标题
Ribosome Rescue Pathways in Bacteria
作者
关键词
-
出版物
Frontiers in Microbiology
Volume 12, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2021-03-18
DOI
10.3389/fmicb.2021.652980
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Primordial Protein Tails
- (2021) Onn Brandman et al. MOLECULAR CELL
- Failure to Degrade CAT-Tailed Proteins Disrupts Neuronal Morphogenesis and Cell Survival
- (2021) Tsuyoshi Udagawa et al. Cell Reports
- Translational Control by Ribosome Pausing in Bacteria: How a Non-uniform Pace of Translation Affects Protein Production and Folding
- (2021) Ekaterina Samatova et al. Frontiers in Microbiology
- Rescuing stalled mammalian mitoribosomes – what can we learn from bacteria?
- (2020) Shreya Ahana Ayyub et al. JOURNAL OF CELL SCIENCE
- Molecular determinants of Release Factor 2 for ArfA-mediated ribosome rescue
- (2020) Daisuke Kurita et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Disruption of evolutionarily correlated tRNA elements impairs accurate decoding
- (2020) Ha An Nguyen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Escherichia coli NusG Links the Lead Ribosome with the Transcription Elongation Complex
- (2020) Robert S. Washburn et al. iScience
- Structural basis of transcription-translation coupling
- (2020) Chengyuan Wang et al. SCIENCE
- Mechanism of ribosome rescue by alternative ribosome-rescue factor B
- (2020) Kai-Hsin Chan et al. Nature Communications
- Alkylative damage of mRNA leads to ribosome stalling and rescue by trans translation in bacteria
- (2020) Erica N Thomas et al. eLife
- Mimicry of Canonical Translation Elongation Underlies Alanine Tail Synthesis in RQC
- (2020) Sebastian Filbeck et al. MOLECULAR CELL
- Structural Basis for Bacterial Ribosome-Associated Quality Control by RqcH and RqcP
- (2020) Caillan Crowe-McAuliffe et al. MOLECULAR CELL
- Elongational stalling activates mitoribosome-associated quality control
- (2020) Nirupa Desai et al. SCIENCE
- How a circularized tmRNA moves through the ribosome
- (2019) Christopher D. Rae et al. SCIENCE
- The Origin and Evolution of Release Factors: Implications for Translation Termination, Ribosome Rescue, and Quality Control Pathways
- (2019) A. Maxwell Burroughs et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Two Old Dogs, One New Trick: A Review of RNA Polymerase and Ribosome Interactions during Transcription-Translation Coupling
- (2019) Adam B. Conn et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Mechanisms and functions of ribosome-associated protein quality control
- (2019) Claudio A. P. Joazeiro NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Alanine Tails Signal Proteolysis in Bacterial Ribosome-Associated Quality Control
- (2019) Iryna Lytvynenko et al. CELL
- Structure and function of Vms1 and Arb1 in RQC and mitochondrial proteome homeostasis
- (2019) Ting Su et al. NATURE
- The structural basis for release-factor activation during translation termination revealed by time-resolved cryogenic electron microscopy
- (2019) Ziao Fu et al. Nature Communications
- Synthesis and evaluation of 1,3,4-oxadiazole derivatives for development as broad-spectrum antibiotics
- (2019) Cédric Tresse et al. BIOORGANIC & MEDICINAL CHEMISTRY
- How do cells cope with RNA damage and its consequences?
- (2019) Liewei L. Yan et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis
- (2019) Naomi Shimokawa-Chiba et al. Nature Communications
- Reassembling green fluorescent protein for in vitro evaluation of trans-translation
- (2019) Charlotte Guyomar et al. NUCLEIC ACIDS RESEARCH
- Binding and Action of Amino Acid Analogs of Chloramphenicol upon the Bacterial Ribosome
- (2018) Andrey G. Tereshchenkov et al. JOURNAL OF MOLECULAR BIOLOGY
- Conformational Control of Translation Termination on the 70S Ribosome
- (2018) Egor Svidritskiy et al. STRUCTURE
- Conformation of methylated GGQ in the Peptidyl Transferase Center during Translation Termination
- (2018) Fuxing Zeng et al. Scientific Reports
- Release of Ubiquitinated and Non-ubiquitinated Nascent Chains from Stalled Mammalian Ribosomal Complexes by ANKZF1 and Ptrh1
- (2018) Kazushige Kuroha et al. MOLECULAR CELL
- Vms1 and ANKZF1 peptidyl-tRNA hydrolases release nascent chains from stalled ribosomes
- (2018) Rati Verma et al. NATURE
- A New Mechanism for Ribosome Rescue Can Recruit RF1 or RF2 to Nonstop Ribosomes
- (2018) Tyler D. P. Goralski et al. mBio
- A Genetic Tool to Quantify trans -Translation Activity in Vivo
- (2017) Kevin Macé et al. JOURNAL OF MOLECULAR BIOLOGY
- Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P
- (2017) Paul Huter et al. MOLECULAR CELL
- Structural basis for ArfA–RF2-mediated translation termination on mRNAs lacking stop codons
- (2017) Paul Huter et al. NATURE
- Structural basis of co-translational quality control by ArfA and RF2 bound to ribosome
- (2017) Fuxing Zeng et al. NATURE
- Mechanistic insights into the alternative translation termination by ArfA and RF2
- (2017) Chengying Ma et al. NATURE
- Asc1, Hel2, and Slh1 couple translation arrest to nascent chain degradation
- (2017) Cole S. Sitron et al. RNA
- Structural Basis for Ribosome Rescue in Bacteria
- (2017) Paul Huter et al. TRENDS IN BIOCHEMICAL SCIENCES
- Ubiquitination of stalled ribosome triggers ribosome-associated quality control
- (2017) Yoshitaka Matsuo et al. Nature Communications
- In vitro analysis of RQC activities provides insights into the mechanism and function of CAT tailing
- (2017) Beatriz A Osuna et al. eLife
- Mechanism of ribosome rescue by ArfA and RF2
- (2017) Gabriel Demo et al. eLife
- The force-sensing peptide VemP employs extreme compaction and secondary structure formation to induce ribosomal stalling
- (2017) Ting Su et al. eLife
- Quality control of chemically damaged RNA
- (2016) Carrie L. Simms et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Translation regulation via nascent polypeptide-mediated ribosome stalling
- (2016) Daniel N Wilson et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Translational termination without a stop codon
- (2016) Nathan R. James et al. SCIENCE
- A combined cryo-EM and molecular dynamics approach reveals the mechanism of ErmBL-mediated translation arrest
- (2016) Stefan Arenz et al. Nature Communications
- Human Cells Require Non-stop Ribosome Rescue Activity in Mitochondria
- (2016) Heather A. Feaga et al. PLoS Genetics
- Genetic Selection of Peptide Aptamers That Interact and Inhibit Both Small Protein B and Alternative Ribosome-Rescue Factor A of Aeromonas veronii C4
- (2016) Peng Liu et al. Frontiers in Microbiology
- Structure and Assembly Pathway of the Ribosome Quality Control Complex
- (2015) Sichen Shao et al. MOLECULAR CELL
- Stall no more at polyproline stretches with the translation elongation factors EF-P and IF-5A
- (2015) Jürgen Lassak et al. MOLECULAR MICROBIOLOGY
- Mechanisms of ribosome rescue in bacteria
- (2015) Kenneth C. Keiler NATURE REVIEWS MICROBIOLOGY
- Peptide release promoted by methylated RF2 and ArfA in nonstop translation is achieved by an induced-fit mechanism
- (2015) Fuxing Zeng et al. RNA
- Rqc2p and 60S ribosomal subunits mediate mRNA-independent elongation of nascent chains
- (2015) P. S. Shen et al. SCIENCE
- Structure of the Bacillus subtilis 70S ribosome reveals the basis for species-specific stalling
- (2015) Daniel Sohmen et al. Nature Communications
- Response to the Formal Letter of Z. Chrzanowska-Lightowlers and R. N. Lightowlers Regarding Our Article “Ribosome Rescue and Translation Termination at Non-Standard Stop Codons by ICT1 in Mammalian Mitochondria”
- (2015) Nono Takeuchi et al. PLoS Genetics
- Response to “Ribosome Rescue and Translation Termination at Non-standard Stop Codons by ICT1 in Mammalian Mitochondria”
- (2015) Zofia Maria Chrzanowska-Lightowlers et al. PLoS Genetics
- Mechanisms of ribosome stalling by SecM at multiple elongation steps
- (2015) Jun Zhang et al. eLife
- Structural and functional insights into peptidyl-tRNA hydrolase
- (2014) Sujata Sharma et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- Resolving Nonstop Translation Complexes Is a Matter of Life or Death
- (2014) K. C. Keiler et al. JOURNAL OF BACTERIOLOGY
- Distinct Roles for Release Factor 1 and Release Factor 2 in Translational Quality Control
- (2014) Alexandros D. Petropoulos et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Drug Sensing by the Ribosome Induces Translational Arrest via Active Site Perturbation
- (2014) Stefan Arenz et al. MOLECULAR CELL
- The complete structure of the large subunit of the mammalian mitochondrial ribosome
- (2014) Basil J. Greber et al. NATURE
- Distinct tmRNA sequence elements facilitate RNase R engagement on rescued ribosomes for selective nonstop mRNA decay
- (2014) Krithika Venkataraman et al. NUCLEIC ACIDS RESEARCH
- ArfA recognizes the lack of mRNA in the mRNA channel after RF2 binding for ribosome rescue
- (2014) Daisuke Kurita et al. NUCLEIC ACIDS RESEARCH
- A highly conserved family of domains related to the DNA-glycosylase fold helps predict multiple novel pathways for RNA modifications
- (2014) A Maxwell Burroughs et al. RNA Biology
- Rejection of tmRNA·SmpB after GTP hydrolysis by EF-Tu on ribosomes stalled on intact mRNA
- (2014) Daisuke Kurita et al. RNA
- Structure of the large ribosomal subunit from human mitochondria
- (2014) A. Brown et al. SCIENCE
- Release of Nonstop Ribosomes Is Essential
- (2014) Heather A. Feaga et al. mBio
- Molecular Basis for the Ribosome Functioning as an L-Tryptophan Sensor
- (2014) Lukas Bischoff et al. Cell Reports
- Ribosome Rescue and Translation Termination at Non-Standard Stop Codons by ICT1 in Mammalian Mitochondria
- (2014) Shiori Akabane et al. PLoS Genetics
- Non-stop mRNA decay: a special attribute of trans-translation mediated ribosome rescue
- (2014) Krithika Venkataraman et al. Frontiers in Microbiology
- Ends of the line for tmRNA-SmpB
- (2014) Corey M. Hudson et al. Frontiers in Microbiology
- Arrest Peptides:Cis-Acting Modulators of Translation
- (2013) Koreaki Ito et al. Annual Review of Biochemistry
- Trans-translation mediates tolerance to multiple antibiotics and stresses in Escherichia coli
- (2013) J. Li et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Architecture of the large subunit of the mammalian mitochondrial ribosome
- (2013) Basil J. Greber et al. NATURE
- Identification of residues required for stalled-ribosome rescue in the codon-independent release factor YaeJ
- (2013) H. Kogure et al. NUCLEIC ACIDS RESEARCH
- Distinct XPPX sequence motifs induce ribosome stalling, which is rescued by the translation elongation factor EF-P
- (2013) L. Peil et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Small molecule inhibitors of trans-translation have broad-spectrum antibiotic activity
- (2013) N. S. Ramadoss et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Licensing and due process in the turnover of bacterial RNA
- (2013) Katarzyna J. Bandyra et al. RNA Biology
- An unusual mechanism for EF-Tu activation during tmRNA-mediated ribosome rescue
- (2013) M. R. Miller et al. RNA
- Crystal Structure of the 70S Ribosome Bound with the Q253P Mutant Form of Release Factor RF2
- (2013) Natalia Santos et al. STRUCTURE
- The task force that rescues stalled ribosomes in bacteria
- (2013) Emmanuel Giudice et al. TRENDS IN BIOCHEMICAL SCIENCES
- Mycobacterium tuberculosis possesses an unusual tmRNA rescue system
- (2013) Yoann Personne et al. TUBERCULOSIS
- Identification and characterization of CHCHD1, AURKAIP1, and CRIF1 as new members of the mammalian mitochondrial ribosome
- (2013) Emine C. Koc et al. Frontiers in Physiology
- Proteobacterial ArfA Peptides Are Synthesized from Non-stop Messenger RNAs
- (2012) Ryan E. Schaub et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Protein Synthesis Factors (RF1, RF2, RF3, RRF, and tmRNA) and Peptidyl-tRNA Hydrolase Rescue Stalled Ribosomes at Sense Codons
- (2012) Serafín Vivanco-Domínguez et al. JOURNAL OF MOLECULAR BIOLOGY
- ArfA Recruits RF2 into Stalled Ribosomes
- (2012) Yoshihiro Shimizu JOURNAL OF MOLECULAR BIOLOGY
- Evolution and Diversification of the Organellar Release Factor Family
- (2012) Isabel Duarte et al. MOLECULAR BIOLOGY AND EVOLUTION
- Multisite Ribosomal Stalling: A Unique Mode of Regulatory Nascent Chain Action Revealed for MifM
- (2012) Shinobu Chiba et al. MOLECULAR CELL
- ArfA recruits release factor 2 to rescue stalled ribosomes by peptidyl-tRNA hydrolysis inEscherichia coli
- (2012) Yuhei Chadani et al. MOLECULAR MICROBIOLOGY
- Francisella tularensis tmRNA system mutants are vulnerable to stress, avirulent in mice, and provide effective immune protection
- (2012) Anton Svetlanov et al. MOLECULAR MICROBIOLOGY
- The complex of tmRNA–SmpB and EF-G on translocating ribosomes
- (2012) David J. F. Ramrath et al. NATURE
- EF-P Is Essential for Rapid Synthesis of Proteins Containing Consecutive Proline Residues
- (2012) L. K. Doerfel et al. SCIENCE
- Translation Elongation Factor EF-P Alleviates Ribosome Stalling at Polyproline Stretches
- (2012) S. Ude et al. SCIENCE
- Structural Basis for the Rescue of Stalled Ribosomes: Structure of YaeJ Bound to the Ribosome
- (2012) M. G. Gagnon et al. SCIENCE
- Decoding in the Absence of a Codon by tmRNA and SmpB in the Ribosome
- (2012) C. Neubauer et al. SCIENCE
- Condition-Dependent Transcriptome Reveals High-Level Regulatory Architecture in Bacillus subtilis
- (2012) P. Nicolas et al. SCIENCE
- A Primary Role for Release Factor 3 in Quality Control during Translation Elongation in Escherichia coli
- (2011) Hani S. Zaher et al. CELL
- Dissociation by Pelota, Hbs1 and ABCE1 of mammalian vacant 80S ribosomes and stalled elongation complexes
- (2011) Vera P Pisareva et al. EMBO JOURNAL
- trans-translation-mediated tight regulation of the expression of the alternative ribosome-rescue factor ArfA in Escherichia coli
- (2011) Yuhei Chadani et al. GENES & GENETIC SYSTEMS
- tmRNA regulates synthesis of the ArfA ribosome rescue factor
- (2011) Fernando Garza-Sánchez et al. MOLECULAR MICROBIOLOGY
- Escherichia coli YaeJ protein mediates a novel ribosome-rescue pathway distinct from SsrA- and ArfA-mediated pathways
- (2011) Yuhei Chadani et al. MOLECULAR MICROBIOLOGY
- Nascentome Analysis Uncovers Futile Protein Synthesis in Escherichia coli
- (2011) Koreaki Ito et al. PLoS One
- The role of SmpB and the ribosomal decoding center in licensing tmRNA entry into stalled ribosomes
- (2011) M. R. Miller et al. RNA
- Visualizing the transfer-messenger RNA as the ribosome resumes translation
- (2010) Jie Fu et al. EMBO JOURNAL
- tmRNA–SmpB: a journey to the centre of the bacterial ribosome
- (2010) Félix Weis et al. EMBO JOURNAL
- Recognition of the amber UAG stop codon by release factor RF1
- (2010) Andrei Korostelev et al. EMBO JOURNAL
- A functional peptidyl-tRNA hydrolase, ICT1, has been recruited into the human mitochondrial ribosome
- (2010) Ricarda Richter et al. EMBO JOURNAL
- SsrA (tmRNA) acts as an antisense RNA to regulateStaphylococcus aureuspigment synthesis by base pairing withcrtMNmRNA
- (2010) Yu Liu et al. FEBS LETTERS
- Solution Structure of the Catalytic Domain of the Mitochondrial Protein ICT1 That Is Essential for Cell Vitality
- (2010) Yoshihiro Handa et al. JOURNAL OF MOLECULAR BIOLOGY
- Non-stop mRNA decay initiates at the ribosome
- (2010) Zhiyun Ge et al. MOLECULAR MICROBIOLOGY
- Ribosome rescue by Escherichia coli ArfA (YhdL) in the absence of trans-translation system
- (2010) Yuhei Chadani et al. MOLECULAR MICROBIOLOGY
- YaeJ is a novel ribosome-associated protein in Escherichia coli that can hydrolyze peptidyl-tRNA on stalled ribosomes
- (2010) Y. Handa et al. NUCLEIC ACIDS RESEARCH
- Kinetic basis for global loss of fidelity arising from mismatches in the P-site codon:anticodon helix
- (2010) H. S. Zaher et al. RNA
- Role of the C-terminal tail of SmpB in the early stage of trans-translation
- (2010) D. Kurita et al. RNA
- Dom34:Hbs1 Promotes Subunit Dissociation and Peptidyl-tRNA Drop-Off to Initiate No-Go Decay
- (2010) C. J. Shoemaker et al. SCIENCE
- The Structural Basis for mRNA Recognition and Cleavage by the Ribosome-Dependent Endonuclease RelE
- (2009) Cajetan Neubauer et al. CELL
- A novel class of bacterial translation factor RF3 mutations suggests specific structural domains for premature peptidyl-tRNA drop-off
- (2009) Yuya Watanabe et al. FEBS LETTERS
- tmRNA·SmpB complex mimics native aminoacyl-tRNAs in the A site of stalled ribosomes
- (2009) Kimberley Cheng et al. JOURNAL OF STRUCTURAL BIOLOGY
- RNase II is important for A-site mRNA cleavage during ribosome pausing
- (2009) Fernando Garza-Sánchez et al. MOLECULAR MICROBIOLOGY
- Accommodation of tmRNA-SmpB into stalled ribosomes: A cryo-EM study
- (2009) F. Weis et al. RNA
- Structural Insight into Nascent Polypeptide Chain-Mediated Translational Stalling
- (2009) B. Seidelt et al. SCIENCE
- The Crystal Structure of the Ribosome Bound to EF-Tu and Aminoacyl-tRNA
- (2009) T. M. Schmeing et al. SCIENCE
- Biology oftrans-Translation
- (2008) Kenneth C. Keiler Annual Review of Microbiology
- RNA under attack: Cellular handling of RNA damage
- (2008) Elisabeth J. Wurtmann et al. CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY
- Amino Acid Starvation and Colicin D Treatment Induce A-site mRNA Cleavage in Escherichia coli
- (2008) Fernando Garza-Sánchez et al. JOURNAL OF MOLECULAR BIOLOGY
- Recycling of Ribosomal Complexes Stalled at the Step of Elongation in Escherichia coli
- (2008) Nongmaithem Sadananda Singh et al. JOURNAL OF MOLECULAR BIOLOGY
- Recycling of Aborted Ribosomal 50S Subunit-Nascent Chain-tRNA Complexes by the Heat Shock Protein Hsp15
- (2008) Linhua Jiang et al. JOURNAL OF MOLECULAR BIOLOGY
- Quality control by the ribosome following peptide bond formation
- (2008) Hani S. Zaher et al. NATURE
- Structural basis for translation termination on the 70S ribosome
- (2008) Martin Laurberg et al. NATURE
- Minigene-like inhibition of protein synthesis mediated by hungry codons near the start codon
- (2008) E. Jacinto-Loeza et al. NUCLEIC ACIDS RESEARCH
- Crystal structure of a translation termination complex formed with release factor RF2
- (2008) A. Korostelev et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- NMR structure of the peptidyl-tRNA hydrolase domain fromPseudomonas syringae expands the structural coverage of the hydrolysis domains of class 1 peptide chain release factors
- (2008) Kiran Kumar Singarapu et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Insights into Translational Termination from the Structure of RF2 Bound to the Ribosome
- (2008) A. Weixlbaumer et al. SCIENCE
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