Coupled reductive and oxidative sulfur cycling in the phototrophic plate of a meromictic lake

CO2assimilation in the chemocline of Lake Cadagno is dominated by a few types of phototrophic purple sulfur bacteria

(2013) Nicola Storelli et al.   FEMS MICROBIOLOGY ECOLOGY

Contrasting Patterns of Community Assembly in the Stratified Water Column of Great Salt Lake, Utah

(2013) Jonathan E. Meuser et al.   MICROBIAL ECOLOGY

Sulfite oxidation in the purple sulfur bacterium Allochromatium vinosum: identification of SoeABC as a major player and relevance of SoxYZ in the process

(2013) Christiane Dahl et al.   MICROBIOLOGY-SGM

Influence of sulfate reduction rates on the Phanerozoic sulfur isotope record

(2013) W. D. Leavitt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sulfur isotopes in coal constrain the evolution of the Phanerozoic sulfur cycle

(2013) D. E. Canfield   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proterozoic ocean redox and biogeochemical stasis

(2013) C. T. Reinhard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling

(2013) Laura A Hug et al.   Microbiome

Unifying concepts in anaerobic respiration: Insights from dissimilatory sulfur metabolism

(2012) Fabian Grein et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Diversity and evolution of bioenergetic systems involved in microbial nitrogen compound transformations

(2012) Jörg Simon et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

(2012) Y. Peng et al.   BIOINFORMATICS

Microbial diversity under extreme euxinia: Mahoney Lake, Canada

(2012) V. KLEPAC-CERAJ et al.   Geobiology

Cyanobacterial life at low O2: community genomics and function reveal metabolic versatility and extremely low diversity in a Great Lakes sinkhole mat

(2012) A. A. VOORHIES et al.   Geobiology

Biostimulation induces syntrophic interactions that impact C, S and N cycling in a sediment microbial community

(2012) Kim M Handley et al.   ISME Journal

Fine scale analysis of shifts in bacterial community structure in the chemocline of meromictic Lake Cadagno, Switzerland

(2012) Paola M.A. DECRISTOPHORIS et al.   JOURNAL OF LIMNOLOGY

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics

(2012) M. Lohse et al.   NUCLEIC ACIDS RESEARCH

Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla

(2012) K. C. Wrighton et al.   SCIENCE

Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota

(2012) V. Iverson et al.   SCIENCE

Candidatus “Thiodictyon syntrophicum”, sp. nov., a new purple sulfur bacterium isolated from the chemocline of Lake Cadagno forming aggregates and specific associations with Desulfocapsa sp.

(2012) Sandro Peduzzi et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Integrative analysis of environmental sequences using MEGAN4

(2011) D. H. Huson et al.   GENOME RESEARCH

Biosynthesis of the biomarker okenone: χ-ring formation

(2011) K. VOGL et al.   Geobiology

Carotenoid biomarkers as an imperfect reflection of the anoxygenic phototrophic community in meromictic Fayetteville Green Lake

(2011) K. M. MEYER et al.   Geobiology

Community genomic analysis of an extremely acidophilic sulfur-oxidizing biofilm

(2011) Daniel S Jones et al.   ISME Journal

Elucidation of the Biosynthetic Pathway for Okenone inThiodictyonsp. CAD16 Leads to the Discovery of Two Novel Carotene Ketolases

(2011) Kajetan Vogl et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Sulfur globule oxidation in green sulfur bacteria is dependent on the dissimilatory sulfite reductase system

(2011) C. Holkenbrink et al.   MICROBIOLOGY-SGM

Mechanisms and Evolution of Oxidative Sulfur Metabolism in Green Sulfur Bacteria

(2011) Lea H. Gregersen et al.   Frontiers in Microbiology

A Comparative Genomic Analysis of Energy Metabolism in Sulfate Reducing Bacteria and Archaea

(2011) Inês A. Cardoso Pereira et al.   Frontiers in Microbiology

EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing data

(2011) Christopher S Miller et al.   GENOME BIOLOGY

Biochemistry, evolution and physiological function of the Rnf complex, a novel ion-motive electron transport complex in prokaryotes

(2010) Eva Biegel et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Sulfur cycling in a stratified euxinic lake with moderately high sulfate: Constraints from quadruple S isotopes

(2010) Aubrey L. Zerkle et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Biochemical Characterization of Individual Components of the Allochromatium vinosum DsrMKJOP Transmembrane Complex Aids Understanding of Complex Function In Vivo

(2010) F. Grein et al.   JOURNAL OF BACTERIOLOGY

A Cryptic Sulfur Cycle in Oxygen-Minimum-Zone Waters off the Chilean Coast

(2010) D. E. Canfield et al.   SCIENCE

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Dominance of a clonal green sulfur bacterial population in a stratified lake

(2009) Lea H. Gregersen et al.   FEMS MICROBIOLOGY ECOLOGY

Anoxygenic photosynthesis modulated Proterozoic oxygen and sustained Earth's middle age

(2009) D. T. Johnston et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Community-wide analysis of microbial genome sequence signatures

(2009) Gregory J Dick et al.   GENOME BIOLOGY

Oceanic Euxinia in Earth History: Causes and Consequences

(2008) Katja M. Meyer et al.   Annual Review of Earth and Planetary Sciences

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

SoxAX Binding Protein, a Novel Component of the Thiosulfate-Oxidizing Multienzyme System in the Green Sulfur Bacterium Chlorobium tepidum

(2008) T. Ogawa et al.   JOURNAL OF BACTERIOLOGY

The Crystal Structure ofDesulfovibrio vulgarisDissimilatory Sulfite Reductase Bound to DsrC Provides Novel Insights into the Mechanism of Sulfate Respiration

(2008) Tânia F. Oliveira et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structural and Molecular Genetic Insight into a Widespread Sulfur Oxidation Pathway

(2008) Christiane Dahl et al.   JOURNAL OF MOLECULAR BIOLOGY

Microbiological disproportionation of inorganic sulfur compounds

(2008) Kai Finster   Journal of Sulfur Chemistry

A simple, fast, and accurate method of phylogenomic inference

(2008) Martin Wu et al.   GENOME BIOLOGY

Okenane, a biomarker for purple sulfur bacteria (Chromatiaceae), and other new carotenoid derivatives from the 1640Ma Barney Creek Formation

(2007) Jochen J. Brocks et al.   GEOCHIMICA ET COSMOCHIMICA ACTA