Shared ancestral polymorphisms and chromosomal rearrangements as potential drivers of local adaptation in a marine fish
出版年份 2020 全文链接
标题
Shared ancestral polymorphisms and chromosomal rearrangements as potential drivers of local adaptation in a marine fish
作者
关键词
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出版物
MOLECULAR ECOLOGY
Volume 29, Issue 13, Pages 2379-2398
出版商
Wiley
发表日期
2020-06-05
DOI
10.1111/mec.15499
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Matching habitat choice: it's not for everyone
- (2020) Carlos Camacho et al. OIKOS
- Dating genomic variants and shared ancestry in population-scale sequencing data
- (2020) Patrick K. Albers et al. PLOS BIOLOGY
- Combining population genomics and forward simulations to investigate stocking impacts: A case study of Muskellunge (Esox masquinongy ) from the St. Lawrence River basin
- (2019) Quentin Rougemont et al. Evolutionary Applications
- Standing genetic variation as the predominant source for adaptation of a songbird
- (2019) Yu-Ting Lai et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolving Inversions
- (2019) Rui Faria et al. TRENDS IN ECOLOGY & EVOLUTION
- Going beyond SNPs: the role of structural genomic variants in adaptive evolution and species diversification
- (2019) Maren Wellenreuther et al. MOLECULAR ECOLOGY
- Parallel pattern of differentiation at a genomic island shared between clinal and mosaic hybrid zones in a complex of cryptic seahorse lineages
- (2019) Florentine Riquet et al. EVOLUTION
- Matching habitat choice and plasticity contribute to phenotype–environment covariation in a stream salamander
- (2019) Winsor H. Lowe et al. ECOLOGY
- Adaptive introgression enables evolutionary rescue from extreme environmental pollution
- (2019) Elias M. Oziolor et al. SCIENCE
- Comparing Pool‐seq, Rapture, and GBS genotyping for inferring weak population structure: The American lobster ( Homarus americanus ) as a case study
- (2019) Yann Dorant et al. Ecology and Evolution
- A chromosome-level assembly of the Atlantic herring genome—detection of a supergene and other signals of selection
- (2019) Mats E. Pettersson et al. GENOME RESEARCH
- Standing genetic variation fuels rapid adaptation to ocean acidification
- (2019) M. C. Bitter et al. Nature Communications
- Low tolerance of salt water in a marine fish: new and historical evidence for surprising local adaption in the well-studied commercially exploited capelin
- (2018) Craig F. Purchase CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- The demographic history of Atlantic salmon (Salmo salar ) across its distribution range reconstructed from approximate Bayesian computations*
- (2018) Quentin Rougemont et al. EVOLUTION
- Detecting the genomic signal of polygenic adaptation and the role of epistasis in evolution
- (2018) Katalin Csilléry et al. MOLECULAR ECOLOGY
- Comparing methods for detecting multilocus adaptation with multivariate genotype-environment associations
- (2018) Brenna R. Forester et al. MOLECULAR ECOLOGY
- Intercontinental karyotype–environment parallelism supports a role for a chromosomal inversion in local adaptation in a seaweed fly
- (2018) Claire Mérot et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Eco-Evolutionary Genomics of Chromosomal Inversions
- (2018) Maren Wellenreuther et al. TRENDS IN ECOLOGY & EVOLUTION
- diploS/HIC: An Updated Approach to Classifying Selective Sweeps
- (2018) Andrew D. Kern et al. G3-Genes Genomes Genetics
- A climate-associated multispecies cryptic cline in the northwest Atlantic
- (2018) Ryan R. E. Stanley et al. Science Advances
- Analysis of Genome-Wide Differentiation between Native and Introduced Populations of the Cupped Oysters Crassostrea gigas and Crassostrea angulata
- (2018) Pierre-Alexandre Gagnaire et al. Genome Biology and Evolution
- Local PCA Shows How the Effect of Population Structure Differs Along the Genome
- (2018) Han Li et al. GENETICS
- Chromosomal fusion and life history-associated genomic variation contribute to within-river local adaptation of Atlantic salmon
- (2018) Kyle Wellband et al. MOLECULAR ECOLOGY
- Putatively adaptive genetic variation in the giant California sea cucumber ( Parastichopus californicus ) as revealed by environmental association analysis of restriction‐site associated DNA sequencing data
- (2018) Amanda Xuereb et al. MOLECULAR ECOLOGY
- Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions
- (2017) P R Berg et al. HEREDITY
- Linked selection, demography and the evolution of correlated genomic landscapes in birds and beyond
- (2017) Reto Burri MOLECULAR ECOLOGY
- Genome architecture enables local adaptation of Atlantic cod despite high connectivity
- (2017) Julia M. I. Barth et al. MOLECULAR ECOLOGY
- Genomics and telemetry suggest a role for migration harshness in determining overwintering habitat choice, but not gene flow, in anadromous Arctic Char
- (2017) Jean-Sébastien Moore et al. MOLECULAR ECOLOGY
- Extensive recent secondary contacts between four European white oak species
- (2017) Thibault Leroy et al. NEW PHYTOLOGIST
- Gene flow favours local adaptation under habitat choice in ciliate microcosms
- (2017) Staffan Jacob et al. Nature Ecology & Evolution
- Identifying patterns of dispersal, connectivity and selection in the sea scallop,Placopecten magellanicus,using RADseq-derived SNPs
- (2016) Mallory Van Wyngaarden et al. Evolutionary Applications
- A decade of seascape genetics: contributions to basic and applied marine connectivity
- (2016) KA Selkoe et al. MARINE ECOLOGY PROGRESS SERIES
- Variation in Linked Selection and Recombination Drive Genomic Divergence during Allopatric Speciation of European and American Aspens
- (2016) Jing Wang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genomics of local adaptation with gene flow
- (2016) Anna Tigano et al. MOLECULAR ECOLOGY
- Parallel genetic divergence among coastal-marine ecotype pairs of European anchovy explained by differential introgression after secondary contact
- (2016) A. Le Moan et al. MOLECULAR ECOLOGY
- Inferring the demographic history underlying parallel genomic divergence among pairs of parasitic and nonparasitic lamprey ecotypes
- (2016) Quentin Rougemont et al. MOLECULAR ECOLOGY
- Controlling false discoveries in genome scans for selection
- (2016) Olivier François et al. MOLECULAR ECOLOGY
- Seascape genomics provides evidence for thermal adaptation and current-mediated population structure in American lobster (Homarus americanus )
- (2016) Laura Benestan et al. MOLECULAR ECOLOGY
- Breaking RAD: an evaluation of the utility of restriction site-associated DNA sequencing for genome scans of adaptation
- (2016) David B. Lowry et al. Molecular Ecology Resources
- The life aquatic: advances in marine vertebrate genomics
- (2016) Joanna L. Kelley et al. NATURE REVIEWS GENETICS
- Shedding Light on the Grey Zone of Speciation along a Continuum of Genomic Divergence
- (2016) Camille Roux et al. PLOS BIOLOGY
- A decade of seascape genetics: contributions to basic and applied marine connectivity
- (2016) KA Selkoe et al. MARINE ECOLOGY PROGRESS SERIES
- A genomic selection component analysis characterizes migration-selection balance
- (2015) Patrick J. Monnahan et al. EVOLUTION
- Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum ofFicedulaflycatchers
- (2015) Reto Burri et al. GENOME RESEARCH
- Exploring Diallelic Genetic Markers: TheHardyWeinbergPackage
- (2015) Jan Graffelman Journal of Statistical Software
- Tree of Life Reveals Clock-Like Speciation and Diversification
- (2015) S. Blair Hedges et al. MOLECULAR BIOLOGY AND EVOLUTION
- The consequences of not accounting for background selection in demographic inference
- (2015) Gregory B. Ewing et al. MOLECULAR ECOLOGY
- RAD sequencing reveals within-generation polygenic selection in response to anthropogenic organic and metal contamination in North Atlantic Eels
- (2015) M. Laporte et al. MOLECULAR ECOLOGY
- Evidence for archaic adaptive introgression in humans
- (2015) Fernando Racimo et al. NATURE REVIEWS GENETICS
- LEA: AnRpackage for landscape and ecological association studies
- (2015) Eric Frichot et al. Methods in Ecology and Evolution
- Can we continue to neglect genomic variation in introgression rates when inferring the history of speciation? A case study in aMytilushybrid zone
- (2014) C. Roux et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- Standing and flowing: the complex origins of adaptive variation
- (2014) John J. Welch et al. MOLECULAR ECOLOGY
- Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow
- (2014) Tami E. Cruickshank et al. MOLECULAR ECOLOGY
- Bottom-Up Regulation of Capelin, a Keystone Forage Species
- (2014) Alejandro D. Buren et al. PLoS One
- European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation
- (2014) Mbaye Tine et al. Nature Communications
- A practical guide to measuring local adaptation
- (2013) François Blanquart et al. ECOLOGY LETTERS
- Crossing the Species Barrier: Genomic Hotspots of Introgression between Two Highly Divergent Ciona intestinalis Species
- (2013) Camille Roux et al. MOLECULAR BIOLOGY AND EVOLUTION
- Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models
- (2013) Eric Frichot et al. MOLECULAR BIOLOGY AND EVOLUTION
- Stacks: an analysis tool set for population genomics
- (2013) Julian Catchen et al. MOLECULAR ECOLOGY
- Adaptive introgression in animals: examples and comparison to new mutation and standing variation as sources of adaptive variation
- (2013) Philip W. Hedrick MOLECULAR ECOLOGY
- StAMPP: an R package for calculation of genetic differentiation and structure of mixed-ploidy level populations
- (2013) Luke W. Pembleton et al. Molecular Ecology Resources
- Understanding the origin of species with genome-scale data: modelling gene flow
- (2013) Vitor Sousa et al. NATURE REVIEWS GENETICS
- Ecological genomics of local adaptation
- (2013) Outi Savolainen et al. NATURE REVIEWS GENETICS
- Collinearity: a review of methods to deal with it and a simulation study evaluating their performance
- (2012) Carsten F. Dormann et al. ECOGRAPHY
- Thermohaline tolerance and embryonic development in capelin eggs (Mallotus villosus) from the Northeast Atlantic Ocean
- (2012) Kim Præbel et al. ENVIRONMENTAL BIOLOGY OF FISHES
- A Critical Assessment of Storytelling: Gene Ontology Categories and the Importance of Validating Genomic Scans
- (2012) Pavlos Pavlidis et al. MOLECULAR BIOLOGY AND EVOLUTION
- Characterizing genomic variation ofArabidopsis thaliana: the roles of geography and climate
- (2012) JESSE R. LASKY et al. MOLECULAR ECOLOGY
- Investigation of Inversion Polymorphisms in the Human Genome Using Principal Components Analysis
- (2012) Jianzhong Ma et al. PLoS One
- Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring
- (2012) S. Lamichhaney et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolution of Migration in a Periodically Changing Environment
- (2011) F. Blanquart et al. AMERICAN NATURALIST
- A Genome-wide SNP Genotyping Array Reveals Patterns of Global and Repeated Species-Pair Divergence in Sticklebacks
- (2011) Felicity C. Jones et al. CURRENT BIOLOGY
- ESTABLISHMENT AND MAINTENANCE OF ADAPTIVE GENETIC DIVERGENCE UNDER MIGRATION, SELECTION, AND DRIFT
- (2011) Sam Yeaman et al. EVOLUTION
- Historical introgression and the role of selective vs. neutral processes in structuring nuclear genetic variation (AFLP) in a circumpolar marine fish, the capelin (Mallotus villosus)
- (2011) GABRIEL J. COLBECK et al. MOLECULAR ECOLOGY
- The coupling hypothesis: why genome scans may fail to map local adaptation genes
- (2011) NICOLAS BIERNE et al. MOLECULAR ECOLOGY
- Does Speciation between Arabidopsis halleri and Arabidopsis lyrata Coincide with Major Changes in a Molecular Target of Adaptation?
- (2011) Camille Roux et al. PLoS One
- Adaptation – not by sweeps alone
- (2010) Jonathan K. Pritchard et al. NATURE REVIEWS GENETICS
- Adaptations to new environments in humans: the role of subtle allele frequency shifts
- (2010) A. M. Hancock et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature
- (2010) I. R. Bradbury et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Chromosomal speciation revisited: rearranging theory with pieces of evidence
- (2010) Rui Faria et al. TRENDS IN ECOLOGY & EVOLUTION
- Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data
- (2009) Ryan N. Gutenkunst et al. PLoS Genetics
- adegenet: a R package for the multivariate analysis of genetic markers
- (2008) Thibaut Jombart BIOINFORMATICS
- Informed dispersal, heterogeneity in animal dispersal syndromes and the dynamics of spatially structured populations
- (2008) Jean Clobert et al. ECOLOGY LETTERS
- MATCHING HABITAT CHOICE CAUSES DIRECTED GENE FLOW: A NEGLECTED DIMENSION IN EVOLUTION AND ECOLOGY
- (2008) Pim Edelaar et al. EVOLUTION
- Global patterns in marine dispersal estimates: the influence of geography, taxonomic category and life history
- (2008) I. R Bradbury et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Circumpolar genetic population structure of capelin Mallotus villosus
- (2007) K Præbel et al. MARINE ECOLOGY PROGRESS SERIES
- Adaptation from standing genetic variation
- (2007) R BARRETT et al. TRENDS IN ECOLOGY & EVOLUTION
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