InnateDB: systems biology of innate immunity and beyond—recent updates and continuing curation

Viral immune modulators perturb the human molecular network by common and unique strategies

(2012) Andreas Pichlmair et al.   NATURE

Protein interaction data curation: the International Molecular Exchange (IMEx) consortium

(2012) Sandra Orchard et al.   NATURE METHODS

An atlas of bovine gene expression reveals novel distinctive tissue characteristics and evidence for improving genome annotation

(2012) Gregory P Harhay et al.   GENOME BIOLOGY

PSICQUIC and PSISCORE: accessing and scoring molecular interactions

(2011) Bruno Aranda et al.   NATURE METHODS

The IntAct molecular interaction database in 2012

(2011) S. Kerrien et al.   NUCLEIC ACIDS RESEARCH

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

Curating the innate immunity interactome

(2010) David J Lynn et al.   BMC Systems Biology

Sepsis Induces Early Alterations in Innate Immunity That Impact Mortality to Secondary Infection

(2010) M. J. Delano et al.   JOURNAL OF IMMUNOLOGY

Characterization of the bovine type I IFN locus: rearrangements, expansions, and novel subfamilies

(2009) Angela M Walker et al.   BMC GENOMICS

Network visualization and analysis of gene expression data using BioLayout Express3D

(2009) Athanasios Theocharidis et al.   Nature Protocols

Enabling a systems biology approach to immunology: focus on innate immunity

(2009) Jennifer L. Gardy et al.   TRENDS IN IMMUNOLOGY

A comprehensive functional analysis of tissue specificity of human gene expression

(2008) Zoltan Dezso et al.   BMC BIOLOGY

InnateDB: facilitating systems-level analyses of the mammalian innate immune response

(2008) David J Lynn et al.   Molecular Systems Biology

Innate immunity and intestinal microbiota in the development of Type 1 diabetes

(2008) Li Wen et al.   NATURE

Unraveling Protein Networks with Power Graph Analysis

(2008) Loïc Royer et al.   PLoS Computational Biology