmonella enterica in poultry
- (2019) Emiliano Cohen et al. ENVIRONMENTAL MICROBIOLOGY
- MEGARes 2.0: a database for classification of antimicrobial drug, biocide and metal resistance determinants in metagenomic sequence data
- (2019) Enrique Doster et al. NUCLEIC ACIDS RESEARCH
- Mercury bioremediation by mercury resistance transposon-mediated in situ molecular breeding
- (2018) Kazuaki Matsui et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Genomics of foodborne pathogens for microbial food safety
- (2018) Marc W Allard et al. CURRENT OPINION IN BIOTECHNOLOGY
- Comparison of phenotypic and WGS-derived antimicrobial resistance profiles of Salmonella enterica serovars Typhi and Paratyphi
- (2017) Martin R Day et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Comparison of phenotypic and WGS-derived antimicrobial resistance profiles of enteroaggregative Escherichia coli isolated from cases of diarrhoeal disease in England, 2015–16
- (2017) Vivienne Do Nascimento et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- RefSeq: an update on prokaryotic genome annotation and curation
- (2017) Daniel H Haft et al. NUCLEIC ACIDS RESEARCH
- Comparative Sequence Analysis of Multidrug-Resistant IncA/C Plasmids from Salmonella enterica
- (2017) Maria Hoffmann et al. Frontiers in Microbiology
- Implementation of Nationwide Real-time Whole-genome Sequencing to Enhance Listeriosis Outbreak Detection and Investigation
- (2016) Brendan R. Jackson et al. CLINICAL INFECTIOUS DISEASES
- Real-Time Genome Sequencing of Resistant Bacteria Provides Precision Infection Control in an Institutional Setting
- (2016) Alexander Mellmann et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Whole-Genome Sequencing Analysis Accurately Predicts Antimicrobial Resistance Phenotypes in Campylobacter spp.
- (2015) S. Zhao et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Using comparative genomics to drive new discoveries in microbiology
- (2015) Daniel H Haft CURRENT OPINION IN MICROBIOLOGY
- Database resources of the National Center for Biotechnology Information
- (2015) NUCLEIC ACIDS RESEARCH
- The Comprehensive Antibiotic Resistance Database
- (2013) Andrew G. McArthur et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- BacMet: antibacterial biocide and metal resistance genes database
- (2013) Chandan Pal et al. NUCLEIC ACIDS RESEARCH
- The limitations of draft assemblies for understanding prokaryotic adaptation and evolution
- (2012) N. Ricker et al. GENOMICS
- Identification of acquired antimicrobial resistance genes
- (2012) E. Zankari et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Multicenter Evaluation of a Sequence-Based Protocol for Subtyping Shiga Toxins and Standardizing Stx Nomenclature
- (2012) F. Scheutz et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Accelerated Profile HMM Searches
- (2011) Sean R. Eddy PLoS Computational Biology
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
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