Root-associated fungi of Arabidopsis thaliana and Microthlaspi perfoliatum

Arabidopsis thaliana model system reveals a continuum of responses to root endophyte colonization

(2013) Keerthi G. Mandyam et al.   Fungal Biology

Endophytes versus biotrophic and necrotrophic pathogens—are fungal lifestyles evolutionarily stable traits?

(2013) Luis Delaye et al.   FUNGAL DIVERSITY

Factors shaping community structure of endophytic fungi–evidence from the Pinus-Viscum-system

(2013) Derek Peršoh   FUNGAL DIVERSITY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Enigmatic Sebacinales

(2013) Franz Oberwinkler et al.   MYCOLOGICAL PROGRESS

The endophytic mycobiota of Arabidopsis thaliana

(2012) Elena García et al.   FUNGAL DIVERSITY

A fine line – endophytes or pathogens in Arabidopsis thaliana

(2012) Corina Junker et al.   Fungal Ecology

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Hidden Fungi, Emergent Properties: Endophytes and Microbiomes

(2011) Andrea Porras-Alfaro et al.   Annual Review of Phytopathology

Fungal endophytes: unique plant inhabitants with great promises

(2011) Amal Hassan Aly et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

From morphology to molecular biology: can we use sequence data to identify fungal endophytes?

(2011) Thida Win Ko Ko et al.   FUNGAL DIVERSITY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Soil fungal isolates produce different organic acid patterns involved in phosphate salts solubilization

(2010) Jose Martin Scervino et al.   BIOLOGY AND FERTILITY OF SOILS

Gibberellin production and plant growth promotion from pure cultures of Cladosporium sp. MH-6 isolated from cucumber (Cucumis sativus L.)

(2010) Muhammad Hamayun et al.   MYCOLOGIA

Twenty-First Century Plant Biology: Impacts of the Arabidopsis Genome on Plant Biology and Agriculture

(2010) C. R. Buell et al.   PLANT PHYSIOLOGY

Closing the gaps: phylogenetic relationships in the Brassicaceae based on DNA sequence data of nuclear ribosomal ITS region

(2010) Suzanne I. Warwick et al.   PLANT SYSTEMATICS AND EVOLUTION

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Pathogenesis, parasitism and mutualism in the trophic space of microbe–plant interactions

(2010) Adrian C. Newton et al.   TRENDS IN MICROBIOLOGY

Efficacy of chemical and fluorescent protein markers in studying plant colonization by endophytic non-pathogenic Fusarium oxysporum isolates

(2009) Pamela Paparu et al.   BIOCONTROL

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Exogenous glucosinolate produced by Arabidopsis thaliana has an impact on microbes in the rhizosphere and plant roots

(2009) Mélanie Bressan et al.   ISME Journal

Fungal endophytes: diversity and functional roles

(2009) R. J. Rodriguez et al.   NEW PHYTOLOGIST

Growth promotion of cucumber by pure cultures of gibberellin-producing Phoma sp. GAH7

(2009) Muhammad Hamayun et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Do Sebacinales commonly associate with plant roots as endophytes?

(2009) Marc-André Selosse et al.  

Recent developments in the MAFFT multiple sequence alignment program

(2008) K. Katoh et al.   BRIEFINGS IN BIOINFORMATICS

Fungal root endophytes from natural vegetation in Mediterranean environments with special reference to Fusarium spp

(2008) Jose G. Maciá-Vicente et al.   FEMS MICROBIOLOGY ECOLOGY

Stress tolerance in plants via habitat-adapted symbiosis

(2008) Rusty J Rodriguez et al.   ISME Journal

Systemic Resistance in Arabidopsis Conferred by the Mycorrhizal Fungus Piriformospora indica Requires Jasmonic Acid Signaling and the Cytoplasmic Function of NPR1

(2008) Elke Stein et al.   PLANT AND CELL PHYSIOLOGY