Genome-scale profiling reveals a subset of genes regulated by DNA methylation that program somatic T-cell phenotypes in humans

T-cell activation genes differentially expressed at birth in CD4+ T-cells from children who develop IgE food allergy

(2011) D. J. Martino et al.   ALLERGY

Epigenetics and Prenatal Influences on Asthma and Allergic Airways Disease

(2011) David Martino et al.   CHEST

Human Th1 and Th17 Cells Exhibit Epigenetic Stability at Signature Cytokine and Transcription Factor Loci

(2011) C. J. Cohen et al.   JOURNAL OF IMMUNOLOGY

Repression of the genome organizer SATB1 in regulatory T cells is required for suppressive function and inhibition of effector differentiation

(2011) Marc Beyer et al.   NATURE IMMUNOLOGY

Recent thymic emigrants are biased against the T-helper type 1 and toward the T-helper type 2 effector lineage

(2010) D. W. Hendricks et al.   BLOOD

Environmental epigenetics and allergic diseases: recent advances

(2010) J. S. Kuriakose et al.   CLINICAL AND EXPERIMENTAL ALLERGY

Epigenomics of T cell activation, differentiation, and memory

(2010) Suresh Cuddapah et al.   CURRENT OPINION IN IMMUNOLOGY

DNA methylome in human CD4+ T cells identifies transcriptionally repressive and non-repressive methylation peaks

(2010) T Hughes et al.   GENES AND IMMUNITY

Comparison of anti-CD3 and anti-CD28-coated beads with soluble anti-CD3 for expanding human T cells: Differing impact on CD8 T cell phenotype and responsiveness to restimulation

(2010) Yixin Li et al.   Journal of Translational Medicine

Effector T cell plasticity: flexibility in the face of changing circumstances

(2010) Kenneth M Murphy et al.   NATURE IMMUNOLOGY

Mechanisms Underlying Lineage Commitment and Plasticity of Helper CD4+ T Cells

(2010) J. J. O'Shea et al.   SCIENCE

Microbial exposure, interferon gamma gene demethylation in naïve T-cells, and the risk of allergic disease

(2009) P. J. Vuillermin et al.   ALLERGY

Plasticity of CD4+ T Cell Lineage Differentiation

(2009) Liang Zhou et al.   IMMUNITY

Human CD4+T cell recent thymic emigrants are identified by protein tyrosine kinase 7 and have reduced immune function

(2009) Christopher J. Haines et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts

(2009) Akiko Doi et al.   NATURE GENETICS

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

(2009) Rafael A Irizarry et al.   NATURE GENETICS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Neonatal immunity: faulty T-helpers and the shortcomings of dendritic cells

(2009) Habib Zaghouani et al.   TRENDS IN IMMUNOLOGY

Bisulfite-based epityping on pooled genomic DNA provides an accurate estimate of average group DNA methylation

(2009) Sophia J Docherty et al.   Epigenetics & Chromatin

At the crossroads of T helper lineage commitment—Epigenetics points the way

(2008) Peter C.J. Janson et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

lumi: a pipeline for processing Illumina microarray

(2008) P. Du et al.   BIOINFORMATICS