A folded viral noncoding RNA blocks host cell exoribonucleases through a conformationally dynamic RNA structure

Beet Necrotic Yellow Vein Virus Noncoding RNA Production Depends on a 5′→3′ Xrn Exoribonuclease Activity

(2018) Alyssa Flobinus et al.   Viruses-Basel

Mechanism and structural diversity of exoribonuclease-resistant RNA structures in flaviviral RNAs

(2018) Andrea MacFadden et al.   Nature Communications

Comparison of preribosomal RNA processing pathways in yeast, plant and human cells - focus on coordinated action of endo- and exoribonucleases

(2017) Rafal Tomecki et al.   FEBS LETTERS

Identification of phlebovirus and arenavirus RNA sequences that stall and repress the exoribonuclease XRN1

(2017) Phillida A. Charley et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Noncoding Subgenomic Flavivirus RNA Is Processed by the Mosquito RNA Interference Machinery and Determines West Nile Virus Transmission by Culex pipiens Mosquitoes

(2016) G. P. Göertz et al.   JOURNAL OF VIROLOGY

Zika virus produces noncoding RNAs using a multi-pseudoknot structure that confounds a cellular exonuclease

(2016) B. M. Akiyama et al.   SCIENCE

A Viral Noncoding RNA Complements a Weakened Viral RNA Silencing Suppressor and Promotes Efficient Systemic Host Infection

(2016) Alyssa Flobinus et al.   Viruses-Basel

New hypotheses derived from the structure of a flaviviral Xrn1-resistant RNA: Conservation, folding, and host adaptation

(2015) Jeffrey S Kieft et al.   RNA Biology

Dengue subgenomic RNA binds TRIM25 to inhibit interferon expression for epidemiological fitness

(2015) G. Manokaran et al.   SCIENCE

Flavivirus sfRNA suppresses antiviral RNA interference in cultured cells and mosquitoes and directly interacts with the RNAi machinery

(2015) Stephanie L. Moon et al.   VIROLOGY

XRN1 Stalling in the 5’ UTR of Hepatitis C Virus and Bovine Viral Diarrhea Virus Is Associated with Dysregulated Host mRNA Stability

(2015) Stephanie L. Moon et al.   PLoS Pathogens

Structural insights into the stabilization of MALAT1 noncoding RNA by a bipartite triple helix

(2014) Jessica A Brown et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The Structural Basis of Pathogenic Subgenomic Flavivirus RNA (sfRNA) Production

(2014) E. G. Chapman et al.   SCIENCE

Noncoding Subgenomic Flavivirus RNA: Multiple Functions in West Nile Virus Pathogenesis and Modulation of Host Responses

(2014) Justin Roby et al.   Viruses-Basel

G3BP1, G3BP2 and CAPRIN1 Are Required for Translation of Interferon Stimulated mRNAs and Are Targeted by a Dengue Virus Non-coding RNA

(2014) Katell Bidet et al.   PLoS Pathogens

Structure and function of pseudoknots involved in gene expression control

(2014) Alla Peselis et al.   Wiley Interdisciplinary Reviews-RNA

RNA structures that resist degradation by Xrn1 produce a pathogenic Dengue virus RNA

(2014) Erich G Chapman et al.   eLife

XRN 5′→3′ exoribonucleases: Structure, mechanisms and functions

(2013) Vinay K. Nagarajan et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Dengue virus subgenomic RNA induces apoptosis through the Bcl-2-mediated PI3k/Akt signaling pathway

(2013) Yi Liu et al.   VIROLOGY

Cytoplasmic Viruses: Rage against the (Cellular RNA Decay) Machine

(2013) Stephanie L. Moon et al.   PLoS Pathogens

Beet necrotic yellow vein virus subgenomic RNA3 is a cleavage product leading to stable non-coding RNA required for long-distance movement

(2012) C. Peltier et al.   JOURNAL OF GENERAL VIROLOGY

West Nile Virus Noncoding Subgenomic RNA Contributes to Viral Evasion of the Type I Interferon-Mediated Antiviral Response

(2012) A. Schuessler et al.   JOURNAL OF VIROLOGY

Noncoding Flavivirus RNA Displays RNA Interference Suppressor Activity in Insect and Mammalian Cells

(2012) E. Schnettler et al.   JOURNAL OF VIROLOGY

A noncoding RNA produced by arthropod-borne flaviviruses inhibits the cellular exoribonuclease XRN1 and alters host mRNA stability

(2012) S. L. Moon et al.   RNA

The 5′ → 3′ exoribonuclease XRN1/Pacman and its functions in cellular processes and development

(2012) Christopher Iain Jones et al.   Wiley Interdisciplinary Reviews-RNA

Coupled 5′ Nucleotide Recognition and Processivity in Xrn1-Mediated mRNA Decay

(2011) Martin Jinek et al.   MOLECULAR CELL

Structural and biochemical studies of the 5′→3′ exoribonuclease Xrn1

(2011) Jeong Ho Chang et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Protein-mediated protection as the predominant mechanism for defining processed mRNA termini in land plant chloroplasts

(2011) Petya Zhelyazkova et al.   NUCLEIC ACIDS RESEARCH

Mechanism of RNA stabilization and translational activation by a pentatricopeptide repeat protein

(2010) J. Prikryl et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Poly(A) Tail Recognition by a Viral RNA Element Through Assembly of a Triple Helix

(2010) R. M. Mitton-Fry et al.   SCIENCE

Site-specific binding of a PPR protein defines and stabilizes 5′ and 3′ mRNA termini in chloroplasts

(2009) Jeannette Pfalz et al.   EMBO JOURNAL

Beet soil-borne mosaic virus RNA-3 is replicated and encapsidated in the presence of BNYVV RNA-1 and -2 and allows long distance movement in Beta macrocarpa

(2009) Claudio Ratti et al.   VIROLOGY

A Highly Structured, Nuclease-Resistant, Noncoding RNA Produced by Flaviviruses Is Required for Pathogenicity

(2008) Gorben P. Pijlman et al.   Cell Host & Microbe

A Viral Noncoding RNA Generated by cis-Element-Mediated Protection against 5'->3' RNA Decay Represses both Cap-Independent and Cap-Dependent Translation

(2008) H.-o. Iwakawa et al.   JOURNAL OF VIROLOGY