Comprehensive analysis of lncRNAs involved in skeletal muscle development in ZBED6-knockout Bama pigs

Identification of Novel lncRNAs Differentially Expressed in Placentas of Chinese Ningqiang Pony and Yili Horse Breeds

(2020) Yabin Pu et al.   Animals

Nrf2-lncRNA controls cell fate by modulating p53-dependent Nrf2 activation as an miRNA sponge for Plk2 and p21cip1

(2019) Min Sung Joo et al.   FASEB JOURNAL

Comprehensive Analysis of LncRNA Reveals the Temporal-Specific Module of Goat Skeletal Muscle Development

(2019) Yinghui Ling et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genome-wide discovery of lincRNAs with spatiotemporal expression patterns in the skin of goat during the cashmere growth cycle

(2018) Shen Song et al.   BMC GENOMICS

ZBED6 negatively regulates insulin production, neuronal differentiation, and cell aggregation in MIN6 cells

(2018) Xuan Wang et al.   FASEB JOURNAL

The ZBED6–IGF2 axis has a major effect on growth of skeletal muscle and internal organs in placental mammals

(2018) Shady Younis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Editing porcine IGF2 regulatory element improved meat production in Chinese Bama pigs

(2018) Guanghai Xiang et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

(2018) Xin Liu et al.   Journal of Animal Science and Biotechnology

Disruption of the ZBED6 binding site in intron 3 of IGF2 by CRISPR/Cas9 leads to enhanced muscle development in Liang Guang Small Spotted pigs

(2018) Xiaofeng Liu et al.   TRANSGENIC RESEARCH

Adiponectin, a Therapeutic Target for Obesity, Diabetes, and Endothelial Dysfunction

(2017) et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Comparative analysis of DNA methylome and transcriptome of skeletal muscle in lean-, obese- and mini-type pigs

(2017) Yalan Yang et al.   Scientific Reports

The specificity of long noncoding RNA expression

(2016) Brian S. Gloss et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Unique features of long non-coding RNA biogenesis and function

(2016) Jeffrey J. Quinn et al.   NATURE REVIEWS GENETICS

Analyses of Long Non-Coding RNA and mRNA profiling using RNA sequencing during the pre-implantation phases in pig endometrium

(2016) Yueying Wang et al.   Scientific Reports

Noncoding RNAs as epigenetic mediators of skeletal muscle regeneration

(2015) Gurjeev Sohi et al.   FEBS Journal

Long Noncoding RNA in Hematopoiesis and Immunity

(2015) Ansuman T. Satpathy et al.   IMMUNITY

Transcriptional modulatorZBED6affects cell cycle and growth of human colorectal cancer cells

(2015) Muhammad Akhtar Ali et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Co-LncRNA: investigating the lncRNA combinatorial effects in GO annotations and KEGG pathways based on human RNA-Seq data

(2015) Zheng Zhao et al.   Database-The Journal of Biological Databases and Curation

Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma

(2015) Akanksha Verma et al.   Genome Medicine

Systematic identification and characterization of long intergenic non-coding RNAs in fetal porcine skeletal muscle development

(2015) Weimin Zhao et al.   Scientific Reports

Regulation of Transcription by Long Noncoding RNAs

(2014) Roberto Bonasio et al.   Annual Review of Genetics

Genome-Wide Identification of Long Intergenic Noncoding RNA Genes and Their Potential Association with Domestication in Pigs

(2014) Zhong-Yin Zhou et al.   Genome Biology and Evolution

Identification and characterization of long intergenic non-coding RNAs related to mouse liver development

(2014) Jie Lv et al.   MOLECULAR GENETICS AND GENOMICS

ZBED6 Modulates the Transcription of Myogenic Genes in Mouse Myoblast Cells

(2014) Lin Jiang et al.   PLoS One

Long non-coding RNAs in the regulation of the immune response

(2014) James A. Heward et al.   TRENDS IN IMMUNOLOGY

X-Inactivation, Imprinting, and Long Noncoding RNAs in Health and Disease

(2013) Jeannie T. Lee et al.   CELL

Skeletal muscle hypertrophy and regeneration: interplay between the myogenic regulatory factors (MRFs) and insulin-like growth factors (IGFs) pathways

(2013) Nadège Zanou et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

The Imprinted H19 LncRNA Antagonizes Let-7 MicroRNAs

(2013) Amanda N. Kallen et al.   MOLECULAR CELL

Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts

(2013) Liang Sun et al.   NUCLEIC ACIDS RESEARCH

Transcription factor ZBED6 affects gene expression, proliferation, and cell death in pancreatic beta cells

(2013) X. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome Regulation by Long Noncoding RNAs

(2012) John L. Rinn et al.   Annual Review of Biochemistry

GENCODE: The reference human genome annotation for The ENCODE Project

(2012) J. Harrow et al.   GENOME RESEARCH

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Conserved Function of lincRNAs in Vertebrate Embryonic Development despite Rapid Sequence Evolution

(2011) Igor Ulitsky et al.   CELL

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

(2011) M. N. Cabili et al.   GENES & DEVELOPMENT

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

(2011) A. Pauli et al.   GENOME RESEARCH

Long noncoding RNAs and human disease

(2011) Orly Wapinski et al.   TRENDS IN CELL BIOLOGY

A Large Intergenic Noncoding RNA Induced by p53 Mediates Global Gene Repression in the p53 Response

(2010) Maite Huarte et al.   CELL

Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells

(2010) Sabine Loewer et al.   NATURE GENETICS

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

(2009) Mitchell Guttman et al.   NATURE

ZBED6, a Novel Transcription Factor Derived from a Domesticated DNA Transposon Regulates IGF2 Expression and Muscle Growth

(2009) Ellen Markljung et al.   PLOS BIOLOGY

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Antagonism between DNA and H3K27 Methylation at the Imprinted Rasgrf1 Locus

(2008) Anders M. Lindroth et al.   PLoS Genetics