The GMC superfamily of oxidoreductases revisited: analysis and evolution of fungal GMC oxidoreductases
出版年份 2019 全文链接
标题
The GMC superfamily of oxidoreductases revisited: analysis and evolution of fungal GMC oxidoreductases
作者
关键词
-
出版物
Biotechnology for Biofuels
Volume 12, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2019-05-10
DOI
10.1186/s13068-019-1457-0
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Protein engineers turned evolutionists—the quest for the optimal starting point
- (2019) Devin L Trudeau et al. CURRENT OPINION IN BIOTECHNOLOGY
- Multiplicity of enzymatic functions in the CAZy AA3 family
- (2018) Leander Sützl et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- On the origin of vanillyl alcohol oxidases
- (2018) Gudrun Gygli et al. FUNGAL GENETICS AND BIOLOGY
- HMMER web server: 2018 update
- (2018) Simon C Potter et al. NUCLEIC ACIDS RESEARCH
- Oxidoreductases and Reactive Oxygen Species in Conversion of Lignocellulosic Biomass
- (2018) Bastien Bissaro et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- TimeTree: A Resource for Timelines, Timetrees, and Divergence Times
- (2017) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- SMS: Smart Model Selection in PhyML
- (2017) Vincent Lefort et al. MOLECULAR BIOLOGY AND EVOLUTION
- Evolution and genome architecture in fungal plant pathogens
- (2017) Mareike Möller et al. NATURE REVIEWS MICROBIOLOGY
- Evolutionary and molecular foundations of multiple contemporary functions of the nitroreductase superfamily
- (2017) Eyal Akiva et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genomic Data Quality Impacts Automated Detection of Lateral Gene Transfer in Fungi
- (2017) Pierre-Yves Dupont et al. G3-Genes Genomes Genetics
- Activities of Secreted Aryl Alcohol Quinone Oxidoreductases from Pycnoporus cinnabarinus Provide Insights into Fungal Degradation of Plant Biomass
- (2016) Yann Mathieu et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- An aryl-alcohol oxidase of Pleurotus sapidus: heterologous expression, characterization, and application in a 2-enzyme system
- (2016) Ilya Galperin et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Characterization of a bacterial pyranose 2-oxidase from Arthrobacter siccitolerans
- (2016) Sónia Mendes et al. JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Transcription analysis of pyranose dehydrogenase from the basidiomycete Agaricus bisporus and characterization of the recombinantly expressed enzyme
- (2016) Christoph Gonaus et al. PROTEIN EXPRESSION AND PURIFICATION
- Identification of New Fungal Peroxisomal Matrix Proteins and Revision of the PTS1 Consensus
- (2016) Christopher Nötzel et al. TRAFFIC
- Crystal Structure of Alcohol Oxidase from Pichia pastoris
- (2016) Christian Koch et al. PLoS One
- Enzyme Function Initiative-Enzyme Similarity Tool (EFI-EST): A web tool for generating protein sequence similarity networks
- (2015) John A. Gerlt et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- Reaction of pyranose dehydrogenase fromAgaricus meleagriswith its carbohydrate substrates
- (2015) Michael M.H. Graf et al. FEBS Journal
- Aromatic stacking interactions govern catalysis in aryl-alcohol oxidase
- (2015) Patricia Ferreira et al. FEBS Journal
- Inter-domain electron transfer in cellobiose dehydrogenase: modulation by pH and divalent cations
- (2015) Daniel Kracher et al. FEBS Journal
- Comparative Genomics of Early-Diverging Mushroom-Forming Fungi Provides Insights into the Origins of Lignocellulose Decay Capabilities
- (2015) László G. Nagy et al. MOLECULAR BIOLOGY AND EVOLUTION
- A survey of genes encoding H2O2-producing GMC oxidoreductases in 10 Polyporales genomes
- (2015) P. Ferreira et al. MYCOLOGIA
- Structural basis for cellobiose dehydrogenase action during oxidative cellulose degradation
- (2015) Tien-Chye Tan et al. Nature Communications
- Structural analysis of fungus-derived FAD glucose dehydrogenase
- (2015) Hiromi Yoshida et al. Scientific Reports
- A novel glucose dehydrogenase from the white-rot fungus Pycnoporus cinnabarinus: production in Aspergillus niger and physicochemical characterization of the recombinant enzyme
- (2014) François Piumi et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- An alcohol oxidase of Phanerochaete chrysosporium with a distinct glycerol oxidase activity
- (2014) Diana Linke et al. ENZYME AND MICROBIAL TECHNOLOGY
- New Insights about Enzyme Evolution from Large Scale Studies of Sequence and Structure Relationships
- (2014) Shoshana D. Brown et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Molecular Characterization and Expression of a Novel Alcohol Oxidase from Aspergillus terreus MTCC6324
- (2014) Mitun Chakraborty et al. PLoS One
- The Inference of Gene Trees with Species Trees
- (2014) Gergely J. Szöllősi et al. SYSTEMATIC BIOLOGY
- Deletion of glucose oxidase changes the pattern of organic acid production in Aspergillus carbonarius
- (2014) Lei Yang et al. AMB Express
- Cellobiose dehydrogenase modified electrodes: advances by materials science and biochemical engineering
- (2013) Roland Ludwig et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes
- (2013) Anthony Levasseur et al. Biotechnology for Biofuels
- The substrate oxidation mechanism of pyranose 2-oxidase and other related enzymes in the glucose-methanol-choline superfamily
- (2013) Thanyaporn Wongnate et al. FEBS Journal
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- The 1.6 Å Crystal Structure of Pyranose Dehydrogenase from Agaricus meleagris Rationalizes Substrate Specificity and Reveals a Flavin Intermediate
- (2013) Tien Chye Tan et al. PLoS One
- Crystal structures of Phanerochaete chrysosporium pyranose 2-oxidase suggest that the N-terminus acts as a propeptide that assists in homotetramer assembly
- (2013) Noor Hassan et al. FEBS Open Bio
- Carbohydrate–Aromatic Interactions
- (2012) Juan Luis Asensio et al. ACCOUNTS OF CHEMICAL RESEARCH
- Characterization of the Two Neurospora crassa Cellobiose Dehydrogenases and Their Connection to Oxidative Cellulose Degradation
- (2012) Christoph Sygmund et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Fungal aryl-alcohol oxidase: a peroxide-producing flavoenzyme involved in lignin degradation
- (2012) Aitor Hernández-Ortega et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- A potential role for an extracellular methanol oxidase secreted by Moniliophthora perniciosa in Witches’ broom disease in cacao
- (2012) Bruno V. de Oliveira et al. FUNGAL GENETICS AND BIOLOGY
- Catalytic Properties and Classification of Cellobiose Dehydrogenases from Ascomycetes
- (2011) Wolfgang Harreither et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Heterologous expression and biochemical characterization of novel pyranose 2-oxidases from the ascomycetes Aspergillus nidulans and Aspergillus oryzae
- (2011) Ines Pisanelli et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- ProtTest 3: fast selection of best-fit models of protein evolution
- (2011) Diego Darriba et al. BIOINFORMATICS
- High-level expression of the Penicillium notatum glucose oxidase gene in Pichia pastoris using codon optimization
- (2011) Zhaowei Gao et al. BIOTECHNOLOGY LETTERS
- Screening of Aspergillus-derived FAD-glucose dehydrogenases from fungal genome database
- (2011) Kazushige Mori et al. BIOTECHNOLOGY LETTERS
- Inference of Functional Properties from Large-scale Analysis of Enzyme Superfamilies
- (2011) Shoshana D. Brown et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Genome-Based Deletion Analysis Reveals the Prenyl Xanthone Biosynthesis Pathway inAspergillus nidulans
- (2011) James F. Sanchez et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Heterologous expression of Pycnoporus cinnabarinus cellobiose dehydrogenase in Pichia pastoris and involvement in saccharification processes
- (2011) Mathieu Bey et al. Microbial Cell Factories
- Reduction of quinones and phenoxy radicals by extracellular glucose dehydrogenase from Glomerella cingulata suggests a role in plant pathogenicity
- (2011) C. Sygmund et al. MICROBIOLOGY-SGM
- Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
- (2011) F. Sievers et al. Molecular Systems Biology
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- Novel structural features in the GMC family of oxidoreductases revealed by the crystal structure of fungal aryl-alcohol oxidase
- (2009) Israel S. Fernández et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Cellobiose Dehydrogenase from the Ligninolytic Basidiomycete Ceriporiopsis subvermispora
- (2009) W. Harreither et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Cloning and Heterologous Expression of Glucose Oxidase Gene from Aspergillus niger Z-25 in Pichia pastoris
- (2009) Yao Guo et al. APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY
- Substrate Binding in the FAD-Dependent Hydroxynitrile Lyase from Almond Provides Insight into the Mechanism of Cyanohydrin Formation and Explains the Absence of Dehydrogenation Activity†,‡
- (2009) Ingrid Dreveny et al. BIOCHEMISTRY
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
- (2009) S. Capella-Gutierrez et al. BIOINFORMATICS
- Jalview Version 2--a multiple sequence alignment editor and analysis workbench
- (2009) A. M. Waterhouse et al. BIOINFORMATICS
- What’s in a covalent bond?
- (2009) Dominic P. H. M. Heuts et al. FEBS Journal
- Pyranose 2-oxidase from Phanerochaete chrysosporium—Expression in E. coli and biochemical characterization
- (2009) Ines Pisanelli et al. JOURNAL OF BIOTECHNOLOGY
- FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
- (2009) M. N. Price et al. MOLECULAR BIOLOGY AND EVOLUTION
- Using Sequence Similarity Networks for Visualization of Relationships Across Diverse Protein Superfamilies
- (2009) Holly J. Atkinson et al. PLoS One
- Glucose oxidase: natural occurrence, function, properties and industrial applications
- (2008) Chun Ming Wong et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- An Improved General Amino Acid Replacement Matrix
- (2008) S. Q. Le et al. MOLECULAR BIOLOGY AND EVOLUTION
- Cellobiose dehydrogenase production by the mycelial culture of the mushroom Termitomyces clypeatus
- (2008) Tanima Saha et al. PROCESS BIOCHEMISTRY
- Cloning, sequence analysis and heterologous expression in Pichia pastoris of a gene encoding a thermostable cellobiose dehydrogenase from Myriococcum thermophilum
- (2008) Marcel Zámocký et al. PROTEIN EXPRESSION AND PURIFICATION
- Characterization of pyranose dehydrogenase from Agaricus meleagris and its application in the C-2 specific conversion of d-galactose
- (2007) Christoph Sygmund et al. JOURNAL OF BIOTECHNOLOGY
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