Zika virus noncoding sfRNAs sequester multiple host-derived RNA-binding proteins and modulate mRNA decay and splicing during infection
出版年份 2019 全文链接
标题
Zika virus noncoding sfRNAs sequester multiple host-derived RNA-binding proteins and modulate mRNA decay and splicing during infection
作者
关键词
-
出版物
JOURNAL OF BIOLOGICAL CHEMISTRY
Volume 294, Issue 44, Pages 16282-16296
出版商
American Society for Biochemistry & Molecular Biology (ASBMB)
发表日期
2019-09-14
DOI
10.1074/jbc.ra119.009129
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Vector-borne transmission and evolution of Zika virus
- (2019) Gladys Gutiérrez-Bugallo et al. Nature Ecology & Evolution
- RNA regulatory processes in RNA virus biology
- (2019) Shaun T. Cross et al. Wiley Interdisciplinary Reviews-RNA
- Quantification of experimentally induced nucleotide conversions in high-throughput sequencing datasets
- (2019) Tobias Neumann et al. BMC BIOINFORMATICS
- Integrative bioinformatics analysis characterizing the role of EDC3 in mRNA decay and its association to intellectual disability
- (2018) Ute Scheller et al. BMC Medical Genomics
- Flaviviruses Produce a Subgenomic Flaviviral RNA That Enhances Mosquito Transmission
- (2018) Shih-Chia Yeh et al. DNA AND CELL BIOLOGY
- Rewiring cellular networks by members of the Flaviviridae family
- (2018) Christopher J. Neufeldt et al. NATURE REVIEWS MICROBIOLOGY
- A folded viral noncoding RNA blocks host cell exoribonucleases through a conformationally dynamic RNA structure
- (2018) Anna-Lena Steckelberg et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Identification and characterization of host proteins bound to dengue virus 3′ UTR reveal an antiviral role for quaking proteins
- (2018) Kuo-Chieh Liao et al. RNA
- Inhibition of SF3B1 by molecules targeting the spliceosome results in massive aberrant exon skipping
- (2018) Gang Wu et al. RNA
- Beet Necrotic Yellow Vein Virus Noncoding RNA Production Depends on a 5′→3′ Xrn Exoribonuclease Activity
- (2018) Alyssa Flobinus et al. Viruses-Basel
- Subgenomic flaviviral RNAs: What do we know after the first decade of research
- (2018) Andrii Slonchak et al. ANTIVIRAL RESEARCH
- Challenges and opportunities in controlling mosquito-borne infections
- (2018) Neil M. Ferguson NATURE
- The emergence of Zika virus and its new clinical syndromes
- (2018) Theodore C. Pierson et al. NATURE
- Advances in Analyzing Virus-Induced Alterations of Host Cell Splicing
- (2018) Usama Ashraf et al. TRENDS IN MICROBIOLOGY
- Fragile X mental retardation protein is a Zika virus restriction factor that is antagonized by subgenomic flaviviral RNA
- (2018) Ruben Soto-Acosta et al. eLife
- RNA Editors, Cofactors, and mRNA Targets: An Overview of the C-to-U RNA Editing Machinery and Its Implication in Human Disease
- (2018) Taga Lerner et al. Genes
- The Role of RNA Editing in Cancer Development and Metabolic Disorders
- (2018) Che-Pei Kung et al. Frontiers in Endocrinology
- From APOBEC to ZAP: Diverse mechanisms used by cellular restriction factors to inhibit virus infections
- (2018) Mahesh Chemudupati et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH
- Identification of phlebovirus and arenavirus RNA sequences that stall and repress the exoribonuclease XRN1
- (2017) Phillida A. Charley et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Metabolic labeling and recovery of nascent RNA to accurately quantify mRNA stability
- (2017) Joseph Russo et al. METHODS
- Codon optimality, bias and usage in translation and mRNA decay
- (2017) Gavin Hanson et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Homology model of the human tRNA splicing ligase RtcB
- (2017) Argha Nandy et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- ZIKV infection effects changes in gene splicing, isoform composition and lncRNA expression in human neural progenitor cells
- (2017) Benxia Hu et al. Virology Journal
- Dengue subgenomic flaviviral RNA disrupts immunity in mosquito salivary glands to increase virus transmission
- (2017) Julien Pompon et al. PLoS Pathogens
- Posttranscriptional control of airway inflammation
- (2017) Wendy Ezegbunam et al. Wiley Interdisciplinary Reviews-RNA
- A Mouse Model of Zika Virus Pathogenesis
- (2016) Helen M. Lazear et al. Cell Host & Microbe
- Noncoding Subgenomic Flavivirus RNA Is Processed by the Mosquito RNA Interference Machinery and Determines West Nile Virus Transmission by Culex pipiens Mosquitoes
- (2016) G. P. Göertz et al. JOURNAL OF VIROLOGY
- Development and Characterization of Recombinant Virus Generated from a New World Zika Virus Infectious Clone
- (2016) James Weger-Lucarelli et al. JOURNAL OF VIROLOGY
- RNA binding to APOBEC deaminases; Not simply a substrate for C to U editing
- (2016) Harold C. Smith RNA Biology
- Global analysis of pre-mRNA subcellular localization following splicing inhibition by spliceostatin A
- (2016) Rei Yoshimoto et al. RNA
- Zika virus produces noncoding RNAs using a multi-pseudoknot structure that confounds a cellular exonuclease
- (2016) B. M. Akiyama et al. SCIENCE
- Arms Race between Enveloped Viruses and the Host ERAD Machinery
- (2016) Dylan Frabutt et al. Viruses-Basel
- A Viral Noncoding RNA Complements a Weakened Viral RNA Silencing Suppressor and Promotes Efficient Systemic Host Infection
- (2016) Alyssa Flobinus et al. Viruses-Basel
- The Dengue Virus NS5 Protein Intrudes in the Cellular Spliceosome and Modulates Splicing
- (2016) Federico A. De Maio et al. PLoS Pathogens
- The double-domain cytidine deaminase APOBEC3G is a cellular site-specific RNA editing enzyme
- (2016) Shraddha Sharma et al. Scientific Reports
- Dengue subgenomic RNA binds TRIM25 to inhibit interferon expression for epidemiological fitness
- (2015) G. Manokaran et al. SCIENCE
- Flavivirus sfRNA suppresses antiviral RNA interference in cultured cells and mosquitoes and directly interacts with the RNAi machinery
- (2015) Stephanie L. Moon et al. VIROLOGY
- APOBEC3A cytidine deaminase induces RNA editing in monocytes and macrophages
- (2015) Shraddha Sharma et al. Nature Communications
- Cancer-Associated SF3B1 Hotspot Mutations Induce Cryptic 3′ Splice Site Selection through Use of a Different Branch Point
- (2015) Rachel B. Darman et al. Cell Reports
- SF3B1 Association with Chromatin Determines Splicing Outcomes
- (2015) Nir Kfir et al. Cell Reports
- XRN1 Stalling in the 5’ UTR of Hepatitis C Virus and Bovine Viral Diarrhea Virus Is Associated with Dysregulated Host mRNA Stability
- (2015) Stephanie L. Moon et al. PLoS Pathogens
- Host APOBEC3G Protein Inhibits HCV Replication through Direct Binding at NS3
- (2015) Yan-Ping Zhu et al. PLoS One
- Flaviviral RNAs: weapons and targets in the war between virus and host
- (2014) Katell Bidet et al. BIOCHEMICAL JOURNAL
- Tn5 transposase and tagmentation procedures for massively scaled sequencing projects
- (2014) Simone Picelli et al. GENOME RESEARCH
- A Synthetic Biology Approach Identifies the Mammalian UPR RNA Ligase RtcB
- (2014) Yanyan Lu et al. MOLECULAR CELL
- The Structural Basis of Pathogenic Subgenomic Flavivirus RNA (sfRNA) Production
- (2014) E. G. Chapman et al. SCIENCE
- DDX6 and its orthologs as modulators of cellular and viral RNA expression
- (2014) Dirk H. Ostareck et al. Wiley Interdisciplinary Reviews-RNA
- RNA structures that resist degradation by Xrn1 produce a pathogenic Dengue virus RNA
- (2014) Erich G Chapman et al. eLife
- Gene Expression Is Circular: Factors for mRNA Degradation Also Foster mRNA Synthesis
- (2013) Gal Haimovich et al. CELL
- Global Analysis of Eukaryotic mRNA Degradation Reveals Xrn1-Dependent Buffering of Transcript Levels
- (2013) Mai Sun et al. MOLECULAR CELL
- West Nile virus infection and immunity
- (2013) Mehul S. Suthar et al. NATURE REVIEWS MICROBIOLOGY
- Barriers to preclinical investigations of anti-dengue immunity and dengue pathogenesis
- (2013) Ashley L. St. John et al. NATURE REVIEWS MICROBIOLOGY
- Cytoplasmic Viruses: Rage against the (Cellular RNA Decay) Machine
- (2013) Stephanie L. Moon et al. PLoS Pathogens
- West Nile Virus Noncoding Subgenomic RNA Contributes to Viral Evasion of the Type I Interferon-Mediated Antiviral Response
- (2012) A. Schuessler et al. JOURNAL OF VIROLOGY
- Noncoding Flavivirus RNA Displays RNA Interference Suppressor Activity in Insect and Mammalian Cells
- (2012) E. Schnettler et al. JOURNAL OF VIROLOGY
- Dectin-1 is an extracellular pathogen sensor for the induction and processing of IL-1β via a noncanonical caspase-8 inflammasome
- (2012) Sonja I Gringhuis et al. NATURE IMMUNOLOGY
- A noncoding RNA produced by arthropod-borne flaviviruses inhibits the cellular exoribonuclease XRN1 and alters host mRNA stability
- (2012) S. L. Moon et al. RNA
- Post-transcriptional spliceosomes are retained in nuclear speckles until splicing completion
- (2012) Cyrille Girard et al. Nature Communications
- Host apolipoprotein b messenger RNA-editing enzyme catalytic polypeptide-like 3G is an innate defensive factor and drug target against hepatitis C virus
- (2011) Zong-Gen Peng et al. HEPATOLOGY
- APOBEC1-Mediated Editing and Attenuation of Herpes Simplex Virus 1 DNA Indicate That Neurons Have an Antiviral Role during Herpes Simplex Encephalitis
- (2011) P. Gee et al. JOURNAL OF VIROLOGY
- Global quantification of mammalian gene expression control
- (2011) Björn Schwanhäusser et al. NATURE
- RNA Structures Required for Production of Subgenomic Flavivirus RNA
- (2010) A. Funk et al. JOURNAL OF VIROLOGY
- An RNA Pseudoknot Is Required for Production of Yellow Fever Virus Subgenomic RNA by the Host Nuclease XRN1
- (2010) P. A. G. C. Silva et al. JOURNAL OF VIROLOGY
- Structure and RNA recognition by the snRNA and snoRNA transport factor PHAX
- (2010) A. Mourao et al. RNA
- Networks controlling mRNA decay in the immune system
- (2010) Johanna Schott et al. Wiley Interdisciplinary Reviews-RNA
- Human APOBEC1 cytidine deaminase edits HBV DNA
- (2009) Minerva Gonzalez et al. Retrovirology
- A Highly Structured, Nuclease-Resistant, Noncoding RNA Produced by Flaviviruses Is Required for Pathogenicity
- (2008) Gorben P. Pijlman et al. Cell Host & Microbe
- A Viral Noncoding RNA Generated by cis-Element-Mediated Protection against 5'->3' RNA Decay Represses both Cap-Independent and Cap-Dependent Translation
- (2008) H.-o. Iwakawa et al. JOURNAL OF VIROLOGY
- Alternative isoform regulation in human tissue transcriptomes
- (2008) Eric T. Wang et al. NATURE
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