Proteome Evolution and the Metabolic Origins of Translation and Cellular Life

The evolution and functional repertoire of translation proteins following the origin of life

(2010) Aaron D Goldman et al.   Biology Direct

The ancient history of the structure of ribonuclease P and the early origins of Archaea

(2010) Feng-Jie Sun et al.   BMC BIOINFORMATICS

Emergence and Evolution of Modern Molecular Functions Inferred from Phylogenomic Analysis of Ontological Data

(2010) K. M. Kim et al.   MOLECULAR BIOLOGY AND EVOLUTION

History of biological metal utilization inferred through phylogenomic analysis of protein structures

(2010) C. L. Dupont et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Darwinian Evolution of Prions in Cell Culture

(2010) J. Li et al.   SCIENCE

The Origin of Life

(2009) James Trefil et al.   AMERICAN SCIENTIST

Role of GTPases in Bacterial Ribosome Assembly

(2009) Robert A. Britton   Annual Review of Microbiology

The origin, evolution and structure of the protein world

(2009) Gustavo Caetano-Anollés et al.   BIOCHEMICAL JOURNAL

Genomic and structural aspects of protein evolution

(2009) Cyrus Chothia et al.   BIOCHEMICAL JOURNAL

Peptide-dominated membranes preceding the genetic takeover by RNA: latest thinking on a classic controversy

(2009) Richard Egel   BIOESSAYS

Protein domain organisation: adding order

(2009) Sarah K Kummerfeld et al.   BMC BIOINFORMATICS

Recent mechanistic insights into eukaryotic ribosomes

(2009) Marina V Rodnina et al.   CURRENT OPINION IN CELL BIOLOGY

Pseudo-Replication of [GADV]-Proteins and Origin of Life

(2009) Kenji Ikehara   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The Modern RNP World of Eukaryotes

(2009) L. J. Collins et al.   JOURNAL OF HEREDITY

Crystal Structures of the Human and Fungal Cytosolic Leucyl-tRNA Synthetase Editing Domains: A Structural Basis for the Rational Design of Antifungal Benzoxaboroles

(2009) Elena Seiradake et al.   JOURNAL OF MOLECULAR BIOLOGY

The Evolutionary History of the Structure of 5S Ribosomal RNA

(2009) Feng-Jie Sun et al.   JOURNAL OF MOLECULAR EVOLUTION

Working outside the protein-synthesis rules: insights into non-ribosomal peptide synthesis

(2009) Mohamed A. Marahiel   JOURNAL OF PEPTIDE SCIENCE

Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome

(2009) Rebecca M Voorhees et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

SAM-T08, HMM-based protein structure prediction

(2009) K. Karplus   NUCLEIC ACIDS RESEARCH

The Evolutionary History of Protein Domains Viewed by Species Phylogeny

(2009) Song Yang et al.   PLoS One

Nature of the protein universe

(2009) M. Levitt   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Target domain definition and classification in CASP8

(2009) Michael L. Tress et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

The Evolutionary Mechanics of Domain Organization in Proteomes and the Rise of Modularity in the Protein World

(2009) Minglei Wang et al.   STRUCTURE

Systematic comparison of SCOP and CATH: a new gold standard for protein structure analysis

(2009) Gergely Csaba et al.   BMC STRUCTURAL BIOLOGY

RNase P without RNA: Identification and Functional Reconstitution of the Human Mitochondrial tRNA Processing Enzyme

(2008) Johann Holzmann et al.   CELL

Evolutionary origins and directed evolution of RNA

(2008) Andrew D. Ellington et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

The origin and evolution of modern metabolism

(2008) Gustavo Caetano-Anollés et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Evolutionary Patterns in the Sequence and Structure of Transfer RNA: A Window into Early Translation and the Genetic Code

(2008) Feng-Jie Sun et al.   PLoS One

Development of tRNA synthetases and connection to genetic code and disease

(2008) Paul Schimmel   PROTEIN SCIENCE

Arrangements in the modular evolution of proteins

(2008) Andrew D. Moore et al.   TRENDS IN BIOCHEMICAL SCIENCES

Domain Tree-Based Analysis of Protein Architecture Evolution

(2007) K. Forslund et al.   MOLECULAR BIOLOGY AND EVOLUTION