Contributions and Challenges of High Throughput qPCR for Determining Antimicrobial Resistance in the Environment: A Critical Review
出版年份 2019 全文链接
标题
Contributions and Challenges of High Throughput qPCR for Determining Antimicrobial Resistance in the Environment: A Critical Review
作者
关键词
-
出版物
MOLECULES
Volume 24, Issue 1, Pages 163
出版商
MDPI AG
发表日期
2019-01-05
DOI
10.3390/molecules24010163
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Precipitation influences pathogenic bacteria and antibiotic resistance gene abundance in storm drain outfalls in coastal sub-tropical waters
- (2018) Warish Ahmed et al. ENVIRONMENT INTERNATIONAL
- Spatial and temporal distribution of antibiotic resistomes in a peri-urban area is associated significantly with anthropogenic activities
- (2018) Qian Xiang et al. ENVIRONMENTAL POLLUTION
- Amendment soil with biochar to control antibiotic resistance genes under unconventional water resources irrigation: Proceed with caution
- (2018) Er-Ping Cui et al. ENVIRONMENTAL POLLUTION
- An overview of technical considerations when using quantitative real-time PCR analysis of gene expression in human exercise research
- (2018) Jujiao Kuang et al. PLoS One
- Prevalence of antibiotic resistance in commensal Escherichia coli among the children in rural hill communities of Northeast India
- (2018) Ashish Kumar Singh et al. PLoS One
- Assessing the safety of thermally processed penicillin mycelial dreg following the soil application: Organic matter's maturation and antibiotic resistance genes
- (2018) Bing Wang et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Antibiotic-Resistance Genes in Waste Water
- (2018) Antti Karkman et al. TRENDS IN MICROBIOLOGY
- A reservoir of ‘historical’ antibiotic resistance genes in remote pristine Antarctic soils
- (2018) Marc W. Van Goethem et al. Microbiome
- Short-term copper exposure as a selection pressure for antibiotic resistance and metal resistance in an agricultural soil
- (2018) Wei Kang et al. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
- High-throughput profiling and analysis of antibiotic resistance genes in East Tiaoxi River, China
- (2017) Ji Zheng et al. ENVIRONMENTAL POLLUTION
- Application of Struvite Alters the Antibiotic Resistome in Soil, Rhizosphere, and Phyllosphere
- (2017) Qing-Lin Chen et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Isothermal assay targeting class 1 integrase gene for environmental surveillance of antibiotic resistance markers
- (2017) Robert D. Stedtfeld et al. JOURNAL OF ENVIRONMENTAL MANAGEMENT
- Most probable number - loop mediated isothermal amplification (MPN-LAMP) for quantifying waterborne pathogens in
- (2017) Farhan Ahmad et al. JOURNAL OF MICROBIOLOGICAL METHODS
- The Divided Bacterial Genome: Structure, Function, and Evolution
- (2017) George C. diCenzo et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Deciphering conjugative plasmid permissiveness in wastewater microbiomes
- (2017) Samuel Jacquiod et al. MOLECULAR ECOLOGY
- Impact of wastewater treatment plant discharge on the contamination of river biofilms by pharmaceuticals and antibiotic resistance
- (2017) Elodie Aubertheau et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Antimicrobial Resistance in the Environment
- (2017) Hassan Waseem et al. WATER ENVIRONMENT RESEARCH
- Metagenomic analysis reveals wastewater treatment plants as hotspots of antibiotic resistance genes and mobile genetic elements
- (2017) Jianhua Guo et al. WATER RESEARCH
- Differences in Integron Cassette Excision Dynamics Shape a Trade-Off between Evolvability and Genetic Capacitance
- (2017) Céline Loot et al. mBio
- Virulence factor activity relationships (VFARs): a bioinformatics perspective
- (2017) Hassan Waseem et al. Environmental Science-Processes & Impacts
- The Resistome of Farmed Fish Feces Contributes to the Enrichment of Antibiotic Resistance Genes in Sediments below Baltic Sea Fish Farms
- (2017) Windi I. Muziasari et al. Frontiers in Microbiology
- A Microfluidic Quantitative Polymerase Chain Reaction Method for the Simultaneous Analysis of Dozens of Antibiotic Resistance and Heavy Metal Resistance Genes
- (2017) Kyle D. Sandberg et al. Environmental Science & Technology Letters
- Comparative gut microbiota and resistome profiling of intensive care patients receiving selective digestive tract decontamination and healthy subjects
- (2017) Elena Buelow et al. Microbiome
- Occurrences and Characterization of Antibiotic Resistant Bacteria and Genetic Determinants of Hospital Wastewaters in a Tropical Country
- (2016) Thai-Hoang Le et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- The Bacterial Mobile Resistome Transfer Network Connecting the Animal and Human Microbiomes
- (2016) Yongfei Hu et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- What are the factors driving antimicrobial resistance? Perspectives from a public event in London, England
- (2016) Enrique Castro-Sánchez et al. BMC INFECTIOUS DISEASES
- Detection of resistance genes and evaluation of water quality at zoo lakes in Brazil
- (2016) Ana Carolina Silva de Faria et al. CIENCIA RURAL
- Long-term field application of sewage sludge increases the abundance of antibiotic resistance genes in soil
- (2016) Qinglin Chen et al. ENVIRONMENT INTERNATIONAL
- Field-based evidence for copper contamination induced changes of antibiotic resistance in agricultural soils
- (2016) Hang-Wei Hu et al. ENVIRONMENTAL MICROBIOLOGY
- High-throughput profiling of antibiotic resistance genes in drinking water treatment plants and distribution systems
- (2016) Like Xu et al. ENVIRONMENTAL POLLUTION
- Long-Term Nickel Contamination Increases the Occurrence of Antibiotic Resistance Genes in Agricultural Soils
- (2016) Hang-Wei Hu et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Metagenomic analysis reveals that bacteriophages are reservoirs of antibiotic resistance genes
- (2016) Jéssica Subirats et al. INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS
- Heatmapper: web-enabled heat mapping for all
- (2016) Sasha Babicki et al. NUCLEIC ACIDS RESEARCH
- Changes of resistome, mobilome and potential hosts of antibiotic resistance genes during the transformation of anaerobic digestion from mesophilic to thermophilic
- (2016) Zhe Tian et al. WATER RESEARCH
- Clusters of Antibiotic Resistance Genes Enriched Together Stay Together in Swine Agriculture
- (2016) Timothy A. Johnson et al. mBio
- Dissemination of Antimicrobial Resistance in Microbial Ecosystems through Horizontal Gene Transfer
- (2016) Christian J. H. von Wintersdorff et al. Frontiers in Microbiology
- Emerging investigators series: sewer surveillance for monitoring antibiotic use and prevalence of antibiotic resistance: urban sewer epidemiology
- (2016) Nicole Fahrenfeld et al. Environmental Science-Water Research & Technology
- Mechanism and Effect of Temperature on Variations in Antibiotic Resistance Genes during Anaerobic Digestion of Dairy Manure
- (2016) Wei Sun et al. Scientific Reports
- Thirty-minute screening of antibiotic resistance genes in bacterial isolates with minimal sample preparation in static self-dispensing 64 and 384 assay cards
- (2015) Tanja Kostić et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Increased levels of antibiotic resistance in urban stream of Jiulongjiang River, China
- (2015) Wei-Ying Ouyang et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Analytical Performance of Multiplexed Screening Test for 10 Antibiotic Resistance Genes from Perianal Swab Samples
- (2015) G. T. Walker et al. CLINICAL CHEMISTRY
- Origin and Proliferation of Multiple-Drug Resistance in Bacterial Pathogens
- (2015) Hsiao-Han Chang et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Sulfonamide and tetracycline resistance genes in total- and culturable-bacterial assemblages in South African aquatic environments
- (2015) Satoru Suzuki et al. Frontiers in Microbiology
- Selective pressure of antibiotics on ARGs and bacterial communities in manure-polluted freshwater-sediment microcosms
- (2015) Wenguang Xiong et al. Frontiers in Microbiology
- Screening Foodstuffs for Class 1 Integrons and Gene Cassettes
- (2015) Liette S. Waldron et al. Jove-Journal of Visualized Experiments
- High Throughput Profiling of Antibiotic Resistance Genes in Urban Park Soils with Reclaimed Water Irrigation
- (2014) Feng-Hua Wang et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Using the class 1 integron-integrase gene as a proxy for anthropogenic pollution
- (2014) Michael R Gillings et al. ISME Journal
- Environmental fate of tetracycline resistance genes originating from swine feedlots in river water
- (2014) Shuyu Jia et al. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH PART B-PESTICIDES FOOD CONTAMINANTS AND AGRICULTURAL WASTES
- MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island
- (2014) Philip M Ashton et al. NATURE BIOTECHNOLOGY
- Antibiotics in the environment
- (2014) D. G. Joakim Larsson UPSALA JOURNAL OF MEDICAL SCIENCES
- DNA microarray analysis reveals that antibiotic resistance-gene diversity in human gut microbiota is age related
- (2014) Na Lu et al. Scientific Reports
- Tetracycline resistance genes acquired at birth
- (2013) Angela M. Alicea-Serrano et al. ARCHIVES OF MICROBIOLOGY
- Metagenomic Profiles of Antibiotic Resistance Genes (ARGs) between Human Impacted Estuary and Deep Ocean Sediments
- (2013) Baowei Chen et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Taxonomic Precision of Different Hypervariable Regions of 16S rRNA Gene and Annotation Methods for Functional Bacterial Groups in Biological Wastewater Treatment
- (2013) Feng Guo et al. PLoS One
- Diverse and abundant antibiotic resistance genes in Chinese swine farms
- (2013) Yong-Guan Zhu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Concentration-dependent activity in natural environments
- (2013) Steve P. Bernier et al. Frontiers in Microbiology
- Correlation Between Upstream Human Activities and Riverine Antibiotic Resistance Genes
- (2012) Amy Pruden et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- The human microbiome: A hot spot of microbial horizontal gene transfer
- (2012) Li Liu et al. GENOMICS
- In-feed antibiotic effects on the swine intestinal microbiome
- (2012) T. Looft et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Metagenomic insights into chlorination effects on microbial antibiotic resistance in drinking water
- (2012) Peng Shi et al. WATER RESEARCH
- Assessing the Probability of Detection of Horizontal Gene Transfer Events in Bacterial Populations
- (2012) Jeffrey P. Townsend et al. Frontiers in Microbiology
- The Gut as Reservoir of Antibiotic Resistance: Microbial Diversity of Tetracycline Resistance in Mother and Infant
- (2011) Lisbeth E. de Vries et al. PLoS One
- Horizontal Gene Exchange in Environmental Microbiota
- (2011) Rustam I. Aminov Frontiers in Microbiology
- An optimized protocol for microarray validation by quantitative PCR using amplified amino allyl labeled RNA
- (2010) Céline Jeanty et al. BMC GENOMICS
- Whole genome amplification and real-time PCR in forensic casework
- (2009) Emiliano Giardina et al. BMC GENOMICS
- The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments
- (2009) S. A. Bustin et al. CLINICAL CHEMISTRY
- Development of a DNA Microarray to Detect Antimicrobial Resistance Genes Identified in the National Center for Biotechnology Information Database
- (2009) Jonathan G. Frye et al. Microbial Drug Resistance
- Development and Experimental Validation of a Predictive Threshold Cycle Equation for Quantification of Virulence and Marker Genes by High-Throughput Nanoliter-Volume PCR on the OpenArray Platform
- (2008) R. D. Stedtfeld et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Analyzing real-time PCR data by the comparative CT method
- (2008) Thomas D Schmittgen et al. Nature Protocols
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now