Article
Infectious Diseases
Satheesh Nair, Marie Chattaway, Gemma C. Langridge, Amy Gentle, Martin Day, Emma Ainsworth, Iman Mohamed, Robert Smith, Claire Jenkins, Timothy J. Dallman, Gauri Godbole
Summary: The study found that ESBL-producing strains, notably XDR Salmonella Typhi from Sindh, Pakistan, were responsible for a significant number of enteric fever cases imported into England and Wales. This highlights the challenge of clinical management in the face of emerging antibiotic resistance, necessitating the inclusion of carbapenems in the empirical treatment of complicated enteric fever cases returning from Pakistan.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
(2021)
Article
Microbiology
Diana Albertos Torres, Helena M. B. Seth-Smith, Nicole Joosse, Claudia Lang, Olivier Dubuis, Magdalena Nuesch-Inderbinen, Vladimira Hinic, Adrian Egli
Summary: Colistin is used to combat multi-drug resistant pathogens, with resistance emerging either through plasmid-mediated genes or chromosomal mutations. This study compared the performance of five phenotypic approaches in detecting colistin resistance mechanisms. The Rapid Polymyxin (TM) NP test showed highest categorical concordance, while UMIC provided MIC values that closely matched with the standard BMD method. Colistin resistance was found to occur predominantly through chromosomal mutations rather than plasmid-mediated mechanisms across diverse species.
Article
Pharmacology & Pharmacy
Vemula Prasastha Ram, Jyothsna Yasur, Padikkamannil Abishad, Varsha Unni, Diksha Purushottam Gourkhede, Maria Anto Dani Nishanth, Pollumahanti Niveditha, Jess Vergis, Satya Veer Singh Malik, Byrappa Kullaiah, Nitin Vasantrao Kurkure, Chatragadda Ramesh, Laurent Dufosse, Deepak B. Rawool, Sukhadeo B. Barbuddhe
Summary: This study investigated the antimicrobial efficacy of nanosilver-entrapped cinnamaldehyde (AgC) against multi-drug-resistant strains of enteroaggregative Escherichia coli (EAEC). The results showed that AgC had a high stability, safety, and effectiveness in inhibiting and killing MDR-EAEC. In vivo experiments using Galleria mellonella larvae also confirmed the antibacterial and immunomodulatory effects of AgC.
Article
Infectious Diseases
Alyssa R. Golden, James A. Karlowsky, Andrew Walkty, Melanie R. Baxter, Andrew J. Denisuik, Melissa McCracken, Michael R. Mulvey, Heather J. Adam, Denice Bay, George G. Zhanel
Summary: The study demonstrated that genotypic resistance profile inferred from WGS can accurately predict phenotypic resistance for ESBL-producing E. coli, with the highest predictive accuracy observed for ciprofloxacin. However, major error and/or very major error rates were >= 3% for some antibiotics.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
(2021)
Article
Biotechnology & Applied Microbiology
Debjani Ghosh, Goutam Chowdhury, Prosenjit Samanta, Sreeja Shaw, Alok K. Deb, Mainak Bardhan, Asis Manna, Shin-Ichi Miyoshi, Thandavarayan Ramamurthy, Shanta Dutta, Asish K. Mukhopadhyay
Summary: This study examines the prevalence and antimicrobial resistance of major diarrhoeagenic Escherichia coli (DEC) pathogens in hospitalized diarrhoeal patients in Kolkata, India. The findings reveal a high prevalence of multidrug resistance (MDR) among DEC, which poses a significant public health threat. The study emphasizes the importance of monitoring antimicrobial resistance due to the high resistance of DEC isolates to commonly used antimicrobials in diarrhoea treatment.
JOURNAL OF APPLIED MICROBIOLOGY
(2022)
Article
Microbiology
Chao Yang, Yinghui Li, Le Zuo, Min Jiang, Xianglilan Zhang, Li Xie, Miaomiao Luo, Yiying She, Lei Wang, Yixiang Jiang, Shuang Wu, Rui Cai, Xiaolu Shi, Yujun Cui, Chengsong Wan, Qinghua Hu
Summary: This study provides novel insights into the genomic epidemiology and antimicrobial susceptibility profile of ETEC infections in indigenous adults for the first time, improving understanding on ETEC epidemiology and implications for vaccine development and future surveillance and prevention of ETEC infections.
FRONTIERS IN MICROBIOLOGY
(2021)
Article
Microbiology
Maryam Dadar, Saeed Alamian, Hanka Brangsch, Mohamed Elbadawy, Ahmed R. Elkharsawi, Heinrich Neubauer, Gamal Wareth
Summary: This study investigated antimicrobial resistance (AMR) and virulence-associated factors in Brucella isolates from humans and animals in Iran. B. melitensis was the most common species, while B. abortus was isolated from only one human case. The isolates showed intermediate or resistant phenotype patterns for certain antibiotics. Whole genome sequencing (WGS) identified several virulence-associated genes, but failed to determine classical AMR genes. The findings suggest a need for further investigation into the proteomic and transcriptomic levels of phenotypic resistance mechanisms.
Article
Microbiology
Ana Rita Rebelo, Valeria Bortolaia, Pimlapas Leekitcharoenphon, Dennis Schroder Hansen, Hans Linde Nielsen, Svend Ellermann-Eriksen, Michael Kemp, Bent Lowe Roder, Niels Frimodt-Moller, Turid Snekloth Sondergaard, John Eugenio Coia, Claus ostergaard, Henrik Westh, Frank M. Aarestrup
Summary: This study compared the applicability of standard phenotypic AST results with WGS-based predictions of AMR profiles in clinical settings. The results showed that WGS has the potential to be used in clinical microbiology, but there were inconsistencies in certain species and antimicrobial agent combinations.
FRONTIERS IN MICROBIOLOGY
(2022)
Article
Biotechnology & Applied Microbiology
Padikkamannil Abishad, Jess Vergis, Varsha Unni, Vemula Prasastha Ram, Pollumahanti Niveditha, Jyothsana Yasur, Sanis Juliet, Lijo John, Kullaiya Byrappa, Prejit Nambiar, Nitin Vasantrao Kurkure, Sukhadeo Baliram Barbuddhe, Deepak Bhiwa Rawool
Summary: This study successfully synthesized green silver nanoparticles using probiotic strain Lactobacillus acidophilus, which demonstrated antibacterial and antibiofilm activity against multi-drug-resistant enteroaggregative Escherichia coli (MDR-EAEC) strains. Additionally, the green synthesized AgNPs showed antioxidant properties.
PROBIOTICS AND ANTIMICROBIAL PROTEINS
(2022)
Article
Infectious Diseases
Caroline Gastaldi Guerrieri, Mariana Teixeira Goncalves, Anazi Ferreira da Silva, Andre Luis Souza dos Santos, Kenia Valeria dos Santos, Liliana Cruz Spano
Summary: This study investigated the biofilm formation capacity of clinical strains of Enteroaggregative Escherichia coli (EAEC) and their susceptibility to various antimicrobial agents. It was found that some strains developed resistance to certain antimicrobials, while remaining susceptible to others. Additionally, the combination of certain antimicrobials was effective in eradicating the biofilms of some strains, suggesting their potential usefulness in the treatment of EAEC-related diarrhea.
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE
(2023)
Article
Microbiology
Maitane Tello, Medelin Ocejo, Beatriz Oporto, Jose Luis Lavin, Ana Hurtado
Summary: A longitudinal study was conducted in five dairy cattle farms to assess the within-farm dynamics of ESBL-/AmpC-/carbapenemase-producing E. coli and their resistance profiles. The study found that the isolation frequency and resistance profiles of cefotaxime-resistant E. coli varied among farms and age groups. The genetic analysis of isolates from two farms suggested the occurrence of horizontal transfer of plasmids carrying antibiotic resistance genes. This highlights the importance of surveillance for monitoring the spread of antibiotic resistance in agricultural settings.
FRONTIERS IN MICROBIOLOGY
(2022)
Review
Microbiology
J. Urbaniec, Ye Xu, Y. Hu, S. Hingley-Wilson, J. McFadden
Summary: This review discusses antibiotic persistence, presents the "hunker" theory of persister cell formation based on intrinsic heterogeneity of bacterial growth and metabolism, and emphasizes the urgent need to develop effective anti-persister treatment regimes to combat antimicrobial resistance.
FEMS MICROBIOLOGY REVIEWS
(2022)
Article
Veterinary Sciences
Nicolas Galarce, Gabriel Arriagada, Fernando Sanchez, Beatriz Escobar, Mauricio Miranda, Sofia Matus, Rocio Vilches, Camila Varela, Carlos Zelaya, Josefa Peralta, Esteban Paredes-Osses, Gerardo Gonzalez-Rocha, Lisette Lapierre
Summary: This study aimed to characterize the antimicrobial resistance of Escherichia coli strains isolated from healthy household dogs in Chile. The results showed that the isolated E. coli strains exhibited resistance to multiple drugs and carried antimicrobial resistance genes considered critical for human health. These findings can be used as a basis for future surveillance programs and control measures against antimicrobial resistance.
FRONTIERS IN VETERINARY SCIENCE
(2023)
Article
Microbiology
Ying Zhu, Xinmiao Jia, Peiyao Jia, Xue Li, Qiwen Yang
Summary: NDM-29, a novel carbapenemase that can hydrolyze almost all clinically available beta-lactam antibiotics, was discovered in an Escherichia coli in China. The presence of NDM-29 may pose a threat to antimicrobial resistance control and highlights the importance of monitoring bacterial mutations.
FRONTIERS IN MICROBIOLOGY
(2021)
Article
Infectious Diseases
Jing Yang, Hong-tao Ren, Jie Wang, Ai-ying Dong, Yu-lan Chen, Di-xia Hu, Hao Wang, Hong-meng Ji, Hai-nan Wen, Ying Chen, Dong-yan Shi
Summary: This study retrospectively analyzed the microbiological characteristics, antimicrobial resistance profiles, antibiotic choice, and outcomes of Nocardia infection in various centers over a 7-year period. The most common species identified were Nocardia cyriacigeorgica and Nocardia farcinica. TMP-SMX was found to be the treatment of choice for nocardiosis, with a high clinical improvement rate.
INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES
(2023)
Article
Infectious Diseases
Simon Packers, Bruno Pichon, Stephen Thompson, Jane Neale, Jacquelyn Njoroge, Rachel M. Kwiatkowska, Isabel Oliver, Maggie Telfer, Michel Doumith, Camillus Buunaaisie, Ellen Heinsbroek, Noreen Hopewell-Kelly, Monica Desai, Vivian Hope, Owen Martin Williams, Angela Kearns, Mathew Hickman, Maya Gobin
Letter
Infectious Diseases
Tomas-Paul Cusack, Vilayouth Phimolsarnnousith, Khuanta Duangmala, Phonelavanh Phoumin, Jane Turton, Katie L. Hopkins, Neil Woodford, Nandini Shetty, Nicole Stoesser, Hang T. T. Phan, David A. B. Dance
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
(2019)
Article
Infectious Diseases
Anais Painset, Martin Day, Michel Doumith, Jonathan Rigby, Claire Jenkins, Kathie Grant, Timothy J. Dallman, Gauri Godbole, Craig Swift
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
(2020)
Article
Public, Environmental & Occupational Health
Majed F. Alghoribi, Khalifa Binkhamis, Abdulrahman A. Alswaji, Ali Alhijji, Aynaa Alsharidi, Hanan H. Balkhy, Michel Doumith, Ali Somily
JOURNAL OF INFECTION AND PUBLIC HEALTH
(2020)
Article
Genetics & Heredity
Cheryll M. Sia, David R. Greig, Martin Day, Hassan Hartman, Anais Painset, Michel Doumith, Daniele Meunier, Claire Jenkins, Marie Anne Chattaway, Katie L. Hopkins, Neil Woodford, Gauri Godbole, Timothy J. Dallman
MICROBIAL GENOMICS
(2020)
Letter
Infectious Diseases
Majed F. Alghoribi, Taseen S. Desin, Abdulrahman A. Alswaji, Bassam H. Al Alwan, Maha Alzayer, Liliane Okdah, Sameera Al Johani, Hanan H. Balkhy, Michel Doumith
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
(2020)
Article
Infectious Diseases
Shazad Mushtaq, Anna Vickers, Michel Doumith, Matthew J. Ellington, Neil Woodford, David M. Livermore
Summary: Taniborbactam potentiates partner beta-Lactams against various Enterobacterales with different carbapenemases, showing potential broader spectrum compared to vaborbactam.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
(2021)
Article
Multidisciplinary Sciences
Majed F. Alghoribi, Moayad Alqurashi, Liliane Okdah, Bassam Alalwan, Yahya S. AlHebaishi, Abdulmajeed Almalki, Maha A. Alzayer, Abdulrahman A. Alswaji, Michel Doumith, Mazin Barry
Summary: The challenging Pandrug-resistant K. pneumoniae infection can be successfully overcome and cleared rapidly through testing different drug combinations.
SCIENTIFIC REPORTS
(2021)
Article
Microbiology
Michel Doumith, Sarah Alhassinah, Abdulrahman Alswaji, Maha Alzayer, Essa Alrashidi, Liliane Okdah, Sameera Aljohani, Hanan H. Balkhy, Majed F. Alghoribi
Summary: Carbapenem-resistant P. aeruginosa is a major clinical problem in Saudi Arabia. This study provides insights into the genetic characteristics and antibiotic resistance mechanisms of these clinical isolates, highlighting the global spread of specific sub-lineages. It emphasizes the importance of routine detection of rare beta-lactamases.
FRONTIERS IN MICROBIOLOGY
(2022)
Article
Medicine, Research & Experimental
Maha Alamri, Heba Alghamdi, Sahar Althawadi, Maysoon Mutabaggani, M. Anas Dababo, Fahad Alajlan, Maha Alzayer, Michel Doumith, Majed Alghoribi, Reem S. Almaghrabi
Summary: Neoscytalidium is a plant pathogen commonly found in plants and soil, causing skin and nail infections as well as invasive diseases in immunocompromised patients. Despite combined surgical and medical therapies, treating invasive fungal diseases caused by Neoscytalidium can be challenging and often result in fatal outcomes.
MEDICAL MYCOLOGY CASE REPORTS
(2021)
Article
Microbiology
Katie L. Hopkins, Nicholas Ellaby, Matthew J. Ellington, Michel Doumith, Nazim Mustafa, Daniele Meunier, Neil Woodford
Summary: By sequencing CPE samples from the national reference laboratory in England, we found that the epidemiology of CPE in England is diverse, indicating multiple introductions and a role for horizontal transfer of carbapenemase genes.
JOURNAL OF MEDICAL MICROBIOLOGY
(2022)
Article
Infectious Diseases
Maha Alzayer, Majed F. Alghoribi, Bassam Alalwan, Abdualah Alreheli, Sameera Aljohani, Mohammad Bosaeed, Michel Doumith
Summary: This study investigated the in vitro activity of Cefiderocol against carbapenem non-susceptible Gram-negative bacteria collected in Saudi Arabia. The results showed that Cefiderocol exhibited excellent activity, especially against multidrug-resistant non-fermenting Gram-negative pathogens.
JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE
(2023)
Article
Infectious Diseases
Maha Alzayer, Manal M. Alkhulaifi, Ahmed Alyami, Mohammed Aldosary, Abdulaziz Alageel, Ghada Garaween, Atef Shibl, Arif M. Al-Hamad, Michel Doumith
Summary: Group B Streptococcus (GBS) has emerged as an important cause of severe infections in adults. This study investigated the epidemiology of GBS in Saudi Arabia and found that serotypes III and V were the most prevalent, and most isolates harbored pilus island 1 and 2a types. The isolates exhibited high levels of resistance to erythromycin and clindamycin, which require further surveillance.
JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE
(2023)
Article
Infectious Diseases
Antoine Abou Fayad, Maria El Azzi, Ahmad Sleiman, Issmat I. Kassem, Reema A. Bawazeer, Liliane Okdah, Michel Doumith, Majed F. Alghoribi, Ghassan M. Matar
Summary: The study revealed the presence of mcr and other important resistance determinants in MDR E. coli isolated from poultry farms in Lebanon, with resistance genes predominantly located on IncX4 plasmids. Some strains may pose a risk of transmission to humans.
JAC-ANTIMICROBIAL RESISTANCE
(2021)
Article
Infectious Diseases
David M. Livermore, Michaela Day, Paul Cleary, Katie L. Hopkins, Mark A. Toleman, David W. Wareham, Camilla Wiuff, Michel Doumith, Neil Woodford
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
(2019)