Sifting environmental DNA metabarcoding data sets for rapid reconstruction of marine food webs
出版年份 2021 全文链接
标题
Sifting environmental DNA metabarcoding data sets for rapid reconstruction of marine food webs
作者
关键词
-
出版物
FISH AND FISHERIES
Volume -, Issue -, Pages -
出版商
Wiley
发表日期
2021-04-10
DOI
10.1111/faf.12553
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Environmental DNA reveals seasonal shifts and potential interactions in a marine community
- (2020) Anni Djurhuus et al. Nature Communications
- Environmental DNA can act as a biodiversity barometer of anthropogenic pressures in coastal ecosystems
- (2020) Joseph D. DiBattista et al. Scientific Reports
- Executing multi-taxa eDNA ecological assessment via traditional metrics and interactive networks
- (2020) Mathew Seymour et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring
- (2020) Jan Pawlowski et al. MOLECULAR ECOLOGY
- Environmental DNA effectively captures functional diversity of coastal fish communities
- (2020) Giorgio Aglieri et al. MOLECULAR ECOLOGY
- Marine environmental DNA biomonitoring reveals seasonal patterns in biodiversity and identifies ecosystem responses to anomalous climatic events
- (2019) Tina E. Berry et al. PLoS Genetics
- Reconstructing hyperdiverse food webs: gut content metabarcoding as a tool to disentangle trophic interactions on coral reefs
- (2019) J. M. Casey et al. Methods in Ecology and Evolution
- Non‐specific amplification compromises environmental DNA metabarcoding with COI
- (2019) Rupert A. Collins et al. Methods in Ecology and Evolution
- Using vertebrate environmental DNA from seawater in biomonitoring of marine habitats
- (2019) Eva Egelyng Sigsgaard et al. CONSERVATION BIOLOGY
- Feeding studies take guts – critical review and recommendations of methods for stomach contents analysis in fish
- (2019) Per‐Arne Amundsen et al. JOURNAL OF FISH BIOLOGY
- Ecological redundancy between coral reef sharks and predatory teleosts
- (2019) Shanta C. Barley et al. REVIEWS IN FISH BIOLOGY AND FISHERIES
- Recent pace of change in human impact on the world’s ocean
- (2019) Benjamin S. Halpern et al. Scientific Reports
- Habitat Heterogeneity and Connectivity: Effects on the Planktonic Protist Community Structure at Two Adjacent Coastal Sites (the Lagoon and the Gulf of Venice, Northern Adriatic Sea, Italy) Revealed by Metabarcoding
- (2019) Simona Armeli Minicante et al. Frontiers in Microbiology
- Network-Based Biomonitoring: Exploring Freshwater Food Webs With Stable Isotope Analysis and DNA Metabarcoding
- (2019) Zacchaeus G. Compson et al. Frontiers in Ecology and Evolution
- Network analysis reveals multispecies spatial associations in the shark community of a Caribbean marine protected area
- (2019) GA Casselberry et al. MARINE ECOLOGY PROGRESS SERIES
- Biodiversity assessment of tropical shelf eukaryotic communities via pelagic eDNA metabarcoding
- (2019) Judith Bakker et al. Ecology and Evolution
- The sceptical optimist: challenges and perspectives for the application of environmental DNA in marine fisheries
- (2018) Brian Klitgaard Hansen et al. FISH AND FISHERIES
- The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems
- (2018) Jan Pawlowski et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Environmental DNA illuminates the dark diversity of sharks
- (2018) Germain Boussarie et al. Science Advances
- Uses and Misuses of Environmental DNA in Biodiversity Science and Conservation
- (2018) Melania E. Cristescu et al. Annual Review of Ecology Evolution and Systematics
- Stronger predation in a subtropical community dampens an invasive species-induced trophic cascade
- (2018) Katherine J. Papacostas et al. BIOLOGICAL INVASIONS
- Integrating complementary methods to improve diet analysis in fishery-targeted species
- (2018) Jordan K. Matley et al. Ecology and Evolution
- DNA metabarcoding unveils multiscale trophic variation in a widespread coastal opportunist
- (2018) Andjin Siegenthaler et al. MOLECULAR ECOLOGY
- Diet and trophic interactions of a circumglobally significant gelatinous marine zooplankter, Dolioletta gegenbauri (Uljanin, 1884)
- (2018) Tina L. Walters et al. MOLECULAR ECOLOGY
- Environmental DNA (eDNA) metabarcoding reveals strong discrimination among diverse marine habitats connected by water movement
- (2018) Gert-Jan Jeunen et al. Molecular Ecology Resources
- Predicting the Ecological Quality Status of Marine Environments from eDNA Metabarcoding Data Using Supervised Machine Learning
- (2017) Tristan Cordier et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Temperate rocky subtidal reef community reveals human impacts across the entire food web
- (2017) A Pérez-Matus et al. MARINE ECOLOGY PROGRESS SERIES
- High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding
- (2017) Julie C. McInnes et al. MOLECULAR ECOLOGY
- Pellets of proof: First glimpse of the dietary composition of adult odonates as revealed by metabarcoding of feces
- (2017) Kari M. Kaunisto et al. Ecology and Evolution
- Temperate rocky subtidal reef community reveals human impacts across the entire food web
- (2017) A Pérez-Matus et al. MARINE ECOLOGY PROGRESS SERIES
- Environmental DNA reveals tropical shark diversity in contrasting levels of anthropogenic impact
- (2017) Judith Bakker et al. Scientific Reports
- Direct and indirect trophic effects of predator depletion on basal trophic levels
- (2016) Huili Chen et al. ECOLOGY
- Modelling climate change impacts on marine fish populations: process-based integration of ocean warming, acidification and other environmental drivers
- (2016) Stefan Koenigstein et al. FISH AND FISHERIES
- Camera technology for monitoring marine biodiversity and human impact
- (2016) Anthony WJ Bicknell et al. FRONTIERS IN ECOLOGY AND THE ENVIRONMENT
- The use of DNA barcodes in food web construction—terrestrial and aquatic ecologists unite!
- (2016) Tomas Roslin et al. GENOME
- Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding
- (2016) Alice Valentini et al. MOLECULAR ECOLOGY
- The Ecological Role of Sharks on Coral Reefs
- (2016) George Roff et al. TRENDS IN ECOLOGY & EVOLUTION
- Anthropogenic effects are associated with a lower persistence of marine food webs
- (2016) Luis J. Gilarranz et al. Nature Communications
- Critical considerations for the application of environmental DNA methods to detect aquatic species
- (2016) Caren S. Goldberg et al. Methods in Ecology and Evolution
- The ecology of environmental DNA and implications for conservation genetics
- (2015) Matthew A. Barnes et al. CONSERVATION GENETICS
- Quantitative DNA metabarcoding: improved estimates of species proportional biomass using correction factors derived from control material
- (2015) Austen C. Thomas et al. Molecular Ecology Resources
- Exposing the structure of an Arctic food web
- (2015) Helena K. Wirta et al. Ecology and Evolution
- Toward accurate molecular identification of species in complex environmental samples: testing the performance of sequence filtering and clustering methods
- (2015) Jullien M. Flynn et al. Ecology and Evolution
- Metabarcoding dietary analysis of coral dwelling predatory fish demonstrates the minor contribution of coral mutualists to their highly partitioned, generalist diet
- (2015) Matthieu Leray et al. PeerJ
- Molecular detection of trophic interactions: emerging trends, distinct advantages, significant considerations and conservation applications
- (2014) Elizabeth L. Clare Evolutionary Applications
- Environmental DNA for wildlife biology and biodiversity monitoring
- (2014) Kristine Bohmann et al. TRENDS IN ECOLOGY & EVOLUTION
- Rescaling the trophic structure of marine food webs
- (2013) Nigel E. Hussey et al. ECOLOGY LETTERS
- Fish gut content analysis: robust measures of diet composition
- (2013) Ronald Baker et al. FISH AND FISHERIES
- Genomics in marine monitoring: New opportunities for assessing marine health status
- (2013) Sarah J. Bourlat et al. MARINE POLLUTION BULLETIN
- DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet
- (2013) M. De Barba et al. Molecular Ecology Resources
- Current state and trends in Canadian Arctic marine ecosystems: II. Heterotrophic food web, pelagic-benthic coupling, and biodiversity
- (2012) Gérald Darnis et al. CLIMATIC CHANGE
- Spatio-temporal variation of suspended and sedimentary organic matter quality in the Bay of Marseilles (NW Mediterranean) assessed by biochemical and isotopic analyses
- (2012) Pierre Cresson et al. MARINE POLLUTION BULLETIN
- Next-generation sequencing technologies for environmental DNA research
- (2012) SHADI SHOKRALLA et al. MOLECULAR ECOLOGY
- Towards next-generation biodiversity assessment using DNA metabarcoding
- (2012) PIERRE TABERLET et al. MOLECULAR ECOLOGY
- Sequencing our way towards understanding global eukaryotic biodiversity
- (2012) Holly M. Bik et al. TRENDS IN ECOLOGY & EVOLUTION
- Cheddar: analysis and visualisation of ecological communities in R
- (2012) Lawrence N. Hudson et al. Methods in Ecology and Evolution
- Sources of variability and comparability between salmonid stomach contents and isotopic analyses: study design lessons and recommendations
- (2011) Mark R. Vinson et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- Tracking apex marine predator movements in a dynamic ocean
- (2011) B. A. Block et al. NATURE
- Intrapopulation Variability Shaping Isotope Discrimination and Turnover: Experimental Evidence in Arctic Foxes
- (2011) Nicolas Lecomte et al. PLoS One
- Barcoding a Quantified Food Web: Crypsis, Concepts, Ecology and Hypotheses
- (2011) M. Alex Smith et al. PLoS One
- Lower trophic levels and detrital biomass control the Bay of Biscay continental shelf food web: Implications for ecosystem management
- (2011) G. Lassalle et al. PROGRESS IN OCEANOGRAPHY
- Weaving marine food webs from end to end under global change
- (2010) Coleen L. Moloney et al. JOURNAL OF MARINE SYSTEMS
- From Sea to Sea: Canada's Three Oceans of Biodiversity
- (2010) Philippe Archambault et al. PLoS One
- The importance of monitoring and evaluation in adaptive maritime spatial planning
- (2010) Fanny Douvere et al. JOURNAL OF COASTAL CONSERVATION
- Invasive species cause large-scale loss of native California oyster habitat by disrupting trophic cascades
- (2009) David L. Kimbro et al. OECOLOGIA
- Disentangling the Web of Life
- (2009) Jordi Bascompte SCIENCE
- Incorporating uncertainty and prior information into stable isotope mixing models
- (2008) Jonathan W. Moore et al. ECOLOGY LETTERS
- Structural Degradation in Mediterranean Sea Food Webs: Testing Ecological Hypotheses Using Stochastic and Mass-Balance Modelling
- (2008) Marta Coll et al. ECOSYSTEMS
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