标题
Recent advances and challenges in plant phosphoproteomics
作者
关键词
-
出版物
PROTEOMICS
Volume 15, Issue 5-6, Pages 1127-1141
出版商
Wiley
发表日期
2014-11-29
DOI
10.1002/pmic.201400410
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Electrochemical methods for detection of post-translational modifications of proteins
- (2014) Victoria V. Shumyantseva et al. BIOSENSORS & BIOELECTRONICS
- Quantitative phosphoproteomic profiling of fiber differentiation and initiation in a fiberless mutant of cotton
- (2014) Qifeng Ma et al. BMC GENOMICS
- Phosphoproteomics in photosynthetic organisms
- (2014) William O. Slade et al. ELECTROPHORESIS
- Phosphorylation ofArabidopsisUbiquitin Ligase ATL31 Is Critical for Plant Carbon/Nitrogen Nutrient Balance Response and Controls the Stability of 14-3-3 Proteins
- (2014) Shigetaka Yasuda et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Identification of Multiple Phosphorylation Sites on Maize Endosperm Starch Branching Enzyme IIb, a Key Enzyme in Amylopectin Biosynthesis
- (2014) Amina Makhmoudova et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Photosynthetic activity influences cellulose biosynthesis and phosphorylation of proteins involved therein in Arabidopsis leaves
- (2014) Edouard Boex-Fontvieille et al. JOURNAL OF EXPERIMENTAL BOTANY
- Quantitative Proteomics Reveals the Role of Protein Phosphorylation in Rice Embryos during Early Stages of Germination
- (2014) Chao Han et al. JOURNAL OF PROTEOME RESEARCH
- Comparative Phosphoproteome Analysis of the Developing Grains in Bread Wheat (Triticum aestivum L.) under Well-Watered and Water-Deficit Conditions
- (2014) Ming Zhang et al. JOURNAL OF PROTEOME RESEARCH
- Confident and sensitive phosphoproteomics using combinations of collision induced dissociation and electron transfer dissociation
- (2014) Mark O. Collins et al. Journal of Proteomics
- Phosphoproteome analysis reveals new drought response and defense mechanisms of seedling leaves in bread wheat (Triticum aestivum L.)
- (2014) Ming Zhang et al. Journal of Proteomics
- Meta-Analysis of Arabidopsis thaliana Phospho-Proteomics Data Reveals Compartmentalization of Phosphorylation Motifs
- (2014) K. J. van Wijk et al. PLANT CELL
- Phosphoproteomic Analyses Reveal Early Signaling Events in the Osmotic Stress Response
- (2014) K. E. Stecker et al. PLANT PHYSIOLOGY
- Quantitative Phosphoproteomics Analysis of Nitric Oxide–Responsive Phosphoproteins in Cotton Leaf
- (2014) Shuli Fan et al. PLoS One
- Phosphoproteomic analysis of the non-seed vascular plant model Selaginella moellendorffii
- (2014) Xi Chen et al. Proteome Science
- Probing phosphorylation-dependent protein interactions within functional domains of histone deacetylase 5 (HDAC5)
- (2014) Amanda J. Guise et al. PROTEOMICS
- Sweet and Sour: The Impact of Differential Glycosylation in Cancer Cells Undergoing Epithelial–Mesenchymal Transition
- (2014) Leonardo Freire-de-Lima Frontiers in Oncology
- Circles within circles: crosstalk between protein Ser/Thr/Tyr-phosphorylation and Met oxidation
- (2013) R Rao et al. BMC BIOINFORMATICS
- Phosphoproteomics-More than meets the eye
- (2013) Stefan Loroch et al. ELECTROPHORESIS
- Epidermal Growth Factor Stimulates Extracellular-Signal Regulated Kinase Phosphorylation of a Novel Site on Cytoplasmic Dynein Intermediate Chain 2
- (2013) Ashok Pullikuth et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Proteomic and phosphoproteomic analysis of polyethylene glycol-induced osmotic stress in root tips of common bean (Phaseolus vulgaris L.)
- (2013) Zhong-Bao Yang et al. JOURNAL OF EXPERIMENTAL BOTANY
- Sucrose-induced Receptor Kinase SIRK1 Regulates a Plasma Membrane Aquaporin in Arabidopsis
- (2013) Xu Na Wu et al. MOLECULAR & CELLULAR PROTEOMICS
- Systems-wide Analysis of K-Ras, Cdc42, and PAK4 Signaling by Quantitative Phosphoproteomics
- (2013) Florian Gnad et al. MOLECULAR & CELLULAR PROTEOMICS
- Battle through Signaling between Wheat and the Fungal PathogenSeptoria triticiRevealed by Proteomics and Phosphoproteomics
- (2013) Fen Yang et al. MOLECULAR & CELLULAR PROTEOMICS
- Quantitative Measurement of Phosphoproteome Response to Osmotic Stress inArabidopsisBased on Library-Assisted eXtracted Ion Chromatogram (LAXIC)
- (2013) Liang Xue et al. MOLECULAR & CELLULAR PROTEOMICS
- Quantitative Phosphoproteomics after Auxin-stimulated Lateral Root Induction Identifies an SNX1 Protein Phosphorylation Site Required for Growth
- (2013) Hongtao Zhang et al. MOLECULAR & CELLULAR PROTEOMICS
- Stable Isotope Metabolic Labeling-based Quantitative Phosphoproteomic Analysis of Arabidopsis Mutants Reveals Ethylene-regulated Time-dependent Phosphoproteins and Putative Substrates of Constitutive Triple Response 1 Kinase
- (2013) Zhu Yang et al. MOLECULAR & CELLULAR PROTEOMICS
- Evolution and functional cross-talk of protein post-translational modifications
- (2013) Pedro Beltrao et al. Molecular Systems Biology
- Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation
- (2013) Danielle L Swaney et al. NATURE METHODS
- P3DB 3.0: From plant phosphorylation sites to protein networks
- (2013) Qiuming Yao et al. NUCLEIC ACIDS RESEARCH
- Parallel Proteomic and Phosphoproteomic Analyses of Successive Stages of Maize Leaf Development
- (2013) M. R. Facette et al. PLANT CELL
- Protein SUMOylation and plant abiotic stress signaling: in silico case study of rice RLKs, heat-shock and Ca2+-binding proteins
- (2013) Manish L. Raorane et al. PLANT CELL REPORTS
- Human 14-3-3 Paralogs Differences Uncovered by Cross-Talk of Phosphorylation and Lysine Acetylation
- (2013) Marina Uhart et al. PLoS One
- Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action
- (2013) P. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genetics and Phosphoproteomics Reveal a Protein Phosphorylation Network in the Abscisic Acid Signaling Pathway in Arabidopsis thaliana
- (2013) T. Umezawa et al. Science Signaling
- Dual Coordination of Post Translational Modifications in Human Protein Networks
- (2013) Jonathan Woodsmith et al. PLoS Computational Biology
- Quantitation, networking, and function of protein phosphorylation in plant cell
- (2013) Lin Zhu et al. Frontiers in Plant Science
- MASCP gator: an overview of the Arabidopsis proteomic aggregation portal
- (2013) Gregory W. Mann et al. Frontiers in Plant Science
- Advances in phosphopeptide enrichment techniques for phosphoproteomics
- (2012) Luisa Beltran et al. AMINO ACIDS
- Ultra Acidic Strong Cation Exchange Enabling the Efficient Enrichment of Basic Phosphopeptides
- (2012) Marco L. Hennrich et al. ANALYTICAL CHEMISTRY
- MMFPh: a maximal motif finder for phosphoproteomics datasets
- (2012) Tuobin Wang et al. BIOINFORMATICS
- The cyclic nucleotide cGMP is involved in plant hormone signalling and alters phosphorylation of Arabidopsis thaliana root proteins
- (2012) Jean Charles Isner et al. JOURNAL OF EXPERIMENTAL BOTANY
- Modulation of Protein Phosphorylation,N-Glycosylation and Lys-Acetylation in Grape (Vitis vinifera) Mesocarp and Exocarp Owing toLobesia botranaInfection
- (2012) Marcella N. Melo-Braga et al. MOLECULAR & CELLULAR PROTEOMICS
- Absolute Quantitation of Isoforms of Post-translationally Modified Proteins in Transgenic Organism
- (2012) Yaojun Li et al. MOLECULAR & CELLULAR PROTEOMICS
- Quantitative Phosphoproteomic Analysis of Soybean Root Hairs Inoculated withBradyrhizobium japonicum
- (2012) Tran Hong Nha Nguyen et al. MOLECULAR & CELLULAR PROTEOMICS
- Phosphoproteome Dynamics Upon Changes in Plant Water Status Reveal Early Events Associated With Rapid Growth Adjustment in Maize Leaves
- (2012) Ludovic Bonhomme et al. MOLECULAR & CELLULAR PROTEOMICS
- Rapid Phosphoproteomic and Transcriptomic Changes in the Rhizobia-legume Symbiosis
- (2012) Christopher M. Rose et al. MOLECULAR & CELLULAR PROTEOMICS
- PTMScan Direct: Identification and Quantification of Peptides from Critical Signaling Proteins by Immunoaffinity Enrichment Coupled with LC-MS/MS
- (2012) Matthew P. Stokes et al. MOLECULAR & CELLULAR PROTEOMICS
- Identification of Novelin vivoMAP Kinase Substrates inArabidopsis thalianaThrough Use of Tandem Metal Oxide Affinity Chromatography
- (2012) Wolfgang Hoehenwarter et al. MOLECULAR & CELLULAR PROTEOMICS
- Targeted Proteomic Quantification on Quadrupole-Orbitrap Mass Spectrometer
- (2012) Sebastien Gallien et al. MOLECULAR & CELLULAR PROTEOMICS
- PTMcode: a database of known and predicted functional associations between post-translational modifications in proteins
- (2012) Pablo Minguez et al. NUCLEIC ACIDS RESEARCH
- Quantitative Phosphoproteome Profiling of Iron-Deficient Arabidopsis Roots
- (2012) P. Lan et al. PLANT PHYSIOLOGY
- Functional Phosphoproteomic Analysis Reveals That a Serine-62-Phosphorylated Isoform of Ethylene Response Factor110 Is Involved in Arabidopsis Bolting
- (2012) L. Zhu et al. PLANT PHYSIOLOGY
- Phosphoproteomic Analysis of Seed Maturation in Arabidopsis, Rapeseed, and Soybean
- (2012) L. J. Meyer et al. PLANT PHYSIOLOGY
- The Functional Network of the Arabidopsis Plastoglobule Proteome Based on Quantitative Proteomics and Genome-Wide Coexpression Analysis
- (2012) P. K. Lundquist et al. PLANT PHYSIOLOGY
- Medicago PhosphoProtein Database: a repository for Medicago truncatula phosphoprotein data
- (2012) Christopher M. Rose et al. Frontiers in Plant Science
- Predicting and Analyzing Protein Phosphorylation Sites in Plants Using Musite
- (2012) Qiuming Yao et al. Frontiers in Plant Science
- Enrichment techniques employed in phosphoproteomics
- (2011) Jan Fíla et al. AMINO ACIDS
- Tools for analyzing the phosphoproteome and other phosphorylated biomolecules: A review
- (2011) Alexander Leitner et al. ANALYTICA CHIMICA ACTA
- Advances in Quantitative Phosphoproteomics
- (2011) Carol L. Nilsson ANALYTICAL CHEMISTRY
- Cross Talk Between O-GlcNAcylation and Phosphorylation: Roles in Signaling, Transcription, and Chronic Disease
- (2011) Gerald W. Hart et al. Annual Review of Biochemistry
- pep2pro: a new tool for comprehensive proteome data analysis to reveal information about organ-specific proteomes in Arabidopsis thaliana
- (2011) Katja Baerenfaller et al. Integrative Biology
- Correct Interpretation of Comprehensive Phosphorylation Dynamics Requires Normalization by Protein Expression Changes
- (2011) Ronghu Wu et al. MOLECULAR & CELLULAR PROTEOMICS
- A large-scale method to measure absolute protein phosphorylation stoichiometries
- (2011) Ronghu Wu et al. NATURE METHODS
- Using multiplex-staining to study changes in the maize leaf phosphoproteome in response to mechanical wounding
- (2011) Elżbieta Lewandowska-Gnatowska et al. PHYTOCHEMISTRY
- Extending SILAC to Proteomics of Plant Cell Lines
- (2011) Wolfgang Schütz et al. PLANT CELL
- Comparative phosphoproteomic analysis of microsomal fractions of Arabidopsis thaliana and Oryza sativa subjected to high salinity
- (2011) Ing-Feng Chang et al. PLANT SCIENCE
- Differential Phosphorylation of Ribosomal Proteins in Arabidopsis thaliana Plants during Day and Night
- (2011) Maria V. Turkina et al. PLoS One
- Bioinformatic Analysis and Post-Translational Modification Crosstalk Prediction of Lysine Acetylation
- (2011) Zhike Lu et al. PLoS One
- Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF)
- (2011) S. Reiland et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Less label, more free: Approaches in label-free quantitative mass spectrometry
- (2011) Karlie A. Neilson et al. PROTEOMICS
- Platforms for enrichment of phosphorylated proteins and peptides in proteomics
- (2011) Iris L. Batalha et al. TRENDS IN BIOTECHNOLOGY
- N,N-Dimethyl Leucines as Novel Isobaric Tandem Mass Tags for Quantitative Proteomics and Peptidomics
- (2010) Feng Xiang et al. ANALYTICAL CHEMISTRY
- Undesirable Charge-Enhancement of Isobaric Tagged Phosphopeptides Leads to Reduced Identification Efficiency
- (2010) Tine E. Thingholm et al. JOURNAL OF PROTEOME RESEARCH
- Comparison of metal and metal oxide media for phosphopeptide enrichment prior to mass spectrometric analyses
- (2010) Matthew B. Gates et al. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
- Decoding signalling networks by mass spectrometry-based proteomics
- (2010) Chunaram Choudhary et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- The phosphoproteome of Arabidopsis plants lacking the oxidative signal-inducible1 (OXI1) protein kinase
- (2010) Andrew J.M. Howden et al. NEW PHYTOLOGIST
- In planta changes in protein phosphorylation induced by the plant hormone abscisic acid
- (2010) K. G. Kline et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Phosphopeptide fragmentation and analysis by mass spectrometry
- (2009) Paul J. Boersema et al. JOURNAL OF MASS SPECTROMETRY
- Quantitative Phosphoproteomics of Tomato Mounting a Hypersensitive Response Reveals a Swift Suppression of Photosynthetic Activity and a Differential Role for Hsp90 Isoforms
- (2009) Iris J. E. Stulemeijer et al. JOURNAL OF PROTEOME RESEARCH
- PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update
- (2009) Pawel Durek et al. NUCLEIC ACIDS RESEARCH
- Phosphoproteomic analysis of ethylene-regulated protein phosphorylation in etiolated seedlings of Arabidopsis mutant ein2 using two-dimensional separations coupled with a hybrid quadrupole time-of-flight mass spectrometer
- (2009) Hao Li et al. PROTEOMICS
- Plant phosphoproteomics: An update
- (2009) Birgit Kersten et al. PROTEOMICS
- Phosphoproteomics
- (2009) Nurhan Ozlu et al. Wiley Interdisciplinary Reviews-Systems Biology and Medicine
- Sequential Transphosphorylation of the BRI1/BAK1 Receptor Kinase Complex Impacts Early Events in Brassinosteroid Signaling
- (2008) Xiaofeng Wang et al. DEVELOPMENTAL CELL
- Absolute quantification of Medicago truncatula sucrose synthase isoforms and N-metabolism enzymes in symbiotic root nodules and the detection of novel nodule phosphoproteins by mass spectrometry
- (2008) S. Wienkoop et al. JOURNAL OF EXPERIMENTAL BOTANY
- A Comparative Study of Electrostatic Repulsion-Hydrophilic Interaction Chromatography (ERLIC) versus SCX-IMAC-Based Methods for Phosphopeptide Isolation/Enrichment
- (2008) Chee Sian Gan et al. JOURNAL OF PROTEOME RESEARCH
- Comparison of MS2-Only, MSA, and MS2/MS3Methodologies for Phosphopeptide Identification
- (2008) Peter J. Ulintz et al. JOURNAL OF PROTEOME RESEARCH
- Multiple Phosphorylations in the C-terminal Tail of Plant Plasma Membrane Aquaporins
- (2008) Sodana Prak et al. MOLECULAR & CELLULAR PROTEOMICS
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study
- (2008) Laurence V. Bindschedler et al. PHYTOCHEMISTRY
- SILIP: a novel stable isotope labeling method forin plantaquantitative proteomic analysis
- (2008) Jennifer E. Schaff et al. PLANT JOURNAL
- Protein Tyrosine Kinases and Protein Tyrosine Phosphatases Are Involved in Abscisic Acid-Dependent Processes in Arabidopsis Seeds and Suspension Cells
- (2008) T. Ghelis et al. PLANT PHYSIOLOGY
- Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography
- (2008) Guanghui Han et al. PROTEOMICS
- Triplex protein quantification based on stable isotope labeling by peptide dimethylation applied to cell and tissue lysates
- (2008) Paul J. Boersema et al. PROTEOMICS
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