Computational principles and practice for decoding immune contexture in the tumor microenvironment
出版年份 2020 全文链接
标题
Computational principles and practice for decoding immune contexture in the tumor microenvironment
作者
关键词
-
出版物
BRIEFINGS IN BIOINFORMATICS
Volume -, Issue -, Pages -
出版商
Oxford University Press (OUP)
发表日期
2020-04-13
DOI
10.1093/bib/bbaa075
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- ImmuCellAI: A Unique Method for Comprehensive T‐Cell Subsets Abundance Prediction and its Application in Cancer Immunotherapy
- (2020) Ya‐Ru Miao et al. Advanced Science
- Identification of tumor immune infiltration-associated lncRNAs for improving prognosis and immunotherapy response of patients with non-small cell lung cancer
- (2020) Jie Sun et al. Journal for ImmunoTherapy of Cancer
- RNA-Seq Signatures Normalized by mRNA Abundance Allow Absolute Deconvolution of Human Immune Cell Types
- (2019) Gianni Monaco et al. Cell Reports
- Determining cell type abundance and expression from bulk tissues with digital cytometry
- (2019) Aaron M. Newman et al. NATURE BIOTECHNOLOGY
- IEDB-AR: immune epitope database—analysis resource in 2019
- (2019) Sandeep Kumar Dhanda et al. NUCLEIC ACIDS RESEARCH
- Molecular and pharmacological modulators of the tumor immune contexture revealed by deconvolution of RNA-seq data
- (2019) Francesca Finotello et al. Genome Medicine
- Tumor Dormancy and Interplay with Hypoxic Tumor Microenvironment
- (2019) Elena Butturini et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Combination Immunotherapy with CAR T Cells and Checkpoint Blockade for the Treatment of Solid Tumors
- (2019) Rachel Grosser et al. CANCER CELL
- Understanding the tumor immune microenvironment (TIME) for effective therapy
- (2018) Mikhail Binnewies et al. NATURE MEDICINE
- ImmPort, toward repurposing of open access immunological assay data for translational and clinical research
- (2018) Sanchita Bhattacharya et al. Scientific Data
- Pan-cancer deconvolution of tumour composition using DNA methylation
- (2018) Ankur Chakravarthy et al. Nature Communications
- The Immune Epitope Database (IEDB): 2018 update
- (2018) Randi Vita et al. NUCLEIC ACIDS RESEARCH
- The 10,000 Immunomes Project: Building a Resource for Human Immunology
- (2018) Kelly A. Zalocusky et al. Cell Reports
- DNA methylation–based immune response signature improves patient diagnosis in multiple cancers
- (2017) Jana Jeschke et al. JOURNAL OF CLINICAL INVESTIGATION
- Exhaustion-associated regulatory regions in CD8+tumor-infiltrating T cells
- (2017) Giuliana P. Mognol et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Simultaneous enumeration of cancer and immune cell types from bulk tumor gene expression data
- (2017) Julien Racle et al. eLife
- Immunotherapy biomarkers 2016: overcoming the barriers
- (2017) James L. Gulley et al. Journal for ImmunoTherapy of Cancer
- Clinical significance of tumor-infiltrating lymphocytes in breast cancer
- (2016) Sasha E. Stanton et al. Journal for ImmunoTherapy of Cancer
- Challenges and opportunities for checkpoint blockade in T-cell lymphoproliferative disorders
- (2016) Tycel Phillips et al. Journal for ImmunoTherapy of Cancer
- B cell regulation of the anti-tumor response and role in carcinogenesis
- (2016) Marc Schwartz et al. Journal for ImmunoTherapy of Cancer
- Robust enumeration of cell subsets from tissue expression profiles
- (2015) Aaron M Newman et al. NATURE METHODS
- Incremental learning for ν-Support Vector Regression
- (2015) Bin Gu et al. NEURAL NETWORKS
- ImmuSort, a database on gene plasticity and electronic sorting for immune cells
- (2015) Pingzhang Wang et al. Scientific Reports
- The Molecular Signatures Database Hallmark Gene Set Collection
- (2015) Arthur Liberzon et al. Cell Systems
- Identification of Reprogrammed Myeloid Cell Transcriptomes in NSCLC
- (2015) Anna Durrans et al. PLoS One
- Overview of Automated Immunohistochemistry
- (2014) Jeffrey W. Prichard ARCHIVES OF PATHOLOGY & LABORATORY MEDICINE
- ImmPort: disseminating data to the public for the future of immunology
- (2014) Sanchita Bhattacharya et al. IMMUNOLOGIC RESEARCH
- ImmuCo: a database of gene co-expression in immune cells
- (2014) Pingzhang Wang et al. NUCLEIC ACIDS RESEARCH
- MMAD: microarray microdissection with analysis of differences is a computational tool for deconvoluting cell type-specific contributions from tissue samples
- (2013) David A. Liebner et al. BIOINFORMATICS
- DeMix: deconvolution for mixed cancer transcriptomes using raw measured data
- (2013) Jaeil Ahn et al. BIOINFORMATICS
- Digital sorting of complex tissues for cell type-specific gene expression profiles
- (2013) Yi Zhong et al. BMC BIOINFORMATICS
- Immunofluorescence Techniques
- (2013) Ian D. Odell et al. JOURNAL OF INVESTIGATIVE DERMATOLOGY
- Microenvironmental regulation of tumor progression and metastasis
- (2013) Daniela F Quail et al. NATURE MEDICINE
- Inferring tumour purity and stromal and immune cell admixture from expression data
- (2013) Kosuke Yoshihara et al. Nature Communications
- Tumor Microenvironment Complexity: Emerging Roles in Cancer Therapy
- (2012) M. A. Swartz et al. CANCER RESEARCH
- FlowRepository: A resource of annotated flow cytometry datasets associated with peer-reviewed publications
- (2012) Josef Spidlen et al. CYTOMETRY PART A
- InnateDB: systems biology of innate immunity and beyond—recent updates and continuing curation
- (2012) Karin Breuer et al. NUCLEIC ACIDS RESEARCH
- Population-specific expression analysis (PSEA) reveals molecular changes in diseased brain
- (2011) Alexandre Kuhn et al. NATURE METHODS
- Introduction to the tumour microenvironment Review Series
- (2009) Jack Lawler JOURNAL OF CELLULAR AND MOLECULAR MEDICINE
- Systematic RNA interference reveals that oncogenic KRAS-driven cancers require TBK1
- (2009) David A. Barbie et al. NATURE
- The Innate Immune Database (IIDB)
- (2008) Martin Korb et al. BMC IMMUNOLOGY
- The Immunological Genome Project: networks of gene expression in immune cells
- (2008) Tracy S P Heng et al. NATURE IMMUNOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now