Core sediment bacteria drive community response to anthropogenic contamination over multiple environmental gradients

The challenge of choosing environmental indicators of anthropogenic impacts in estuaries

(2012) Katherine A. Dafforn et al.   ENVIRONMENTAL POLLUTION

A decade of seasonal dynamics and co-occurrences within freshwater bacterioplankton communities from eutrophic Lake Mendota, WI, USA

(2012) Emily L Kara et al.   ISME Journal

Microbial activity and diversity in long-term mixed contaminated soils with respect to polyaromatic hydrocarbons and heavy metals

(2012) Palanisami Thavamani et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Spatial distribution and source apportionment of PAHs in surficial sediments of the Yangtze Estuary, China

(2012) Baohua Li et al.   MARINE POLLUTION BULLETIN

Bacterial communities are sensitive indicators of contaminant stress

(2012) Melanie Y. Sun et al.   MARINE POLLUTION BULLETIN

Testing the Limits of 454 Pyrotag Sequencing: Reproducibility, Quantitative Assessment and Comparison to T-RFLP Fingerprinting of Aquifer Microbes

(2012) Giovanni Pilloni et al.   PLoS One

Marine bacterial, archaeal and protistan association networks reveal ecological linkages

(2011) Joshua A Steele et al.   ISME Journal

Diversity and dynamics of rare and of resident bacterial populations in coastal sands

(2011) Angélique Gobet et al.   ISME Journal

Global Patterns of Bacterial Beta-Diversity in Seafloor and Seawater Ecosystems

(2011) Lucie Zinger et al.   PLoS One

High Levels of Sediment Contamination Have Little Influence on Estuarine Beach Fish Communities

(2011) Andrew C. McKinley et al.   PLoS One

Activity of abundant and rare bacteria in a coastal ocean

(2011) B. J. Campbell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Anaerobic Oxidation of Methane at a Marine Methane Seep in a Forearc Sediment Basin off Sumatra, Indian Ocean

(2011) Michael Siegert et al.   Frontiers in Microbiology

Toward Understanding, Managing, and Protecting Microbial Ecosystems

(2011) Paul L. E. Bodelier   Frontiers in Microbiology

Mercury and Other Heavy Metals Influence Bacterial Community Structure in Contaminated Tennessee Streams

(2010) Tatiana A. Vishnivetskaya et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ribosomal tag pyrosequencing of DNA and RNA from benthic coral reef microbiota: community spatial structure, rare members and nitrogen-cycling guilds

(2010) Eric Gaidos et al.   ENVIRONMENTAL MICROBIOLOGY

Novel groups of Gammaproteobacteria catalyse sulfur oxidation and carbon fixation in a coastal, intertidal sediment

(2010) Sabine Lenk et al.   ENVIRONMENTAL MICROBIOLOGY

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial communities to mitigate contamination of PAHs in soil—possibilities and challenges: a review

(2010) F. Fernández-Luqueño et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Assessing contaminated sediments in the context of multiple stressors

(2010) G. Allen Burton et al.   ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY

Prokaryotic functional diversity in different biogeochemical depth zones in tidal sediments of  the Severn Estuary, UK, revealed by stable-isotope probing

(2010) Gordon Webster et al.   FEMS MICROBIOLOGY ECOLOGY

Rising stream and river temperatures in the United States

(2010) Sujay S Kaushal et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

How a Bacterial Community Originating from a Contaminated Coastal Sediment Responds to an Oil Input

(2010) Sandrine Païssé et al.   MICROBIAL ECOLOGY

Life history determines biogeographical patterns of soil bacterial communities over multiple spatial scales

(2010) A. BISSETT et al.   MOLECULAR ECOLOGY

Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea

(2010) J. McCarren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Anthropogenic disturbance affects the structure of bacterial communities

(2009) Duane Ager et al.   ENVIRONMENTAL MICROBIOLOGY

Contaminants reduce the richness and evenness of marine communities: A review and meta-analysis

(2009) Emma L. Johnston et al.   ENVIRONMENTAL POLLUTION

Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands

(2009) Simone I Böer et al.   ISME Journal

Bacterial Community Structure of Sediments of the Bizerte Lagoon (Tunisia), a Southern Mediterranean Coastal Anthropized Lagoon

(2009) Olfa Ben Said et al.   MICROBIAL ECOLOGY

Initial community evenness favours functionality under selective stress

(2009) Lieven Wittebolle et al.   NATURE

Manganese- and Iron-Dependent Marine Methane Oxidation

(2009) E. J. Beal et al.   SCIENCE

Ecology of type II secretion in marine gammaproteobacteria

(2008) Flavia F. Evans et al.   ENVIRONMENTAL MICROBIOLOGY

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA