Marker utility of transposable elements for plant genetics, breeding, and ecology: a review

A new active CACTA element and transposition activity in ecotype differentiation of Arabidopsis

(2013) Kyong-Cheul Park et al.   Genes & Genomics

Transposable elements and microevolutionary changes in natural populations

(2013) Georgi Bonchev et al.   Molecular Ecology Resources

Advances in plant gene-targeted and functional markers: a review

(2013) Péter Poczai et al.   Plant Methods

Mobile element biology: new possibilities with high-throughput sequencing

(2013) Jinchuan Xing et al.   TRENDS IN GENETICS

Development of cultivar-specific DNA markers based on retrotransposon-based insertional polymorphism in Japanese pear

(2012) Hoytaek Kim et al.   BREEDING SCIENCE

CACTA transposon-derived Ti-SCARs for cultivar fingerprinting in rapeseed

(2012) Sung-Il Lee et al.   Genes & Genomics

Exploring giant plant genomes with next-generation sequencing technology

(2011) Laura J. Kelly et al.   CHROMOSOME RESEARCH

The genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis

(2010) Runchun Jing et al.   BMC EVOLUTIONARY BIOLOGY

Analysis of plant diversity with retrotransposon-based molecular markers

(2010) R Kalendar et al.   HEREDITY

Mobilization of retrotransposons in synthetic allotetraploid tobacco

(2010) M. Petit et al.   NEW PHYTOLOGIST

Insertion site-based polymorphism markers open new perspectives for genome saturation and marker-assisted selection in wheat

(2010) Etienne Paux et al.   PLANT BIOTECHNOLOGY JOURNAL

Polymorphism of a new Ty1-copia retrotransposon in durum wheat under salt and light stresses

(2010) Pasqualina Woodrow et al.   THEORETICAL AND APPLIED GENETICS

Transposable elements: powerful facilitators of evolution

(2009) Keith R. Oliver et al.   BIOESSAYS

SNP identification in crop plants

(2009) Martin W Ganal et al.   CURRENT OPINION IN PLANT BIOLOGY

High Potential of a Transposon mPing as a Marker System in japonica x japonica Cross in Rice

(2009) Y. Monden et al.   DNA RESEARCH

Simple Sequence Repeat Polymorphisms (SSRPs) for Evaluation of Molecular Diversity and Germplasm Classification of Minor Crops

(2009) Yong-Jin Park et al.   MOLECULES

Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina

(2009) Christian Parisod et al.   NEW PHYTOLOGIST

Next-generation sequencing technologies and their implications for crop genetics and breeding

(2009) Rajeev K. Varshney et al.   TRENDS IN BIOTECHNOLOGY

Large-Scale Discovery of Gene-Enriched SNPs

(2009) Michael A. Gore et al.   Plant Genome

Characterization of ten novel Ty1 copia-like retrotransposon families of the grapevine genome

(2008) Cedric Moisy et al.   BMC GENOMICS

Development of a set of SNP markers present in expressed genes of the apple

(2008) David Chagné et al.   GENOMICS

Genome-Wide Analysis of Transposon Insertion Polymorphisms Reveals Intraspecific Variation in Cultivated Rice

(2008) X. Huang et al.   PLANT PHYSIOLOGY

Demography and weak selection drive patterns of transposable element diversity in natural populations of Arabidopsis lyrata

(2008) S. Lockton et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA