Selective influences in the expressed immunoglobulin heavy and light chain gene repertoire in hairy cell leukemia

Background We previously reported ongoing mutational and isotype switch events in the immunoglobulin (Ig) heavy chain (H) locus in hairy cell leukemia. Those analyses raised questions on the incidence and type of selective influences occurring on the tumor B-cell receptor of hairy cell leukemia. Design and Methods To further investigate this issue, we examined the full IGH and kappa and lambda light chains (IG kappa and IG lambda) variable and constant region transcripts expressed in a large cohort of patients with hairy cell leukemia (n=88). Results Multiple IgH isotypes were expressed in 46/56 (82%) cases of hairy cell leukemia. Comparison of tumor with normal B-cell repertoires revealed preferential usage of IGHV3-21, IGHV3-30 and IGHV3-33 in hairy cell leukemia (p=0.001, p=0.003 and p=0.001, respectively). Light chain analysis demonstrated preferential Ig lambda use with an inverted IG kappa:IG lambda ratio (0.7:1) and universal usage of IGU3. Analysis of LCDR3 junctions revealed highly homologous motifs in 40% of IGL. Parallel analysis of IGH and IGL showed selective pairing of IGHV3-21/30/33 segments to specific LCDR3-13 subsets (3-0.008). Of 40 cases of hairy cell leukemia, 38 had mutated IGHV and/or/OM, with variations in 13/13 cloned cases, while two had 100% unmutated 1GHV and IGK/LV. Conclusions Overall, biased IGV usage, preference for Ig lambda with universal IGLJ3 usage and a high incidence of LCDR3 homologous motifs suggest selective influences on the B-cell receptor of hairy cell leukemia. Ongoing mutations and isotype switching suggest that influences occur on the tumor B-cell receptor at ectopic sites.