Biotechnological and Digital Revolution for Climate-Smart Plant Breeding

Can genomics deliver climate-change ready crops?

(2018) Rajeev K Varshney et al.   CURRENT OPINION IN PLANT BIOLOGY

Mutation in barley ERA1 ( Enhanced Response to ABA1 ) gene confers better photosynthesis efficiency in response to drought as revealed by transcriptomic and physiological analysis

(2018) Agata Daszkowska-Golec et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Genetic analysis of heading date in winter and spring wheat

(2018) Mao Huang et al.   EUPHYTICA

Interactive effects of high temperature and drought stress during stem elongation, anthesis and early grain filling on the yield formation and photosynthesis of winter wheat

(2018) Marcela Hlaváčová et al.   FIELD CROPS RESEARCH

Whole-genome prediction of reaction norms to environmental stress in bread wheat ( Triticum aestivum L.) by genomic random regression

(2018) Delphine Ly et al.   FIELD CROPS RESEARCH

Genome editing in potato via CRISPR-Cas9 ribonucleoprotein delivery

(2018) Mariette Andersson et al.   PHYSIOLOGIA PLANTARUM

Adapting legume crops to climate change using genomic approaches

(2018) Mahsa Mousavi-Derazmahalleh et al.   PLANT CELL AND ENVIRONMENT

QTL mapping of flag leaf-related traits in wheat (Triticum aestivum L.)

(2018) Kaiye Liu et al.   THEORETICAL AND APPLIED GENETICS

Genome Editing: Targeting Susceptibility Genes for Plant Disease Resistance

(2018) Syed Shan-e-Ali Zaidi et al.   TRENDS IN BIOTECHNOLOGY

The CRISPR tool kit for genome editing and beyond

(2018) Mazhar Adli   Nature Communications

The role of FLOWERING LOCUS C in vernalization of Brassica: the importance of vernalization research in the face of climate change

(2018) Daniel J. Shea et al.   Crop & Pasture Science

Phenotypic plasticity vs. local adaptation in quantitative traits differences of Stipa grandis in semi-arid steppe, China

(2018) Shao-bo Gao et al.   Scientific Reports

Combining High-Throughput Phenotyping and Genomic Information to Increase Prediction and Selection Accuracy in Wheat Breeding

(2018) Jared Crain et al.   Plant Genome

Climate adaptation in a minor crop species: is the cocoa breeding network prepared for climate change?

(2018) Aidan D. Farrell et al.   Agroecology and Sustainable Food Systems

Investigating Drought Tolerance in Chickpea Using Genome-Wide Association Mapping and Genomic Selection Based on Whole-Genome Resequencing Data

(2018) Yongle Li et al.   Frontiers in Plant Science

Prioritization of Candidate Genes in QTL Regions for Physiological and Biochemical Traits Underlying Drought Response in Barley (Hordeum vulgare L.)

(2018) Kornelia Gudys et al.   Frontiers in Plant Science

Evaluation of the Potential for Genomic Selection to Improve Spring Wheat Resistance to Fusarium Head Blight in the Pacific Northwest

(2018) Haixiao Dong et al.   Frontiers in Plant Science

CRISPR plants now subject to tough GM laws in European Union

(2018) Ewen Callaway   NATURE

European politicians must put greater trust in plant scientists

(2018) Josep M. Casacuberta et al.   NATURE

Root length and root lipid composition contribute to drought tolerance of winter and spring wheat

(2018) M. Djanaguiraman et al.   PLANT AND SOIL

High density genetic mapping of Fusarium head blight resistance QTL in tetraploid wheat

(2018) Ehsan Sari et al.   PLoS One

Genotyping-by-sequencing highlights patterns of genetic structure and domestication in artichoke and cardoon

(2018) Stefano Pavan et al.   PLoS One

GBS-derived SNP catalogue unveiled wide genetic variability and geographical relationships of Italian olive cultivars

(2018) Nunzio D’Agostino et al.   Scientific Reports

Heat in Wheat: Exploit Reverse Genetic Techniques to Discover New Alleles Within the Triticum durum sHsp26 Family

(2018) Alessia Comastri et al.   Frontiers in Plant Science

Training: Plug gap in essential bioinformatics skills

(2017) Michelle D. Brazas et al.   NATURE

Plant adaptations to the combination of drought and high temperatures

(2017) Sara I. Zandalinas et al.   PHYSIOLOGIA PLANTARUM

High-resolution mapping of the pericentromeric region on wheat chromosome arm 5AS harbouring the Fusarium head blight resistance QTLQfhs.ifa-5A

(2017) Maria Buerstmayr et al.   PLANT BIOTECHNOLOGY JOURNAL

CRISPR/Cas9 and TALENs generate heritable mutations for genes involved in small RNA processing of Glycine max and Medicago truncatula

(2017) Shaun J. Curtin et al.   PLANT BIOTECHNOLOGY JOURNAL

Growth response of 98 barley (Hordeum vulgare L.) genotypes to elevated CO2 and identification of related quantitative trait loci using genome-wide association studies

(2017) Esther Mitterbauer et al.   PLANT BREEDING

Temperature increase reduces global yields of major crops in four independent estimates

(2017) Chuang Zhao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Selection in Plant Breeding: Methods, Models, and Perspectives

(2017) José Crossa et al.   TRENDS IN PLANT SCIENCE

A Distinct Genetic Cluster in Cultivated Chickpea as Revealed by Genome-wide Marker Discovery and Genotyping

(2017) Stefano Pavan et al.   Plant Genome

Genome-Wide Association Study of Developing Leaves’ Heat Tolerance during Vegetative Growth Stages in a Sorghum Association Panel

(2017) Junping Chen et al.   Plant Genome

Genetic Transformation and Genomic Resources for Next-Generation Precise Genome Engineering in Vegetable Crops

(2017) Teodoro Cardi et al.   Frontiers in Plant Science

Gene Editing and Crop Improvement Using CRISPR-Cas9 System

(2017) Leena Arora et al.   Frontiers in Plant Science

QTL Analysis for Drought Tolerance in Wheat: Present Status and Future Possibilities

(2017) Pushpendra Gupta et al.   Agronomy-Basel

Virus-induced down-regulation of GmERA1A and GmERA1B genes enhances the stomatal response to abscisic acid and drought resistance in soybean

(2017) Takuya Ogata et al.   PLoS One

Rapid generation of a transgene-free powdery mildew resistant tomato by genome deletion

(2017) Vladimir Nekrasov et al.   Scientific Reports

Liquid-phase sequence capture and targeted re-sequencing revealed novel polymorphisms in tomato genes belonging to the MEP carotenoid pathway

(2017) Irma Terracciano et al.   Scientific Reports

Genome-wide SNP discovery and population structure analysis in pepper (Capsicum annuum) using genotyping by sequencing

(2016) F. Taranto et al.   BMC GENOMICS

Drought stress and carbon assimilation in a warming climate: Reversible and irreversible impacts

(2016) Urs Feller   JOURNAL OF PLANT PHYSIOLOGY

Cisgenesis and genome editing: combining concepts and efforts for a smarter use of genetic resources in crop breeding

(2016) Teodoro Cardi   PLANT BREEDING

Morphogenic Regulators Baby boom and Wuschel Improve Monocot Transformation

(2016) Keith Lowe et al.   PLANT CELL

Drought and flooding have distinct effects on herbivore-induced responses and resistance inSolanum dulcamara

(2016) Duy Nguyen et al.   PLANT CELL AND ENVIRONMENT

Efficient targeted multiallelic mutagenesis in tetraploid potato (Solanum tuberosum) by transient CRISPR-Cas9 expression in protoplasts

(2016) Mariette Andersson et al.   PLANT CELL REPORTS

Progress of targeted genome modification approaches in higher plants

(2016) Teodoro Cardi et al.   PLANT CELL REPORTS

GAPIT Version 2: An Enhanced Integrated Tool for Genomic Association and Prediction

(2016) You Tang et al.   Plant Genome

Genome-Wide Study of the Tomato SlMLO Gene Family and Its Functional Characterization in Response to the Powdery Mildew Fungus Oidium neolycopersici

(2016) Zheng Zheng et al.   Frontiers in Plant Science

Wheat Phenological Development and Growth Studies As Affected by Drought and Late Season High Temperature Stress under Arid Environment

(2016) Muhammad Z. Ihsan et al.   Frontiers in Plant Science

Optimization of CRISPR/Cas9 genome editing to modify abiotic stress responses in plants

(2016) Yuriko Osakabe et al.   Scientific Reports

Effects of climate change including elevated CO2 concentration, temperature and water deficit on growth, water status, and yield quality of grapevine (Vitis vinifera L.) cultivars

(2015) T. Kizildeniz et al.   AGRICULTURAL WATER MANAGEMENT

Monocot and dicot MLO powdery mildew susceptibility factors are functionally conserved in spite of the evolution of class-specific molecular features

(2015) Michela Appiano et al.   BMC PLANT BIOLOGY

The impact of Septoria tritici Blotch disease on wheat: An EU perspective

(2015) Helen Fones et al.   FUNGAL GENETICS AND BIOLOGY

Virus disease in wheat predicted to increase with a changing climate

(2015) Piotr Trębicki et al.   GLOBAL CHANGE BIOLOGY

Targeted gene mutation in tetraploid potato through transient TALEN expression in protoplasts

(2015) Alessandro Nicolia et al.   JOURNAL OF BIOTECHNOLOGY

Gene targeting and editing in crop plants: a new era of precision opportunities

(2015) Amy R. Rinaldo et al.   MOLECULAR BREEDING

DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins

(2015) Je Wook Woo et al.   NATURE BIOTECHNOLOGY

Landscape genetics, adaptive diversity and population structure inPhaseolus vulgaris

(2015) Monica Rodriguez et al.   NEW PHYTOLOGIST

Barley: a translational model for adaptation to climate change

(2015) Ian K. Dawson et al.   NEW PHYTOLOGIST

Improving cold storage and processing traits in potato through targeted gene knockout

(2015) Benjamin M. Clasen et al.   PLANT BIOTECHNOLOGY JOURNAL

The Regulatory Status of Genome-edited Crops

(2015) Jeffrey D. Wolt et al.   PLANT BIOTECHNOLOGY JOURNAL

Exploring a Tomato Landraces Collection for Fruit-Related Traits by the Aid of a High-Throughput Genomic Platform

(2015) Adriana Sacco et al.   PLoS One

MAGIC populations in crops: current status and future prospects

(2015) B. Emma Huang et al.   THEORETICAL AND APPLIED GENETICS

Future distributions of Fusarium oxysporum f. spp. in European, Middle Eastern and North African agricultural regions under climate change

(2014) Farzin Shabani et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Climate change increases risk of fusarium ear blight on wheat in central China

(2014) X. Zhang et al.   ANNALS OF APPLIED BIOLOGY

Global crop yield response to extreme heat stress under multiple climate change futures

(2014) Delphine Deryng et al.   Environmental Research Letters

Genomics-assisted breeding for drought tolerance in chickpea

(2014) Mahendar Thudi et al.   FUNCTIONAL PLANT BIOLOGY

How do various maize crop models vary in their responses to climate change factors?

(2014) Simona Bassu et al.   GLOBAL CHANGE BIOLOGY

The stay-green trait

(2014) Howard Thomas et al.   JOURNAL OF EXPERIMENTAL BOTANY

An overview of climate change vulnerability: a bibliometric analysis based on Web of Science database

(2014) Bing Wang et al.   NATURAL HAZARDS

Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew

(2014) Yanpeng Wang et al.   NATURE BIOTECHNOLOGY

Abiotic and biotic stress combinations

(2014) Nobuhiro Suzuki et al.   NEW PHYTOLOGIST

Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array

(2014) Shichen Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

Growth, photosynthetic acclimation and yield quality in legumes under climate change simulations: An updated survey

(2014) J.J. Irigoyen et al.   PLANT SCIENCE

Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches

(2014) Mahendar Thudi et al.   PLoS One

Climate-smart agriculture for food security

(2014) Leslie Lipper et al.   Nature Climate Change

Combined linkage disequilibrium and linkage mapping: Bayesian multilocus approach

(2013) P Pikkuhookana et al.   HEREDITY

Virus-induced gene silencing of Arabidopsis thaliana gene homologues in wheat identifies genes conferring improved drought tolerance

(2013) Harish Manmathan et al.   JOURNAL OF EXPERIMENTAL BOTANY

Simultaneous Application of Heat, Drought, and Virus to Arabidopsis Plants Reveals Significant Shifts in Signaling Networks

(2013) C. M. Prasch et al.   PLANT PHYSIOLOGY

Field high-throughput phenotyping: the new crop breeding frontier

(2013) José Luis Araus et al.   TRENDS IN PLANT SCIENCE

Wheat Growth Response to Increased Temperature from Varied Planting Dates and Supplemental Infrared Heating

(2012) M. J. Ottman et al.   AGRONOMY JOURNAL

The interaction of plant biotic and abiotic stresses: from genes to the field

(2012) N. J. Atkinson et al.   JOURNAL OF EXPERIMENTAL BOTANY

Identification of a complete set of functional markers for the selection of er1 powdery mildew resistance in Pisum sativum L.

(2012) Stefano Pavan et al.   MOLECULAR BREEDING

Can genomics boost productivity of orphan crops?

(2012) Rajeev K Varshney et al.   NATURE BIOTECHNOLOGY

High-efficiency TALEN-based gene editing produces disease-resistant rice

(2012) Ting Li et al.   NATURE BIOTECHNOLOGY

Genome-wide efficient mixed-model analysis for association studies

(2012) Xiang Zhou et al.   NATURE GENETICS

Integrated genomics, physiology and breeding approaches for improving drought tolerance in crops

(2012) Reyazul Rouf Mir et al.   THEORETICAL AND APPLIED GENETICS

Genotyping-by-Sequencing for Plant Breeding and Genetics

(2012) Jesse A. Poland et al.   Plant Genome

RADSeq: next-generation population genetics

(2011) J. W. Davey et al.   Briefings in Functional Genomics

Impacts of changing climate and agronomic factors on fusarium ear blight of wheat in the UK

(2011) Jonathan S. West et al.   Fungal Ecology

TILLING - a shortcut in functional genomics

(2011) Marzena Kurowska et al.   JOURNAL OF APPLIED GENETICS

Climate change and diseases of food crops

(2011) J. Luck et al.   PLANT PATHOLOGY

Discovery of Rare Mutations in Populations: TILLING by Sequencing

(2011) H. Tsai et al.   PLANT PHYSIOLOGY

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Agricultural biotechnology for crop improvement in a variable climate: hope or hype?

(2011) Rajeev K. Varshney et al.   TRENDS IN PLANT SCIENCE

Genetic Engineering for Modern Agriculture: Challenges and Perspectives

(2010) Ron Mittler et al.   Annual Review of Plant Biology

The geography of climate change: implications for conservation biogeography

(2010) D. D. Ackerly et al.   DIVERSITY AND DISTRIBUTIONS

Implications of climate change for agricultural productivity in the early twenty-first century

(2010) J. Gornall et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

High-throughput genotyping by whole-genome resequencing

(2009) X. Huang et al.   GENOME RESEARCH

The Ozone Component of Global Change: Potential Effects on Agricultural and Horticultural Plant Yield, Product Quality and Interactions with Invasive Species

(2009) Fitzgerald Booker et al.   Journal of Integrative Plant Biology

Loss of susceptibility as a novel breeding strategy for durable and broad-spectrum resistance

(2009) Stefano Pavan et al.   MOLECULAR BREEDING

Quantitative genetic analysis of biomass and wood chemistry ofPopulusunder different nitrogen levels

(2009) Evandro Novaes et al.   NEW PHYTOLOGIST

Deletion-Based Reverse Genetics in Medicago truncatula

(2009) C. Rogers et al.   PLANT PHYSIOLOGY

Genetic Properties of the Maize Nested Association Mapping Population

(2009) M. D. McMullen et al.   SCIENCE

Effects of timing of water stress on yield and berry size

(2009) M. M. Greven et al.   WATER SCIENCE AND TECHNOLOGY

A Multiparent Advanced Generation Inter-Cross to Fine-Map Quantitative Traits in Arabidopsis thaliana

(2009) Paula X. Kover et al.   PLoS Genetics

Breeding for Yield Potential and Stress Adaptation in Cereals

(2008) José Luis Araus et al.   CRITICAL REVIEWS IN PLANT SCIENCES

From mutations to MAGIC: resources for gene discovery, validation and delivery in crop plants

(2008) Colin Cavanagh et al.   CURRENT OPINION IN PLANT BIOLOGY

Developments in breeding cereals for organic agriculture

(2008) M. S. Wolfe et al.   EUPHYTICA

Genetic Design and Statistical Power of Nested Association Mapping in Maize

(2008) Jianming Yu et al.   GENETICS