标题
Correlated Motions in Structural Biology
作者
关键词
-
出版物
BIOCHEMISTRY
Volume 60, Issue 30, Pages 2331-2340
出版商
American Chemical Society (ACS)
发表日期
2021-07-22
DOI
10.1021/acs.biochem.1c00420
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- CryoDRGN: reconstruction of heterogeneous cryo-EM structures using neural networks
- (2021) Ellen D. Zhong et al. NATURE METHODS
- 3D variability analysis: Resolving continuous flexibility and discrete heterogeneity from single particle cryo-EM
- (2021) Ali Punjani et al. JOURNAL OF STRUCTURAL BIOLOGY
- Engineering the protein dynamics of an ancestral luciferase
- (2021) Andrea Schenkmayerova et al. Nature Communications
- The Role of Conformational Dynamics and Allostery in Modulating Protein Evolution
- (2020) Paul Campitelli et al. Annual Review of Biophysics
- Diffuse X-ray scattering from correlated motions in a protein crystal
- (2020) Steve P. Meisburger et al. Nature Communications
- Mapping allosteric communications within individual proteins
- (2020) Jian Wang et al. Nature Communications
- ‘It will change everything’: DeepMind’s AI makes gigantic leap in solving protein structures
- (2020) Ewen Callaway NATURE
- Utility of B-Factors in Protein Science: Interpreting Rigidity, Flexibility, and Internal Motion and Engineering Thermostability
- (2019) Zhoutong Sun et al. CHEMICAL REVIEWS
- Symmetry, Rigidity, and Allosteric Signaling: From Monomeric Proteins to Molecular Machines
- (2019) D. Thirumalai et al. CHEMICAL REVIEWS
- Cryo-EM reconstruction of continuous heterogeneity by Laplacian spectral volumes
- (2019) Amit Moscovich et al. INVERSE PROBLEMS
- Conformational dynamics and enzyme evolution
- (2018) Dušan Petrović et al. Journal of the Royal Society Interface
- Coevolution-based inference of amino acid interactions underlying protein function
- (2018) Victor H Salinas et al. eLife
- Intermolecular correlations are necessary to explain diffuse scattering from protein crystals
- (2018) Ariana Peck et al. IUCrJ
- John C. Kendrew and His Times
- (2017) Michael G. Rossmann JOURNAL OF MOLECULAR BIOLOGY
- Slow conformational exchange and overall rocking motion in ubiquitin protein crystals
- (2017) Vilius Kurauskas et al. Nature Communications
- Role of Conformational Dynamics in the Evolution of Retro-Aldolase Activity
- (2017) Adrian Romero-Rivera et al. ACS Catalysis
- Mix-and-diffuse serial synchrotron crystallography
- (2017) Kenneth R. Beyerlein et al. IUCrJ
- Perspective: Defining and quantifying the role of dynamics in enzyme catalysis
- (2016) Arieh Warshel et al. JOURNAL OF CHEMICAL PHYSICS
- Continuous changes in structure mapped by manifold embedding of single-particle data in cryo-EM
- (2016) Joachim Frank et al. METHODS
- Electric-field-stimulated protein mechanics
- (2016) Doeke R. Hekstra et al. NATURE
- Macromolecular diffractive imaging using imperfect crystals
- (2016) Kartik Ayyer et al. NATURE
- The role of protein dynamics in the evolution of new enzyme function
- (2016) Eleanor Campbell et al. Nature Chemical Biology
- Emergence of a catalytic tetrad during evolution of a highly active artificial aldolase
- (2016) Richard Obexer et al. Nature Chemistry
- Measuring and modeling diffuse scattering in protein X-ray crystallography
- (2016) Andrew H. Van Benschoten et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Studying dynamics by magic-angle spinning solid-state NMR spectroscopy: Principles and applications to biomolecules
- (2016) Paul Schanda et al. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
- Protein dynamics and function from solution state NMR spectroscopy
- (2016) Michael Kovermann et al. QUARTERLY REVIEWS OF BIOPHYSICS
- Prediction of allosteric sites and mediating interactions through bond-to-bond propensities
- (2016) B. R. C. Amor et al. Nature Communications
- Evolution-Based Functional Decomposition of Proteins
- (2016) Olivier Rivoire et al. PLoS Computational Biology
- Revealing Atomic-Level Mechanisms of Protein Allostery with Molecular Dynamics Simulations
- (2016) Samuel Hertig et al. PLoS Computational Biology
- Facilitating best practices in collecting anomalous scattering data forde novostructure solution at the ESRF Structural Biology Beamlines
- (2016) Daniele de Sanctis et al. Acta Crystallographica Section D-Structural Biology
- Room-temperature macromolecular crystallography using a micro-patterned silicon chip with minimal background scattering
- (2016) Philip Roedig et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Perspectives on Electrostatics and Conformational Motions in Enzyme Catalysis
- (2015) Philip Hanoian et al. ACCOUNTS OF CHEMICAL RESEARCH
- NMR studies of dynamic biomolecular conformational ensembles
- (2015) Dennis A. Torchia PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
- Molecular dynamics simulation of triclinic lysozyme in a crystal lattice
- (2015) Pawel A. Janowski et al. PROTEIN SCIENCE
- Acoustic vibrations contribute to the diffuse scatter produced by ribosome crystals
- (2015) Yury S. Polikanov et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Role of Dynamics in Enzyme Catalysis: Substantial versus Semantic Controversies
- (2014) Amnon Kohen ACCOUNTS OF CHEMICAL RESEARCH
- Biophysics of protein evolution and evolutionary protein biophysics
- (2014) T. Sikosek et al. Journal of the Royal Society Interface
- Evolution of Conformational Dynamics Determines the Conversion of a Promiscuous Generalist into a Specialist Enzyme
- (2014) T. Zou et al. MOLECULAR BIOLOGY AND EVOLUTION
- Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser
- (2014) Christopher Kupitz et al. NATURE
- The Resolution Revolution
- (2014) W. Kuhlbrandt SCIENCE
- Room-temperature macromolecular serial crystallography using synchrotron radiation
- (2014) Francesco Stellato et al. IUCrJ
- Ultimate upgrade for US synchrotron
- (2013) Eugenie Samuel Reich NATURE
- Functional significance of evolving protein sequence in dihydrofolate reductase from bacteria to humans
- (2013) C. T. Liu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Protein structural ensembles are revealed by redefining X-ray electron density noise
- (2013) P. T. Lang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Do we see what we should see? Describing non-covalent interactions in protein structures including precision
- (2013) Manickam Gurusaran et al. IUCrJ
- Linking Crystallographic Model and Data Quality
- (2012) P. A. Karplus et al. SCIENCE
- Modelling dynamics in protein crystal structures by ensemble refinement
- (2012) B Tom Burnley et al. eLife
- Hot Spots for Allosteric Regulation on Protein Surfaces
- (2011) Kimberly A. Reynolds et al. CELL
- Effects of the Donor–Acceptor Distance and Dynamics on Hydride Tunneling in the Dihydrofolate Reductase Catalyzed Reaction
- (2011) Vanja Stojković et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Femtosecond X-ray protein nanocrystallography
- (2011) Henry N. Chapman et al. NATURE
- Accessing protein conformational ensembles using room-temperature X-ray crystallography
- (2011) J. S. Fraser et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Dynamic Knockout Reveals That Conformational Fluctuations Influence the Chemical Step of Enzyme Catalysis
- (2011) G. Bhabha et al. SCIENCE
- Evaluating Elastic Network Models of Crystalline Biological Molecules with Temperature Factors, Correlated Motions, and Diffuse X-Ray Scattering
- (2010) Demian Riccardi et al. BIOPHYSICAL JOURNAL
- Simulations of a Protein Crystal with a High Resolution X-ray Structure: Evaluation of Force Fields and Water Models
- (2010) David S. Cerutti et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Allosteric Transitions in Biological Nanomachines are Described by Robust Normal Modes of Elastic Networks
- (2009) Wenjun Zheng et al. CURRENT PROTEIN & PEPTIDE SCIENCE
- X-ray free-electron lasers fire up
- (2009) Eric Hand NATURE
- Enzymatic transition states and dynamic motion in barrier crossing
- (2009) Steven D Schwartz et al. Nature Chemical Biology
- A 21st century revisionist's view at a turning point in enzymology
- (2009) Zachary D Nagel et al. Nature Chemical Biology
- Hidden dynamic allostery in a PDZ domain
- (2009) C. M. Petit et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Analysis of temperature factor distribution in high-resolution protein structures
- (2009) S. Parthasarathy et al. PROTEIN SCIENCE
- At the dawn of the 21st century: Is dynamics the missing link for understanding enzyme catalysis?
- (2009) Shina C. L. Kamerlin et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Protein Dynamism and Evolvability
- (2009) N. Tokuriki et al. SCIENCE
- Perturbation-Response Scanning Reveals Ligand Entry-Exit Mechanisms of Ferric Binding Protein
- (2009) Canan Atilgan et al. PLoS Computational Biology
- Free-Energy Landscape of Enzyme Catalysis†
- (2008) Stephen J. Benkovic et al. BIOCHEMISTRY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More