Crossing the Species Barrier: Genomic Hotspots of Introgression between Two Highly Divergent Ciona intestinalis Species

Does hybridization influence speciation?

(2013) N. H. Barton   JOURNAL OF EVOLUTIONARY BIOLOGY

Hybridization and speciation

(2013) R. Abbott et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

The Population Genomics of a Fast Evolver: High Levels of Diversity, Functional Constraint, and Molecular Adaptation in the Tunicate Ciona intestinalis

(2012) Georgia Tsagkogeorga et al.   Genome Biology and Evolution

Differential introgression from a sister species explains highFSToutlier loci within a mussel species

(2012) C. C. Gosset et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Field identification of ‘types’ A and B of the ascidian Ciona intestinalis in a region of sympatry

(2012) Atsuko Sato et al.   MARINE BIOLOGY

Coalescent-Based Analysis Distinguishes between Allo- and Autopolyploid Origin in Shepherd's Purse (Capsella bursa-pastoris)

(2012) K. R. St. Onge et al.   MOLECULAR BIOLOGY AND EVOLUTION

Recent and Ancient Signature of Balancing Selection around the S-Locus in Arabidopsis halleri and A. lyrata

(2012) C. Roux et al.   MOLECULAR BIOLOGY AND EVOLUTION

Resequencing Data Provide No Evidence for a Human Bottleneck in Africa during the Penultimate Glacial Period

(2012) Per Sjödin et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genomics of speciation-with-gene-flow

(2012) Jeffrey L. Feder et al.   TRENDS IN GENETICS

abc: an R package for approximate Bayesian computation (ABC)

(2012) Katalin Csilléry et al.   Methods in Ecology and Evolution

Contrasted Patterns of Molecular Evolution in Dominant and Recessive Self-Incompatibility Haplotypes in Arabidopsis

(2012) Pauline M. Goubet et al.   PLoS Genetics

A Genome-Wide Association Study Identifies Five Loci Influencing Facial Morphology in Europeans

(2012) Fan Liu et al.   PLoS Genetics

Large-Scale Introgression Shapes the Evolution of the Mating-Type Chromosomes of the Filamentous Ascomycete Neurospora tetrasperma

(2012) Yu Sun et al.   PLoS Genetics

Adaptive Introgression across Species Boundaries in Heliconius Butterflies

(2012) Carolina Pardo-Diaz et al.   PLoS Genetics

Adaptive Introgression of Anticoagulant Rodent Poison Resistance by Hybridization between Old World Mice

(2011) Ying Song et al.   CURRENT BIOLOGY

POPULATION GENETICS AND OBJECTIVITY IN SPECIES DIAGNOSIS

(2011) Jody Hey et al.   EVOLUTION

Next-generation sequencing of transcriptomes: a guide to RNA isolation in nonmodel animals

(2011) PHILIPPE GAYRAL et al.   Molecular Ecology Resources

Does Speciation between Arabidopsis halleri and Arabidopsis lyrata Coincide with Major Changes in a Molecular Target of Adaptation?

(2011) Camille Roux et al.   PLoS One

Repeated Adaptive Introgression at a Gene under Multiallelic Balancing Selection

(2011) Vincent Castric et al.   PLoS Genetics

A Molecular Phylogeny of Living Primates

(2011) Polina Perelman et al.   PLoS Genetics

Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0)

(2010) Jean-Marie Cornuet et al.   BMC BIOINFORMATICS

INTROGRESSION DESPITE SUBSTANTIAL DIVERGENCE IN A BROADCAST SPAWNING MARINE INVERTEBRATE

(2010) Marie L. Nydam et al.   EVOLUTION

THE DISTINCTIVE FOOTPRINTS OF LOCAL HITCHHIKING IN A VARIED ENVIRONMENT AND GLOBAL HITCHHIKING IN A SUBDIVIDED POPULATION

(2010) Nicolas Bierne   EVOLUTION

Maintenance of Fungal Pathogen Species That Are Specialized to Different Hosts: Allopatric Divergence and Introgression through Secondary Contact

(2010) P. Gladieux et al.   MOLECULAR BIOLOGY AND EVOLUTION

In defence of model-based inference in phylogeography

(2010) MARK A. BEAUMONT et al.   MOLECULAR ECOLOGY

mlRho - a program for estimating the population mutation and recombination rates from shotgun-sequenced diploid genomes

(2010) BERNHARD HAUBOLD et al.   MOLECULAR ECOLOGY

Invasion genetics of the Ciona intestinalis species complex: from regional endemism to global homogeneity

(2010) AIBIN ZHAN et al.   MOLECULAR ECOLOGY

Polymorphism and divergence within the ascidian genus Ciona

(2010) Marie L. Nydam et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Influence of Bering Strait flow and North Atlantic circulation on glacial sea-level changes

(2010) Aixue Hu et al.   Nature Geoscience

Widespread genomic divergence during sympatric speciation

(2010) A. P. Michel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hybrid Incompatibility "Snowballs" Between Solanum Species

(2010) L. C. Moyle et al.   SCIENCE

Widespread Divergence Between Incipient Anopheles gambiae Species Revealed by Whole Genome Sequences

(2010) M. K. N. Lawniczak et al.   SCIENCE

A Test of the Snowball Theory for the Rate of Evolution of Hybrid Incompatibilities

(2010) D. R. Matute et al.   SCIENCE

Approximate Bayesian Computation (ABC) in practice

(2010) Katalin Csilléry et al.   TRENDS IN ECOLOGY & EVOLUTION

The Role of Hybridization in Plant Speciation

(2009) Pamela S. Soltis et al.   Annual Review of Plant Biology

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

The evolutionarily conserved leprecan gene: Its regulation by Brachyury and its role in the developing Ciona notochord

(2009) Matthew P. Dunn et al.   DEVELOPMENTAL BIOLOGY

Historical Divergence and Gene Flow in the Genus Zea

(2009) J. Ross-Ibarra et al.   GENETICS

The Impact of Sampling Schemes on the Site Frequency Spectrum in Nonequilibrium Subdivided Populations

(2009) T. Stadler et al.   GENETICS

The Flow of Antimicrobial Peptide Genes Through a Genetic Barrier Between Mytilus edulis and M. galloprovincialis

(2009) Eva Boon et al.   JOURNAL OF MOLECULAR EVOLUTION

Natural selection in action during speciation

(2009) S. Via   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Divergent Evolution of Duplicate Genes Leads to Genetic Incompatibilities Within A. thaliana

(2009) D. Bikard et al.   SCIENCE

The Great American Schism: Divergence of Marine Organisms After the Rise of the Central American Isthmus

(2008) H.A. Lessios   Annual Review of Ecology Evolution and Systematics

Inferring population history with DIY ABC: a user-friendly approach to approximate Bayesian computation

(2008) Jean-Marie Cornuet et al.   BIOINFORMATICS

Process of invasiveness among exotic tunicates in Prince Edward Island, Canada

(2008) Aaron Ramsay et al.   BIOLOGICAL INVASIONS

HALDANE'S RULE IN AN AVIAN SYSTEM: USING CLINE THEORY AND DIVERGENCE POPULATION GENETICS TO TEST FOR DIFFERENTIAL INTROGRESSION OF MITOCHONDRIAL, AUTOSOMAL, AND SEX-LINKED LOCI ACROSS THEPASSERINABUNTING HYBRID ZONE

(2008) Matthew D. Carling et al.   EVOLUTION

HYBRID ZONE ORIGINS, SPECIES BOUNDARIES, AND THE EVOLUTION OF WING-PATTERN DIVERSITY IN A POLYTYPIC SPECIES COMPLEX OF NORTH AMERICAN ADMIRAL BUTTERFLIES (NYMPHALIDAE: LIMENITIS)

(2008) Sean P. Mullen et al.   EVOLUTION

A MULTILOCUS TEST OF SIMULTANEOUS DIVERGENCE ACROSS THE ISTHMUS OF PANAMA USING SNAPPING SHRIMP IN THE GENUSALPHEUS

(2008) Carla Hurt et al.   EVOLUTION

Population genomics and speciation

(2008) Roger K. Butlin   GENETICA

Statistical Power Analysis of Neutrality Tests Under Demographic Expansions, Contractions and Bottlenecks With Recombination

(2008) A. Ramirez-Soriano et al.   GENETICS

On the Origin and Spread of the Scab Disease of Apple: Out of Central Asia

(2008) Pierre Gladieux et al.   PLoS One

Patterns of Polymorphism and Demographic History in Natural Populations of Arabidopsis lyrata

(2008) Jeffrey Ross-Ibarra et al.   PLoS One

Mechanism of Self-Sterility in a Hermaphroditic Chordate

(2008) Y. Harada et al.   SCIENCE

Regulatory Genes Control a Key Morphological and Ecological Trait Transferred Between Species

(2008) M. Kim et al.   SCIENCE