The Phylogenomic Roots of Modern Biochemistry: Origins of Proteins, Cofactors and Protein Biosynthesis
出版年份 2011 全文链接
标题
The Phylogenomic Roots of Modern Biochemistry: Origins of Proteins, Cofactors and Protein Biosynthesis
作者
关键词
-
出版物
JOURNAL OF MOLECULAR EVOLUTION
Volume 74, Issue 1-2, Pages 1-34
出版商
Springer Nature
发表日期
2011-12-31
DOI
10.1007/s00239-011-9480-1
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- The proteomic complexity and rise of the primordial ancestor of diversified life
- (2011) Kyung Mo Kim et al. BMC EVOLUTIONARY BIOLOGY
- Protein Folding Absent Selection
- (2011) Thomas H. LaBean et al. Genes
- Current understanding of fatty acid biosynthesis and the acyl carrier protein
- (2010) David I. Chan et al. BIOCHEMICAL JOURNAL
- Exploring the interplay of stability and function in protein evolution
- (2010) Gustavo Caetano-Anollés et al. BIOESSAYS
- The RNA dreamtime
- (2010) Charles G. Kurland BIOESSAYS
- The CoFactor database: organic cofactors in enzyme catalysis
- (2010) Julia D. Fischer et al. BIOINFORMATICS
- Predicted class-I aminoacyl tRNA synthetase-like proteins in non-ribosomal peptide synthesis
- (2010) L Aravind et al. Biology Direct
- The ancient history of the structure of ribonuclease P and the early origins of Archaea
- (2010) Feng-Jie Sun et al. BMC BIOINFORMATICS
- Proteome Evolution and the Metabolic Origins of Translation and Cellular Life
- (2010) Derek Caetano-Anollés et al. JOURNAL OF MOLECULAR EVOLUTION
- Emergence and Evolution of Modern Molecular Functions Inferred from Phylogenomic Analysis of Ontological Data
- (2010) K. M. Kim et al. MOLECULAR BIOLOGY AND EVOLUTION
- Evolution of Outer Membrane β-Barrels from an Ancestral ββ Hairpin
- (2010) M. Remmert et al. MOLECULAR BIOLOGY AND EVOLUTION
- A Universal Molecular Clock of Protein Folds and Its Power in Tracing the Early History of Aerobic Metabolism and Planet Oxygenation
- (2010) Minglei Wang et al. MOLECULAR BIOLOGY AND EVOLUTION
- A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns
- (2010) Tomislav Domazet-Lošo et al. NATURE
- The structure and mechanism of the Mycobacterium tuberculosis cyclodityrosine synthetase
- (2010) Matthew W Vetting et al. Nature Chemical Biology
- New functions of aminoacyl-tRNA synthetases beyond translation
- (2010) Min Guo et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Which Way to Life?
- (2010) Antonio Lazcano ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES
- History of biological metal utilization inferred through phylogenomic analysis of protein structures
- (2010) C. L. Dupont et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
- (2010) M. Mocibob et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms
- (2010) Erik Wallin et al. PROTEIN SCIENCE
- Exploring the Universe of Protein Structures beyond the Protein Data Bank
- (2010) Pilar Cossio et al. PLoS Computational Biology
- Conformational Dynamics in the Acyl-CoA Synthetases, Adenylation Domains of Non-ribosomal Peptide Synthetases, and Firefly Luciferase
- (2009) Andrew M. Gulick ACS Chemical Biology
- The origin, evolution and structure of the protein world
- (2009) Gustavo Caetano-Anollés et al. BIOCHEMICAL JOURNAL
- Genomic and structural aspects of protein evolution
- (2009) Cyrus Chothia et al. BIOCHEMICAL JOURNAL
- Biotin
- (2009) Janos Zempleni et al. BIOFACTORS
- One ancestor for two codes viewed from the perspective of two complementary modes of tRNA aminoacylation
- (2009) Andrei S Rodin et al. Biology Direct
- Helix insertion into bilayers and the evolution of membrane proteins
- (2009) Robert Renthal CELLULAR AND MOLECULAR LIFE SCIENCES
- Recent mechanistic insights into eukaryotic ribosomes
- (2009) Marina V Rodnina et al. CURRENT OPINION IN CELL BIOLOGY
- tRNA as an active chemical scaffold for diverse chemical transformations
- (2009) Christopher S. Francklyn et al. FEBS LETTERS
- The Evolutionary History of the Structure of 5S Ribosomal RNA
- (2009) Feng-Jie Sun et al. JOURNAL OF MOLECULAR EVOLUTION
- Formal Proof that the Split Genes of tRNAs of Nanoarchaeum equitans Are an Ancestral Character
- (2009) Massimo Di Giulio JOURNAL OF MOLECULAR EVOLUTION
- Working outside the protein-synthesis rules: insights into non-ribosomal peptide synthesis
- (2009) Mohamed A. Marahiel JOURNAL OF PEPTIDE SCIENCE
- Amidoligases with ATP-grasp, glutamine synthetase-like and acetyltransferase-like domains: synthesis of novel metabolites and peptide modifications of proteins
- (2009) Lakshminarayan M. Iyer et al. Molecular BioSystems
- Structural insights into nonribosomal peptide enzymatic assembly lines
- (2009) Alexander Koglin et al. NATURAL PRODUCT REPORTS
- Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions
- (2009) Matthew W. Powner et al. NATURE
- Cyclodipeptide synthases are a family of tRNA-dependent peptide bond–forming enzymes
- (2009) Muriel Gondry et al. Nature Chemical Biology
- The ribosome as a platform for co-translational processing, folding and targeting of newly synthesized proteins
- (2009) Günter Kramer et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- A Man-Made ATP-Binding Protein Evolved Independent of Nature Causes Abnormal Growth in Bacterial Cells
- (2009) Joshua M. Stomel et al. PLoS One
- Autocatalysis and organocatalysis with synthetic structures
- (2009) S. Kamioka et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Nature of the protein universe
- (2009) M. Levitt PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structure is three to ten times more conserved than sequence-A study of structural response in protein cores
- (2009) Kristoffer Illergård et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Self-assembly and function of primitive cell membranes
- (2009) Andrew Pohorille et al. RESEARCH IN MICROBIOLOGY
- Structures of the Ribosome in Intermediate States of Ratcheting
- (2009) W. Zhang et al. SCIENCE
- Self-Sustained Replication of an RNA Enzyme
- (2009) T. A. Lincoln et al. SCIENCE
- The Evolutionary Mechanics of Domain Organization in Proteomes and the Rise of Modularity in the Protein World
- (2009) Minglei Wang et al. STRUCTURE
- The Protein Folding Problem
- (2008) Ken A. Dill et al. Annual Review of Biophysics
- Predicting the conformations of peptides and proteins in early evolution. A review article submitted to Biology Direct
- (2008) E James Milner-White et al. Biology Direct
- Medium- and short-chain dehydrogenase/reductase gene and protein families
- (2008) K. L. Kavanagh et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Association energetics of membrane spanning α-helices
- (2008) K MACKENZIE et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Making Molecules Make Themselves - the Chemistry of Artificial Replicators
- (2008) Annick Vidonne et al. EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
- Structural and functional mapping of the archaeal multi-aminoacyl-tRNA synthetase complex
- (2008) Corinne D. Hausmann et al. FEBS LETTERS
- On the origin of the genetic code: signatures of its primordial complementarity in tRNAs and aminoacyl-tRNA synthetases
- (2008) S N Rodin et al. HEREDITY
- Evolutionary origins and directed evolution of RNA
- (2008) Andrew D. Ellington et al. INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
- The origin and evolution of modern metabolism
- (2008) Gustavo Caetano-Anollés et al. INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
- Template-directed synthesis of a genetic polymer in a model protocell
- (2008) Sheref S. Mansy et al. NATURE
- SUPERFAMILY—sophisticated comparative genomics, data mining, visualization and phylogeny
- (2008) Derek Wilson et al. NUCLEIC ACIDS RESEARCH
- The Transporter Classification Database: recent advances
- (2008) M. H. Saier et al. NUCLEIC ACIDS RESEARCH
- PDBsum new things
- (2008) R. A. Laskowski NUCLEIC ACIDS RESEARCH
- Structure and mechanism of ATP-binding cassette transporters
- (2008) K. P Locher PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Evolutionary Patterns in the Sequence and Structure of Transfer RNA: A Window into Early Translation and the Genetic Code
- (2008) Feng-Jie Sun et al. PLoS One
- RNA-assisted catalysis in a protein enzyme: The 2'-hydroxyl of tRNAThr A76 promotes aminoacylation by threonyl-tRNA synthetase
- (2008) A. Minajigi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Investigations of valanimycin biosynthesis: Elucidation of the role of seryl-tRNA
- (2008) R. P. Garg et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Novel protein folds and their nonsequential structural analogs
- (2008) Aysam Guerler et al. PROTEIN SCIENCE
- A signal relay between ribosomal protein S12 and elongation factor EF-Tu during decoding of mRNA
- (2008) S. T. Gregory et al. RNA
- Crystal Structure of the Termination Module of a Nonribosomal Peptide Synthetase
- (2008) A. Tanovic et al. SCIENCE
- The Implausibility of Metabolic Cycles on the Prebiotic Earth
- (2008) Leslie E Orgel PLOS BIOLOGY
- Domain Tree-Based Analysis of Protein Architecture Evolution
- (2007) K. Forslund et al. MOLECULAR BIOLOGY AND EVOLUTION
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