A novel DCL2-dependent miRNA pathway in tomato affects susceptibility to RNA viruses

Function identification of miR482b, a negative regulator during tomato resistance to Phytophthora infestans

(2018) Ning Jiang et al.   Horticulture Research

Down-regulation of genes coding for core RNAi components and disease resistance proteins via corresponding microRNAs might be correlated with successful Soybean mosaic virus infection in soybean

(2017) Duran Bao et al.   MOLECULAR PLANT PATHOLOGY

DCL2- and RDR6-dependent transitive silencing of SMXL4 and SMXL5 in Arabidopsis dcl4 mutants causes defective phloem transport and carbohydrate over-accumulation

(2017) Yu-Yi Wu et al.   PLANT JOURNAL

Identification and validation of a virus-inducible ta-siRNA-generating TAS4 locus in tomato

(2016) Archana Singh et al.   JOURNAL OF BIOSCIENCES

DNA Methylation Signatures of the Plant Chromomethyltransferases

(2016) Quentin Gouil et al.   PLoS Genetics

miRNAs trigger widespread epigenetically activated siRNAs from transposons in Arabidopsis

(2014) Kate M. Creasey et al.   NATURE

Respective contributions of Arabidopsis DCL2 and DCL4 to RNA silencing

(2014) Jean-Sébastien Parent et al.   PLANT JOURNAL

Dynamic regulation of genome-wide pre-mRNA splicing and stress tolerance by the Sm-like protein LSm5 in Arabidopsis

(2014) Peng Cui et al.   GENOME BIOLOGY

Global and local perturbation of the tomato microRNA pathway by atrans-activatedDICER-LIKE 1mutant

(2013) Michael Kravchik et al.   JOURNAL OF EXPERIMENTAL BOTANY

Distinct substrate specificities of Arabidopsis DCL3 and DCL4

(2013) Hideaki Nagano et al.   NUCLEIC ACIDS RESEARCH

Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs

(2013) K. Rogers et al.   PLANT CELL

The Initiation of Epigenetic Silencing of Active Transposable Elements Is Triggered by RDR6 and 21-22 Nucleotide Small Interfering RNAs

(2013) S. Nuthikattu et al.   PLANT PHYSIOLOGY

Stepwise artificial evolution of a plant disease resistance gene

(2013) C. J. Harris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide identification of Dicer-like, Argonaute and RNA-dependent RNA polymerase gene families and their expression analyses in response to viral infection and abiotic stresses in Solanum lycopersicum

(2012) Miao Bai et al.   GENE

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

A Nitrate Transporter for Both Roots and Shoots

(2012) G. Bertoni   PLANT CELL

A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs

(2012) P. V. Shivaprasad et al.   PLANT CELL

Identifying small interfering RNA loci from high-throughput sequencing data

(2011) Thomas J. Hardcastle et al.   BIOINFORMATICS

MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs

(2011) J. Zhai et al.   GENES & DEVELOPMENT

An Antiviral Defense Role of AGO2 in Plants

(2011) Jagger J. W. Harvey et al.   PLoS One

Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis

(2010) Josh T Cuperus et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

22-nucleotide RNAs trigger secondary siRNA biogenesis in plants

(2010) H.-M. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Clusters and superclusters of phased small RNAs in the developing inflorescence of rice

(2009) C. Johnson et al.   GENOME RESEARCH

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

DICER-LIKE2 Plays a Primary Role in Transitive Silencing of Transgenes in Arabidopsis

(2008) Sizolwenkosi Mlotshwa et al.   PLoS One