NovelPRKDgene rearrangements and variant fusions in cribriform adenocarcinoma of salivary gland origin

An Integrative CGH, MSI and Candidate Genes Methylation Analysis of Colorectal Tumors

(2014) Hassan Brim et al.   PLoS One

DDX3 regulates DNA damage-induced apoptosis and p53 stabilization

(2013) Mianen Sun et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Protein kinase D1 mRNA level may predict cancer-specific survival in heavy smokers with esophageal squamous cell cancers

(2013) X. Xie et al.   DISEASES OF THE ESOPHAGUS

Novel MIR143-NOTCH fusions in benign and malignant glomus tumors

(2013) Juan-Miguel Mosquera et al.   GENES CHROMOSOMES & CANCER

NovelYAP1-TFE3fusion defines a distinct subset of epithelioid hemangioendothelioma

(2013) Cristina R. Antonescu et al.   GENES CHROMOSOMES & CANCER

Identification and Validation of a Multigene Predictor of Recurrence in Primary Laryngeal Cancer

(2013) Elena Fountzilas et al.   PLoS One

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Dissecting the genomic complexity underlying medulloblastoma

(2012) David T. W. Jones et al.   NATURE

Cribriform Adenocarcinoma of Minor Salivary Gland Origin Principally Affecting the Tongue

(2011) Alena Skalova et al.   AMERICAN JOURNAL OF SURGICAL PATHOLOGY

EWSR1-ATF1 fusion is a novel and consistent finding in hyalinizing clear-cell carcinoma of salivary gland

(2011) Cristina R. Antonescu et al.   GENES CHROMOSOMES & CANCER

Polymorphous Low-Grade Adenocarcinoma

(2010) Raja R. Seethala et al.   ARCHIVES OF OTOLARYNGOLOGY-HEAD & NECK SURGERY

RSEQtools: a modular framework to analyze RNA-Seq data using compact, anonymized data summaries

(2010) Lukas Habegger et al.   BIOINFORMATICS

EWSR1-POU5F1 fusion in soft tissue myoepithelial tumors. A molecular analysis of sixty-six cases, including soft tissue, bone, and visceral lesions, showing common involvement of the EWSR1 gene

(2010) Cristina R. Antonescu et al.   GENES CHROMOSOMES & CANCER

ARID1AMutations in Endometriosis-Associated Ovarian Carcinomas

(2010) Kimberly C. Wiegand et al.   NEW ENGLAND JOURNAL OF MEDICINE

FusionSeq: a modular framework for finding gene fusions by analyzing Paired-End RNA-Sequencing data

(2010) Andrea Sboner et al.   GENOME BIOLOGY

Recurrent fusion of MYB and NFIB transcription factor genes in carcinomas of the breast and head and neck

(2009) M. Persson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A large genome center's improvements to the Illumina sequencing system

(2008) Michael A Quail et al.   NATURE METHODS

Oncogenic role of DDX3 in breast cancer biogenesis

(2008) M Botlagunta et al.   ONCOGENE