Effects of introgression on the genetic population structure of two ecologically and economically important conifer species: lodgepole pine (Pinus contorta var. latifolia) and jack pine (Pinus banksiana)

Implementing a Class of Permutation Tests: ThecoinPackage

(2015) Torsten Hothorn et al.   Journal of Statistical Software

Are adaptive loci transferable across genomes of related species? Outlier and environmental association analyses in Alpine Brassicaceae species

(2013) Deborah Zulliger et al.   MOLECULAR ECOLOGY

Temperature-driven range expansion of an irruptive insect heightened by weakly coevolved plant defenses

(2013) K. F. Raffa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A species-diagnostic SNP panel for discriminating lodgepole pine, jack pine, and their interspecific hybrids

(2013) C. I. Cullingham et al.   Tree Genetics & Genomes

Long-distance gene flow and adaptation of forest trees to rapid climate change

(2012) Antoine Kremer et al.   ECOLOGY LETTERS

Characterizing the physical and genetic structure of the lodgepole pine × jack pine hybrid zone: mosaic structure and differential introgression

(2012) Catherine I. Cullingham et al.   Evolutionary Applications

Differential introgression from a sister species explains highFSToutlier loci within a mussel species

(2012) C. C. Gosset et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Spatial genetic structure of the mountain pine beetle (Dendroctonus ponderosae) outbreak in western Canada: historical patterns and contemporary dispersal

(2012) G. D. N. GAYATHRI SAMARASEKERA et al.   MOLECULAR ECOLOGY

Rates of assay success and genotyping error when single nucleotide polymorphism genotyping in non-model organisms: a case study in the Antarctic fur seal

(2012) J. I. HOFFMAN et al.   Molecular Ecology Resources

Differential introgression reveals candidate genes for selection across a spruce (Picea sitchensis × P. glauca) hybrid zone

(2012) Jill A. Hamilton et al.   NEW PHYTOLOGIST

adegenet 1.3-1: new tools for the analysis of genome-wide SNP data

(2011) Thibaut Jombart et al.   BIOINFORMATICS

Potential for range expansion of mountain pine beetle into the boreal forest of North America

(2011) L. Safranyik et al.   CANADIAN ENTOMOLOGIST

Exploring giant plant genomes with next-generation sequencing technology

(2011) Laura J. Kelly et al.   CHROMOSOME RESEARCH

Mapping forest composition from the Canadian National Forest Inventory and land cover classification maps

(2011) Denys Yemshanov et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

WITHIN-POPULATION STRUCTURE HIGHLIGHTED BY DIFFERENTIAL INTROGRESSION ACROSS SEMIPERMEABLE BARRIERS TO GENE FLOW IN ANGUILLA MARMORATA

(2011) Pierre-Alexandre Gagnaire et al.   EVOLUTION

Effect of Water Stress and Fungal Inoculation on Monoterpene Emission from an Historical and a New Pine Host of the Mountain Pine Beetle

(2011) Inka Lusebrink et al.   JOURNAL OF CHEMICAL ECOLOGY

Mountain pine beetle host-range expansion threatens the boreal forest

(2011) CATHERINE I. CULLINGHAM et al.   MOLECULAR ECOLOGY

Comparison ofFSToutlier tests for SNP loci under selection

(2011) SHAWN R. NARUM et al.   Molecular Ecology Resources

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Climate Change and Bark Beetles of the Western United States and Canada: Direct and Indirect Effects

(2010) Barbara J. Bentz et al.   BIOSCIENCE

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Applications of next generation sequencing in molecular ecology of non-model organisms

(2010) R Ekblom et al.   HEREDITY

Climate change and range expansion of an aggressive bark beetle: evidence of higher beetle reproduction in naïve host tree populations

(2010) Timothy J. Cudmore et al.   JOURNAL OF APPLIED ECOLOGY

Admixture facilitates adaptation from standing variation in the European aspen (Populus tremulaL.), a widespread forest tree

(2010) DULCINEIA DE CARVALHO et al.   MOLECULAR ECOLOGY

Multilocus species identification and fungal DNA barcoding: insights from blue stain fungal symbionts of the mountain pine beetle

(2010) AMANDA D. ROE et al.   Molecular Ecology Resources

In Vitro vs In Silico Detected SNPs for the Development of a Genotyping Array: What Can We Learn from a Non-Model Species?

(2010) Camille Lepoittevin et al.   PLoS One

Between-Population Outbreeding Affects Plant Defence

(2010) Roosa Leimu et al.   PLoS One

introgress: a software package for mapping components of isolation in hybrids

(2009) ZACHARIAH GOMPERT et al.   Molecular Ecology Resources

fdrtool: a versatile R package for estimating local and tail area-based false discovery rates

(2008) K. Strimmer   BIOINFORMATICS

Cross-scale Drivers of Natural Disturbances Prone to Anthropogenic Amplification: The Dynamics of Bark Beetle Eruptions

(2008) Kenneth F. Raffa et al.   BIOSCIENCE

Enhancing genetic mapping of complex genomes through the design of highly-multiplexed SNP arrays: application to the large and unsequenced genomes of white spruce and black spruce

(2008) Nathalie Pavy et al.   BMC GENOMICS

Adaptation, migration or extirpation: climate change outcomes for tree populations

(2008) Sally N. Aitken et al.   Evolutionary Applications

Glacial vicariance in the Pacific Northwest: evidence from a lodgepole pine mitochondrial DNA minisatellite for multiple genetically distinct and widely separated refugia

(2008) JULIE GODBOUT et al.   MOLECULAR ECOLOGY

High-throughput genotyping with the GoldenGate assay in the complex genome of soybean

(2008) David L. Hyten et al.   THEORETICAL AND APPLIED GENETICS

High-throughput genotyping and mapping of single nucleotide polymorphisms in loblolly pine (Pinus taeda L.)

(2008) Andrew J. Eckert et al.   Tree Genetics & Genomes

genepop’007: a complete re-implementation of the genepop software for Windows and Linux

(2007) FRANÇOIS ROUSSET   Molecular Ecology Resources