标题
Evolution and genome architecture in fungal plant pathogens
作者
关键词
-
出版物
NATURE REVIEWS MICROBIOLOGY
Volume 15, Issue 12, Pages 756-771
出版商
Springer Nature
发表日期
2017-08-07
DOI
10.1038/nrmicro.2017.76
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Widespread selective sweeps throughout the genome of model plant pathogenic fungi and identification of effector candidates
- (2017) H. Badouin et al. MOLECULAR ECOLOGY
- The escalatory Red Queen: Population extinction and replacement following arms race dynamics in poplar rust
- (2017) Antoine Persoons et al. MOLECULAR ECOLOGY
- Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae
- (2016) M. Tofazzal Islam et al. BMC BIOLOGY
- Comparative genomics and prediction of conditionally dispensable sequences in legume–infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors
- (2016) Angela H. Williams et al. BMC GENOMICS
- Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen
- (2016) Adriaan Vanheule et al. BMC GENOMICS
- Knock-down of the methyltransferase Kmt6 relieves H3K27me3 and results in induction of cryptic and otherwise silent secondary metabolite gene clusters in Fusarium fujikuroi
- (2016) Lena Studt et al. ENVIRONMENTAL MICROBIOLOGY
- Comparative “Omics” of theFusarium fujikuroiSpecies Complex Highlights Differences in Genetic Potential and Metabolite Synthesis
- (2016) Eva-Maria Niehaus et al. Genome Biology and Evolution
- A Tale of Genome Compartmentalization: The Evolution of Virulence Clusters in Smut Fungi
- (2016) Julien Y. Dutheil et al. Genome Biology and Evolution
- Transposons passively and actively contribute to evolution of the two-speed genome of a fungal pathogen
- (2016) Luigi Faino et al. GENOME RESEARCH
- Hybridization of powdery mildew strains gives rise to pathogens on novel agricultural crop species
- (2016) Fabrizio Menardo et al. NATURE GENETICS
- Rapid emergence of pathogens in agro-ecosystems: global threats to agricultural sustainability and food security
- (2016) Bruce A. McDonald et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The Role of Hybridization in the Evolution and Emergence of New Fungal Plant Pathogens
- (2016) Eva H. Stukenbrock PHYTOPATHOLOGY
- The Evolution of Orphan Regions in Genomes of a Fungal Pathogen of Wheat
- (2016) Clémence Plissonneau et al. mBio
- Comparative Genomics of the Sigatoka Disease Complex on Banana Suggests a Link between Parallel Evolutionary Changes in Pseudocercospora fijiensis and Pseudocercospora eumusae and Increased Virulence on the Banana Host
- (2016) Ti-Cheng Chang et al. PLoS Genetics
- Transcription Factors Encoded on Core and Accessory Chromosomes of Fusarium oxysporum Induce Expression of Effector Genes
- (2016) H. Charlotte van der Does et al. PLoS Genetics
- Fungal Effectors and Plant Susceptibility
- (2015) Libera Lo Presti et al. Annual Review of Plant Biology
- Genome-wide analysis of Fusarium graminearum field populations reveals hotspots of recombination
- (2015) Firas Talas et al. BMC GENOMICS
- Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus
- (2015) Michael H Perlin et al. BMC GENOMICS
- The two-speed genomes of filamentous pathogens: waltz with plants
- (2015) Suomeng Dong et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- The Impact of Recombination Hotspots on Genome Evolution of a Fungal Plant Pathogen
- (2015) D. Croll et al. GENETICS
- Chaos of Rearrangements in the Mating-Type Chromosomes of the Anther-Smut Fungus Microbotryum lychnidis-dioicae
- (2015) Hélène Badouin et al. GENETICS
- Genome Sequencing of Multiple Isolates Highlights Subtelomeric Genomic Diversity withinFusarium fujikuroi
- (2015) Matteo Chiara et al. Genome Biology and Evolution
- Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes
- (2015) Klaas Schotanus et al. Epigenetics & Chromatin
- RNA-seq-Based Gene Annotation and Comparative Genomics of Four Fungal Grass Pathogens in the Genus Zymoseptoria Identify Novel Orphan Genes and Species-Specific Invasions of Transposable Elements
- (2015) Jonathan Grandaubert et al. G3-Genes Genomes Genetics
- Chaos of Rearrangements in the Mating-Type Chromosomes of the Anther-Smut Fungus Microbotryum lychnidis-dioicae
- (2015) Hélène Badouin et al. GENETICS
- Vegetative Hyphal Fusion and Subsequent Nuclear Behavior in Epichloë Grass Endophytes
- (2015) Jun-ya Shoji et al. PLoS One
- Sex or no sex: Evolutionary adaptation occurs regardless
- (2014) Michael F. Seidl et al. BIOESSAYS
- Transposable element-assisted evolution and adaptation to host plant within the Leptosphaeria maculans-Leptosphaeria biglobosa species complex of fungal pathogens
- (2014) Jonathan Grandaubert et al. BMC GENOMICS
- The Architecture and Evolution of Cancer Neochromosomes
- (2014) Dale W. Garsed et al. CANCER CELL
- Variability of chromosome structure in pathogenic fungi—of ‘ends and odds’
- (2014) Jonathan M Galazka et al. CURRENT OPINION IN MICROBIOLOGY
- Expression Profiling of the Wheat Pathogen Zymoseptoria tritici Reveals Genomic Patterns of Transcription and Host-Specific Regulatory Programs
- (2014) Ronny Kellner et al. Genome Biology and Evolution
- Degeneration of the Nonrecombining Regions in the Mating-Type Chromosomes of the Anther-Smut Fungi
- (2014) Eric Fontanillas et al. MOLECULAR BIOLOGY AND EVOLUTION
- Recombination between Clonal Lineages of the Asexual Fungus Verticillium dahliae Detected by Genotyping by Sequencing
- (2014) Michael G. Milgroom et al. PLoS One
- Maintenance of Sex-Related Genes and the Co-Occurrence of Both Mating Types in Verticillium dahliae
- (2014) Dylan P. G. Short et al. PLoS One
- Host ecotype generates evolutionary and epidemiological divergence across a pathogen metapopulation
- (2014) A.-L. Laine et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Direct recognition of homology between double helices of DNA in Neurospora crassa
- (2014) Eugene Gladyshev et al. Nature Communications
- Epigenetic Control of Effector Gene Expression in the Plant Pathogenic Fungus Leptosphaeria maculans
- (2014) Jessica L. Soyer et al. PLoS Genetics
- Origin, Migration Routes and Worldwide Population Genetic Structure of the Wheat Yellow Rust Pathogen Puccinia striiformis f.sp. tritici
- (2014) Sajid Ali et al. PLoS Pathogens
- Evolution and biology of supernumerary B chromosomes
- (2013) Andreas Houben et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Extensive chromosomal reshuffling drives evolution of virulence in an asexual pathogen
- (2013) R. de Jonge et al. GENOME RESEARCH
- Plant Expansins in Bacteria and Fungi: Evolution by Horizontal Gene Transfer and Independent Domain Fusion
- (2013) Nikolas Nikolaidis et al. MOLECULAR BIOLOGY AND EVOLUTION
- The causes and consequences of genetic heterogeneity in cancer evolution
- (2013) Rebecca A. Burrell et al. NATURE
- The wheat powdery mildew genome shows the unique evolution of an obligate biotroph
- (2013) Thomas Wicker et al. NATURE GENETICS
- Evolution, selection and isolation: a genomic view of speciation in fungal plant pathogens
- (2013) Eva Holtgrewe Stukenbrock NEW PHYTOLOGIST
- Mosaic genome structure of the barley powdery mildew pathogen and conservation of transcriptional programs in divergent hosts
- (2013) S. Hacquard et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Fungal Small RNAs Suppress Plant Immunity by Hijacking Host RNA Interference Pathways
- (2013) Arne Weiberg et al. SCIENCE
- Unisexual and Heterosexual Meiotic Reproduction Generate Aneuploidy and Phenotypic Diversity De Novo in the Yeast Cryptococcus neoformans
- (2013) Min Ni et al. PLOS BIOLOGY
- The Fusarium graminearum Histone H3 K27 Methyltransferase KMT6 Regulates Development and Expression of Secondary Metabolite Gene Clusters
- (2013) Lanelle R. Connolly et al. PLoS Genetics
- Breakage-fusion-bridge Cycles and Large Insertions Contribute to the Rapid Evolution of Accessory Chromosomes in a Fungal Pathogen
- (2013) Daniel Croll et al. PLoS Genetics
- Rapid genetic change underpins antagonistic coevolution in a natural host-pathogen metapopulation
- (2012) Peter H. Thrall et al. ECOLOGY LETTERS
- Sex at the origin: an Asian population of the rice blast fungusMagnaporthe oryzaereproduces sexually
- (2012) DOUNIA SALEH et al. MOLECULAR ECOLOGY
- Emerging fungal threats to animal, plant and ecosystem health
- (2012) Matthew C. Fisher et al. NATURE
- Genome Comparison of Barley and Maize Smut Fungi Reveals Targeted Loss of RNA Silencing Components and Species-Specific Presence of Transposable Elements
- (2012) J. D. Laurie et al. PLANT CELL
- Arms race co-evolution ofMagnaporthe oryzae AVR-Pikand ricePikgenes driven by their physical interactions
- (2012) Hiroyuki Kanzaki et al. PLANT JOURNAL
- Fusion of two divergent fungal individuals led to the recent emergence of a unique widespread pathogen species
- (2012) E. H. Stukenbrock et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Tomato immune receptor Ve1 recognizes effector of multiple fungal pathogens uncovered by genome and RNA sequencing
- (2012) R. de Jonge et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Balancing Selection at the Tomato RCR3 Guardee Gene Family Maintains Variation in Strength of Pathogen Defense
- (2012) Anja C. Hörger et al. PLoS Genetics
- Comparative Pathogenomics Reveals Horizontally Acquired Novel Virulence Genes in Fungi Infecting Cereal Hosts
- (2012) Donald M. Gardiner et al. PLoS Pathogens
- Genome Structure and Reproductive Behaviour Influence the Evolutionary Potential of a Fungal Phytopathogen
- (2012) Guillaume Daverdin et al. PLoS Pathogens
- Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi
- (2012) Robin A. Ohm et al. PLoS Pathogens
- RNA-Seq methods for imperfect samples: development, evaluation and applications
- (2012) GENOME BIOLOGY
- Plant-Parasite Coevolution: Bridging the Gap between Genetics and Ecology
- (2011) James K. M. Brown et al. Annual Review of Phytopathology
- RNA Interference in Fungi: Pathways, Functions, and Applications
- (2011) Yunkun Dang et al. EUKARYOTIC CELL
- The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species
- (2011) E. H. Stukenbrock et al. GENOME RESEARCH
- Evidence of the accumulation of allele-specific non-synonymous substitutions in the young region of recombination suppression within the mating-type chromosomes of Neurospora tetrasperma
- (2011) C A Whittle et al. HEREDITY
- The genetic structure of the plant pathogenic fungus Melampsora larici-populina on its wild host is extensively impacted by host domestication
- (2011) C. XHAARD et al. MOLECULAR ECOLOGY
- Metabolic priming by a secreted fungal effector
- (2011) Armin Djamei et al. NATURE
- Whole-genome sequencing of multiple Arabidopsis thaliana populations
- (2011) Jun Cao et al. NATURE GENETICS
- Dynamic interactions between transposable elements and their hosts
- (2011) Henry L. Levin et al. NATURE REVIEWS GENETICS
- The Ascomycete Verticillium longisporum Is a Hybrid and a Plant Pathogen with an Expanded Host Range
- (2011) Patrik Inderbitzin et al. PLoS One
- Obligate biotrophy features unraveled by the genomic analysis of rust fungi
- (2011) S. Duplessis et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage
- (2011) R. A. Farrer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations
- (2011) Thierry Rouxel et al. Nature Communications
- Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
- (2011) Stephen B. Goodwin et al. PLoS Genetics
- Multiple Translocation of the AVR-Pita Effector Gene among Chromosomes of the Rice Blast Fungus Magnaporthe oryzae and Related Species
- (2011) Izumi Chuma et al. PLoS Pathogens
- Genomic Plasticity of the Human Fungal Pathogen Candida albicans
- (2010) Anna Selmecki et al. EUKARYOTIC CELL
- Reduction in the sex ability of worldwide clonal populations of Puccinia striiformis f.sp. tritici
- (2010) Sajid Ali et al. FUNGAL GENETICS AND BIOLOGY
- Accidental Amplification and Inactivation of a Methyltransferase Gene Eliminates Cytosine Methylation in Mycosphaerella graminicola
- (2010) Braham Dhillon et al. GENETICS
- Genetic discontinuities and disequilibria in recently established populations of the plant pathogenic fungus Mycosphaerella fijiensis
- (2010) F. HALKETT et al. MOLECULAR ECOLOGY
- Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
- (2010) Li-Jun Ma et al. NATURE
- Epidermis: the formation and functions of a fundamental plant tissue
- (2010) Marie Javelle et al. NEW PHYTOLOGIST
- Century-Old Mystery of Puccinia striiformis Life History Solved with the Identification of Berberis as an Alternate Host
- (2010) Yue Jin et al. PHYTOPATHOLOGY
- A unique wheat disease resistance-like gene governs effector-triggered susceptibility to necrotrophic pathogens
- (2010) J. D. Faris et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Pathogenicity Determinants in Smut Fungi Revealed by Genome Comparison
- (2010) J. Schirawski et al. SCIENCE
- Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism
- (2010) P. D. Spanu et al. SCIENCE
- Genome-Wide Evolutionary Analysis of Eukaryotic DNA Methylation
- (2010) A. Zemach et al. SCIENCE
- Whole-Genome and Chromosome Evolution Associated with Host Adaptation and Speciation of the Wheat Pathogen Mycosphaerella graminicola
- (2010) Eva H. Stukenbrock et al. PLoS Genetics
- Diversity and Evolution of Effector Loci in Natural Populations of the Plant Pathogen Melampsora lini
- (2009) L. G. Barrett et al. MOLECULAR BIOLOGY AND EVOLUTION
- Phylogenomic Analysis Demonstrates a Pattern of Rare and Ancient Horizontal Gene Transfer between Plants and Fungi
- (2009) T. A. Richards et al. PLANT CELL
- Rapid emergence of hybrids between the two subspecies ofOphiostoma novo-ulmiwith a high level of pathogenic fitness
- (2009) C. M. Brasier et al. PLANT PATHOLOGY
- Meiosis Drives Extraordinary Genome Plasticity in the Haploid Fungal Plant Pathogen Mycosphaerella graminicola
- (2009) Alexander H. J. Wittenberg et al. PLoS One
- The Genome of Nectria haematococca: Contribution of Supernumerary Chromosomes to Gene Expansion
- (2009) Jeffrey J. Coleman et al. PLoS Genetics
- Host-specific toxins: effectors of necrotrophic pathogenicity
- (2008) Timothy L. Friesen et al. CELLULAR MICROBIOLOGY
- EVOLUTIONARY SIGNIFICANCE OF IMBALANCED NUCLEAR RATIOS WITHIN HETEROKARYONS OF THE BASIDIOMYCETE FUNGUSHETEROBASIDION PARVIPORUM
- (2008) Timothy Y. James et al. EVOLUTION
- Development of microsatellite markers and construction of genetic map in rice blast pathogen Magnaporthe grisea
- (2008) Yan Zheng et al. FUNGAL GENETICS AND BIOLOGY
- Ustilago maydis populations tracked maize through domestication and cultivation in the Americas
- (2008) A. B Munkacsi et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started