Exploring functions of long noncoding RNAs across multiple cancers through co-expression network
出版年份 2017 全文链接
标题
Exploring functions of long noncoding RNAs across multiple cancers through co-expression network
作者
关键词
-
出版物
Scientific Reports
Volume 7, Issue 1, Pages -
出版商
Springer Nature
发表日期
2017-04-04
DOI
10.1038/s41598-017-00856-8
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- A novel long non-coding RNA FGF14-AS2 is correlated with progression and prognosis in breast cancer
- (2016) Fan Yang et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Copy number deletion of RAD50 as predictive marker of BRCAness and PARP inhibitor response in BRCA wild type ovarian cancer
- (2016) Min Zhang et al. GYNECOLOGIC ONCOLOGY
- A Long Noncoding RNA Regulates Sister Chromatid Cohesion
- (2016) Francesco P. Marchese et al. MOLECULAR CELL
- Unique features of long non-coding RNA biogenesis and function
- (2016) Jeffrey J. Quinn et al. NATURE REVIEWS GENETICS
- Placenta-Enriched LincRNAs MIR503HG and LINC00629 Decrease Migration and Invasion Potential of JEG-3 Cell Line
- (2016) Bruna Rodrigues Muys et al. PLoS One
- Computational Approaches for Functional Prediction and Characterisation of Long Noncoding RNAs
- (2016) Bethany Signal et al. TRENDS IN GENETICS
- Cross-validation of survival associated biomarkers in gastric cancer using transcriptomic data of 1,065 patients
- (2016) A. Marcell Szász et al. Oncotarget
- Differential Regulatory Analysis Based on Coexpression Network in Cancer Research
- (2016) Junyi Li et al. Biomed Research International
- Discovery and characterization of long intergenic non-coding RNAs (lincRNA) module biomarkers in prostate cancer: an integrative analysis of RNA-Seq data
- (2015) Weirong Cui et al. BMC GENOMICS
- LncRNA2Function: a comprehensive resource for functional investigation of human lncRNAs based on RNA-seq data
- (2015) Qinghua Jiang et al. BMC GENOMICS
- Advances in long noncoding RNAs: identification, structure prediction and function annotation
- (2015) Xingli Guo et al. Briefings in Functional Genomics
- Comprehensive Genomic Characterization of Long Non-coding RNAs across Human Cancers
- (2015) Xiaohui Yan et al. CANCER CELL
- Transcriptome Analysis of Recurrently Deregulated Genes across Multiple Cancers Identifies New Pan-Cancer Biomarkers
- (2015) Bogumil Kaczkowski et al. CANCER RESEARCH
- Interleukin-6: Biology, signaling and strategies of blockade
- (2015) Fred Schaper et al. CYTOKINE & GROWTH FACTOR REVIEWS
- Long Noncoding RNA in Hematopoiesis and Immunity
- (2015) Ansuman T. Satpathy et al. IMMUNITY
- Long non-coding RNA UCA1 promotes glutamine metabolism by targeting miR-16 in human bladder cancer
- (2015) Hui-Jin Li et al. JAPANESE JOURNAL OF CLINICAL ONCOLOGY
- Prognostic value of CD56 in patients with acute myeloid leukemia: a meta-analysis
- (2015) Shuangnian Xu et al. JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY
- CARMEN, a human super enhancer-associated long noncoding RNA controlling cardiac specification, differentiation and homeostasis
- (2015) Samir Ounzain et al. JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY
- The lncRNA DRAIC/PCAT29 Locus Constitutes a Tumor-Suppressive Nexus
- (2015) K. Sakurai et al. MOLECULAR CANCER RESEARCH
- The landscape of long noncoding RNAs in the human transcriptome
- (2015) Matthew K Iyer et al. NATURE GENETICS
- The emerging role of lncRNAs in cancer
- (2015) Maite Huarte NATURE MEDICINE
- Long noncoding RNAs in cardiac development and ageing
- (2015) Nature Reviews Cardiology
- Pan-cancer transcriptome analysis reveals long noncoding RNAs with conserved function
- (2015) Christopher R Cabanski et al. RNA Biology
- The Landscape of long noncoding RNA classification
- (2015) Georges St. Laurent et al. TRENDS IN GENETICS
- Hydrogen peroxide inducible clone-5 mediates reactive oxygen species signaling for hepatocellular carcinoma progression
- (2015) Jia-Ru Wu et al. Oncotarget
- PVT1: A Rising Star among Oncogenic Long Noncoding RNAs
- (2015) Teresa Colombo et al. Biomed Research International
- Knockdown of a novel lincRNA AATBC suppresses proliferation and induces apoptosis in bladder cancer
- (2015) Fengjin Zhao et al. Oncotarget
- The Chemokine CCL2 Increases Prostate Tumor Growth and Bone Metastasis through Macrophage and Osteoclast Recruitment
- (2015) Kosuke Mizutani et al. NEOPLASIA
- Recurrent read-through fusion transcripts in breast cancer
- (2014) Katherine E. Varley et al. BREAST CANCER RESEARCH AND TREATMENT
- Decreased expression of the long non-coding RNA FENDRR is associated with poor prognosis in gastric cancer and FENDRR regulates gastric cancer cell metastasis by affecting fibronectin1 expression
- (2014) Tong-peng Xu et al. Journal of Hematology & Oncology
- The lncRNA PCAT29 Inhibits Oncogenic Phenotypes in Prostate Cancer
- (2014) Rohit Malik et al. MOLECULAR CANCER RESEARCH
- Long Noncoding RNA TARID Directs Demethylation and Activation of the Tumor Suppressor TCF21 via GADD45A
- (2014) Khelifa Arab et al. MOLECULAR CELL
- PVT1 dependence in cancer with MYC copy-number increase
- (2014) Yuen-Yi Tseng et al. NATURE
- lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs
- (2014) Xiu Cheng Quek et al. NUCLEIC ACIDS RESEARCH
- Vascular Endothelial Growth Factor-B in Physiology and Disease
- (2014) Maija Bry et al. PHYSIOLOGICAL REVIEWS
- Long Non-Coding RNAs as Surrogate Indicators for Chemical Stress Responses in Human-Induced Pluripotent Stem Cells
- (2014) Hidenori Tani et al. PLoS One
- Volatile evolution of long noncoding RNA repertoires: mechanisms and biological implications
- (2014) Aurélie Kapusta et al. TRENDS IN GENETICS
- A new tumor suppressor LncRNA ADAMTS9-AS2 is regulated by DNMT1 and inhibits migration of glioma cells
- (2014) Jie Yao et al. TUMOR BIOLOGY
- Gene co-expression network analysis reveals common system-level properties of prognostic genes across cancer types
- (2014) Yang Yang et al. Nature Communications
- Palladin regulation of the actin structures needed for cancer invasion
- (2014) Paul Najm et al. Cell Adhesion & Migration
- Comprehensive Functional Annotation of 77 Prostate Cancer Risk Loci
- (2014) Dennis J. Hazelett et al. PLoS Genetics
- Identification of short-lived long non-coding RNAs as surrogate indicators for chemical stress response
- (2013) Hidenori Tani et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Long Noncoding RNAs: Cellular Address Codes in Development and Disease
- (2013) Pedro J. Batista et al. CELL
- The Tissue-Specific lncRNA Fendrr Is an Essential Regulator of Heart and Body Wall Development in the Mouse
- (2013) Phillip Grote et al. DEVELOPMENTAL CELL
- Androgen-responsive long noncoding RNA CTBP1-AS promotes prostate cancer
- (2013) Ken-ichi Takayama et al. EMBO JOURNAL
- In focus: MLL-rearranged leukemia
- (2013) J de Boer et al. LEUKEMIA
- Whole-genome and whole-exome sequencing of bladder cancer identifies frequent alterations in genes involved in sister chromatid cohesion and segregation
- (2013) Guangwu Guo et al. NATURE GENETICS
- The Cancer Genome Atlas Pan-Cancer analysis project
- (2013) John N Weinstein et al. NATURE GENETICS
- Long non-coding RNAs: new players in cell differentiation and development
- (2013) Alessandro Fatica et al. NATURE REVIEWS GENETICS
- Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer
- (2013) Zhou Du et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- A High-Dimensional, Deep-Sequencing Study of Lung Adenocarcinoma in Female Never-Smokers
- (2013) Sang Cheol Kim et al. PLoS One
- Online Survival Analysis Software to Assess the Prognostic Value of Biomarkers Using Transcriptomic Data in Non-Small-Cell Lung Cancer
- (2013) Balázs Győrffy et al. PLoS One
- RNA-seq analysis of prostate cancer in the Chinese population identifies recurrent gene fusions, cancer-associated long noncoding RNAs and aberrant alternative splicings
- (2012) Shancheng Ren et al. CELL RESEARCH
- Implementing an online tool for genome-wide validation of survival-associated biomarkers in ovarian-cancer using microarray data from 1287 patients
- (2012) Balázs Győrffy et al. ENDOCRINE-RELATED CANCER
- GENCODE: The reference human genome annotation for The ENCODE Project
- (2012) J. Harrow et al. GENOME RESEARCH
- MEG3 noncoding RNA: a tumor suppressor
- (2012) Yunli Zhou et al. JOURNAL OF MOLECULAR ENDOCRINOLOGY
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- LNCipedia: a database for annotated human lncRNA transcript sequences and structures
- (2012) Pieter-Jan Volders et al. NUCLEIC ACIDS RESEARCH
- Rfam 11.0: 10 years of RNA families
- (2012) Sarah W. Burge et al. NUCLEIC ACIDS RESEARCH
- Hallmarks of Cancer: The Next Generation
- (2011) Douglas Hanahan et al. CELL
- MALAT-1: A long non-coding RNA and its important 3' end functional motif in colorectal cancer metastasis
- (2011) Zuguo Li INTERNATIONAL JOURNAL OF ONCOLOGY
- Genomic Maps of Long Noncoding RNA Occupancy Reveal Principles of RNA-Chromatin Interactions
- (2011) Ci Chu et al. MOLECULAR CELL
- The genomic binding sites of a noncoding RNA
- (2011) M. D. Simon et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Forkhead Box F1 Regulates Tumor-Promoting Properties of Cancer-Associated Fibroblasts in Lung Cancer
- (2010) Roy-Akira Saito et al. CANCER RESEARCH
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- A transcriptional sketch of a primary human breast cancer by 454 deep sequencing
- (2009) Alessandro Guffanti et al. BMC GENOMICS
- An online survival analysis tool to rapidly assess the effect of 22,277 genes on breast cancer prognosis using microarray data of 1,809 patients
- (2009) Balazs Györffy et al. BREAST CANCER RESEARCH AND TREATMENT
- Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
- (2009) Da Wei Huang et al. Nature Protocols
- Collective cell migration in morphogenesis, regeneration and cancer
- (2009) Peter Friedl et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- WGCNA: an R package for weighted correlation network analysis
- (2008) Peter Langfelder et al. BMC BIOINFORMATICS
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