Occurrence and distribution of microbial pollutants in coastal areas of the Adriatic Sea influenced by river discharge

Sources and Metal Pollution of Sediments from a Coastal Area of the Central Western Adriatic Sea (Southern Marche Region, Italy)

(2021) Federico Spagnoli et al.   Applied Sciences-Basel

Geochemical and Geophysical Monitoring of Hydrocarbon Seepage in the Adriatic Sea

(2020) Marzia Rovere et al.   SENSORS

FORENSIC: an Online Platform for Fecal Source Identification

(2020) Adélaïde Roguet et al.   mSystems

Major Role of Surrounding Environment in Shaping Biofilm Community Composition on Marine Plastic Debris

(2020) Marco Basili et al.   Frontiers in Marine Science

Temporal Changes in Microbial Communities Beneath Fish Farm Sediments Are Related to Organic Enrichment and Fish Biomass Over a Production Cycle

(2020) Grazia Marina Quero et al.   Frontiers in Marine Science

Exploring changes in bacterial communities to assess the influence of fish farming on marine sediments

(2019) Esther Rubio-Portillo et al.   AQUACULTURE

Potential pathogen communities in highly polluted river ecosystems: Geographical distribution and environmental influence

(2019) Yuzhan Yang et al.   AMBIO

Biostimulation of in situ microbial degradation processes in organically-enriched sediments mitigates the impact of aquaculture

(2019) Francesca Ape et al.   CHEMOSPHERE

Enterococci may not present the pollution of most enteric pathogenic bacteria in recreational seawaters of Xinghai bathing Beach, China

(2019) Hongxia Ming et al.   ECOLOGICAL INDICATORS

Highly heterogeneous temporal dynamics in the abundance and diversity of the emerging pathogens Arcobacter at an urban beach

(2019) Richard L. Carney et al.   WATER RESEARCH

Status of faecal pollution in ports: A basin-wide investigation in the Adriatic Sea

(2018) Gian Marco Luna et al.   MARINE POLLUTION BULLETIN

Meiofaunal communities in four Adriatic ports: Baseline data for risk assessment in ballast water management

(2018) Elisa Baldrighi et al.   MARINE POLLUTION BULLETIN

Population density controls on microbial pollution across the Ganga catchment

(2018) D.G. Milledge et al.   WATER RESEARCH

Distribution patterns of organic pollutants and microbial processes in marine sediments across a gradient of anthropogenic impact

(2018) A. Zoppini et al.   ENVIRONMENTAL POLLUTION

Polycyclic aromatic hydrocarbon (PAH) accumulation in different common sole (Solea solea) tissues from the North Adriatic Sea peculiar impacted area

(2018) Emanuela Frapiccini et al.   MARINE POLLUTION BULLETIN

Alterations of gene expression indicating effects on estrogen signaling and lipid homeostasis in seabream hepatocytes exposed to extracts of seawater sampled from a coastal area of the central Adriatic Sea (Italy)

(2017) Paolo Cocci et al.   MARINE ENVIRONMENTAL RESEARCH

Spatial and temporal microbial pollution patterns in a tropical estuary during high and low river flow conditions

(2017) T.N. Wiegner et al.   MARINE POLLUTION BULLETIN

Distribution and fate of legacy and emerging contaminants along the Adriatic Sea: A comparative study

(2016) Tatiane Combi et al.   ENVIRONMENTAL POLLUTION

Determination of estrogenic activity in the river Chienti (Marche Region, Italy) by using in vivo and in vitro bioassays

(2016) Paolo Cocci et al.   JOURNAL OF ENVIRONMENTAL SCIENCES

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Decoupling function and taxonomy in the global ocean microbiome

(2016) S. Louca et al.   SCIENCE

dendextend: an R package for visualizing, adjusting and comparing trees of hierarchical clustering

(2015) Tal Galili   BIOINFORMATICS

Pb, Cu and Cd distribution in five estuary systems of Marche, central Italy

(2015) Anna Annibaldi et al.   MARINE POLLUTION BULLETIN

Bacterial diversity of polluted surface sediments in the northern Adriatic Sea

(2015) Marino Korlević et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Distribution of Escherichia coli in a coastal lagoon (Venice, Italy): Temporal patterns, genetic diversity and the role of tidal forcing

(2015) L. Perini et al.   WATER RESEARCH

Potential applications of next generation DNA sequencing of 16S rRNA gene amplicons in microbial water quality monitoring

(2015) J. Vierheilig et al.   WATER SCIENCE AND TECHNOLOGY

Sewage Reflects the Microbiomes of Human Populations

(2015) Ryan J. Newton et al.   mBio

Patterns of benthic bacterial diversity in coastal areas contaminated by heavy metals, polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs)

(2015) Grazia Marina Quero et al.   Frontiers in Microbiology

The effects of precipitation, river discharge, land use and coastal circulation on water quality in coastal Maine

(2015) Charles E. Tilburg et al.   Royal Society Open Science

Alternative Fecal Indicators and Their Empirical Relationships with Enteric Viruses, Salmonella enterica, and Pseudomonas aeruginosa in Surface Waters of a Tropical Urban Catchment

(2014) L. Liang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A thermogenic hydrocarbon seep in shallow Adriatic Sea (Italy): Gas origin, sediment contamination and benthic foraminifera

(2014) G. Etiope et al.   MARINE AND PETROLEUM GEOLOGY

Discovering new indicators of fecal pollution

(2014) Sandra L. McLellan et al.   TRENDS IN MICROBIOLOGY

Population dynamics and ecology of Arcobacter in sewage

(2014) Jenny C. Fisher et al.   Frontiers in Microbiology

Sewage reflects the distribution of human faecalLachnospiraceae

(2013) Sandra L. McLellan et al.   ENVIRONMENTAL MICROBIOLOGY

Core sediment bacteria drive community response to anthropogenic contamination over multiple environmental gradients

(2013) Melanie Y. Sun et al.   ENVIRONMENTAL MICROBIOLOGY

Spatial and temporal dynamics of bacterial contamination in South France coastal rivers: focus on in-stream processes during low flows and floods

(2013) Y. Chu et al.   HYDROLOGICAL PROCESSES

A Microbial Signature Approach to Identify Fecal Pollution in the Waters Off an Urbanized Coast of Lake Michigan

(2013) Ryan J. Newton et al.   MICROBIAL ECOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

The role of planktonicFlavobacteriain processing algal organic matter in coastal East Antarctica revealed using metagenomics and metaproteomics

(2012) Timothy J. Williams et al.   ENVIRONMENTAL MICROBIOLOGY

Enterococci in the Environment

(2012) Muruleedhara N. Byappanahalli et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Lachnospiraceae and Bacteroidales Alternative Fecal Indicators Reveal Chronic Human Sewage Contamination in an Urban Harbor

(2011) Ryan J. Newton et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R

(2011) Hanbo Chen et al.   BMC BIOINFORMATICS

Persistence of heavy metals in river sediments

(2011) Maria Letizia Ruello et al.   CHEMISTRY AND ECOLOGY

River water and nutrient discharges in the Northern Adriatic Sea: Current importance and long term changes

(2011) Stefano Cozzi et al.   CONTINENTAL SHELF RESEARCH

The influence of an exceptional Po River flood on the physical and chemical oceanographic properties of the Adriatic Sea

(2011) Alessandra Campanelli et al.   DYNAMICS OF ATMOSPHERES AND OCEANS

Interlaboratory Comparison of Real-Time PCR Protocols for Quantification of General Fecal Indicator Bacteria

(2011) Orin C. Shanks et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species

(2011) C. Luo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Associations among pathogenic bacteria, parasites, and environmental and land use factors in multiple mixed-use watersheds

(2011) G. Wilkes et al.   WATER RESEARCH

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Oxidation of aliphatic, branched chain, and aromatic hydrocarbons by Nocardia cyriacigeorgica isolated from oil-polluted sand samples collected in the Saudi Arabian Desert

(2010) Le Thi Nhi-Cong et al.   JOURNAL OF BASIC MICROBIOLOGY

Absorption spectral slopes and slope ratios as indicators of molecular weight, source, and photobleaching of chromophoric dissolved organic matter

(2010) John R. Helms et al.   LIMNOLOGY AND OCEANOGRAPHY

Winter to spring variations of chromophoric dissolved organic matter in a temperate estuary (Po River, northern Adriatic Sea)

(2010) D. Berto et al.   MARINE ENVIRONMENTAL RESEARCH

Cultivation of Uncultured Chloroflexi Subphyla: Significance and Ecophysiology of Formerly Uncultured Chloroflexi 'Subphylum I' with Natural and Biotechnological Relevance

(2009) Takeshi Yamada et al.   MICROBES AND ENVIRONMENTS

Comparison of Fecal Indicator Bacteria Densities in Marine Recreational Waters by QPCR

(2009) Eunice C. Chern et al.   Water Quality Exposure and Health

Assessment of Water Pollution in the Tronto River (Italy) by Applying Useful Biomarkers in the Fish Model Carassius auratus

(2008) F. A. Palermo et al.   ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY

Structure of bacterial communities along a hydrocarbon contamination gradient in a coastal sediment

(2008) Sandrine Paissé et al.   FEMS MICROBIOLOGY ECOLOGY