Metabarcoding dietary analysis of coral dwelling predatory fish demonstrates the minor contribution of coral mutualists to their highly partitioned, generalist diet

Fringing reefs exposed to different levels of eutrophication and sedimentation can support similar benthic communities

(2015) H. Rouzé et al.   MARINE POLLUTION BULLETIN

DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity

(2015) Matthieu Leray et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Juvenile Trapezia spp. crabs can increase juvenile host coral survival by protection from predation

(2014) H Rouzé et al.   MARINE ECOLOGY PROGRESS SERIES

Cover Cropping Alters the Diet of Arthropods in a Banana Plantation: A Metabarcoding Approach

(2014) Gregory Mollot et al.   PLoS One

Species and size diversity in protective services offered by coral guard-crabs

(2014) C. Seabird McKeon et al.   PeerJ

Predators alter community organization of coral reef cryptofauna and reduce abundance of coral mutualists

(2013) A. C. Stier et al.   CORAL REEFS

A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents

(2013) Matthieu Leray et al.   Frontiers in Zoology

Redesign of PCR primers for mitochondrial cytochromecoxidase subunit I for marine invertebrates and application in all-taxa biotic surveys

(2013) J. Geller et al.   Molecular Ecology Resources

Effectiveness of Annealing Blocking Primers versus Restriction Enzymes for Characterization of Generalist Diets: Unexpected Prey Revealed in the Gut Contents of Two Coral Reef Fish Species

(2013) Matthieu Leray et al.   PLoS One

Molecular evidence for dietary selectivity and pest suppression potential in an epigeal spider community in winter wheat

(2012) Eric G. Chapman et al.   BIOLOGICAL CONTROL

Cymo melanodactylus crabs slow progression of white syndrome lesions on corals

(2012) F. J. Pollock et al.   CORAL REEFS

Towards next-generation biodiversity assessment using DNA metabarcoding

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Prey Preference of Snow Leopard (Panthera uncia) in South Gobi, Mongolia

(2012) Wasim Shehzad et al.   PLoS One

Housekeeping Mutualisms: Do More Symbionts Facilitate Host Performance?

(2012) Adrian C. Stier et al.   PLoS One

Acanthaster planci Outbreak: Decline in Coral Health, Coral Size Structure Modification and Consequences for Obligate Decapod Assemblages

(2012) Matthieu Leray et al.   PLoS One

Predator Crown-of-Thorns Starfish (Acanthaster planci) Outbreak, Mass Mortality of Corals, and Cascading Effects on Reef Fish and Benthic Communities

(2012) Mohsen Kayal et al.   PLoS One

Clustering 16S rRNA for OTU prediction: a method of unsupervised Bayesian clustering

(2011) Xiaolin Hao et al.   BIOINFORMATICS

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

Taxonomy and life history of the Acropora-eating flatworm Amakusaplana acroporae nov. sp. (Polycladida: Prosthiostomidae)

(2011) K. A. Rawlinson et al.   CORAL REEFS

Moorea BIOCODE barcode library as a tool for understanding predator–prey interactions: insights into the diet of common predatory coral reef fishes

(2011) M. Leray et al.   CORAL REEFS

Associational refuges among corals mediate impacts of a crown-of-thorns starfish Acanthaster planci outbreak

(2011) Mohsen Kayal et al.   CORAL REEFS

Influence of management practices on large herbivore diet—Case of European bison in Białowieża Primeval Forest (Poland)

(2011) Rafał Kowalczyk et al.   FOREST ECOLOGY AND MANAGEMENT

Who is eating what: diet assessment using next generation sequencing

(2011) FRANCOIS POMPANON et al.   MOLECULAR ECOLOGY

Indirect effects of species interactions on habitat provisioning

(2011) Sally J. Holbrook et al.   OECOLOGIA

MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons

(2011) Vincent Ranwez et al.   PLoS One

Climate Change, Keystone Predation, and Biodiversity Loss

(2011) C. D. G. Harley   SCIENCE

The vermetid gastropod Dendropoma maximum reduces coral growth and survival

(2010) J. S. Shima et al.   Biology Letters

Predators reduce abundance and species richness of coral reef fish recruits via non-selective predation

(2010) J. M. Heinlein et al.   CORAL REEFS

Guard crabs alleviate deleterious effects of vermetid snails on a branching coral

(2010) A. C. Stier et al.   CORAL REEFS

Variation in the structure of epifaunal invertebrate assemblages among coral hosts

(2010) J. S. Stella et al.   CORAL REEFS

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

The Impact of Climate Change on the World's Marine Ecosystems

(2010) O. Hoegh-Guldberg et al.   SCIENCE

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Zooplankton diversity analysis through single-gene sequencing of a community sample

(2009) Ryuji J Machida et al.   BMC GENOMICS

Reef-associated crustacean fauna: biodiversity estimates using semi-quantitative sampling and DNA barcoding

(2009) L. Plaisance et al.   CORAL REEFS

Recurrent disturbances, recovery trajectories, and resilience of coral assemblages on a South Central Pacific reef

(2009) M. Adjeroud et al.   CORAL REEFS

Cryptic dietary components reduce dietary overlap among sympatric butterflyfishes (Chaetodontidae)

(2009) I. Nagelkerken et al.   JOURNAL OF FISH BIOLOGY

Blocking primers to enhance PCR amplification of rare sequences in mixed samples – a case study on prey DNA in Antarctic krill stomachs

(2008) Hege Vestheim et al.   Frontiers in Zoology

Interspecific variation in distributions and diets of coral reef butterflyfishes (Teleostei: Chaetodontidae)

(2008) M. S. Pratchett et al.   JOURNAL OF FISH BIOLOGY

Food resource use in a tropical eastern Pacific tidepool fish assemblage

(2008) Gustavo Adolfo Castellanos-Galindo et al.   MARINE BIOLOGY

Effects of sheltering fish on growth of their host corals

(2008) Sally J. Holbrook et al.   MARINE BIOLOGY

Impact of coral predators on tropical reefs

(2008) RD Rotjan et al.   MARINE ECOLOGY PROGRESS SERIES

Statistical Assignment of DNA Sequences Using Bayesian Phylogenetics

(2008) Kasper Munch et al.   SYSTEMATIC BIOLOGY