Gene loss in the fungal canola pathogen Leptosphaeria maculans

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(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Rapid evolution of avirulence genes in rice blast fungus Magnaporthe oryzae

(2014) Ju Huang et al.   BMC GENETICS

Identifying genetic diversity of avirulence genes in Leptosphaeria maculans using whole genome sequencing

(2013) Manuel Zander et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Genome-wide patterns of large-size presence/absence variants in sorghum

(2013) Li-Min Zhang et al.   Journal of Integrative Plant Biology

Global diversity and distribution of three necrotrophic effectors inPhaeosphaeria nodorumand related species

(2013) Megan C. McDonald et al.   NEW PHYTOLOGIST

Resequencing and Comparative Genomics of Stagonospora nodorum : Sectional Gene Absence and Effector Discovery

(2013) Robert Andrew Syme et al.   G3-Genes Genomes Genetics

Variation of presence/absence genes among Arabidopsis populations

(2012) Shengjun Tan et al.   BMC EVOLUTIONARY BIOLOGY

Proto-genes and de novo gene birth

(2012) Anne-Ruxandra Carvunis et al.   NATURE

Genomic tillage and the harvest of fungal phytopathogens

(2012) Richard Oliver   NEW PHYTOLOGIST

Molecular mapping of qualitative and quantitative loci for resistance to Leptosphaeria maculans causing blackleg disease in canola (Brassica napus L.)

(2012) Rosy Raman et al.   THEORETICAL AND APPLIED GENETICS

ggbio: an R package for extending the grammar of graphics for genomic data

(2012) Tengfei Yin et al.   GENOME BIOLOGY

Genome Evolution: Horizontal Movements in the Fungi

(2011) Thomas A. Richards   CURRENT BIOLOGY

Mapping copy number variation by population-scale genome sequencing

(2011) Ryan E. Mills et al.   NATURE

The evolutionary origin of orphan genes

(2011) Diethard Tautz et al.   NATURE REVIEWS GENETICS

Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations

(2011) Thierry Rouxel et al.   Nature Communications

Genome-wide patterns of genetic variation in sweet and grain sorghum (Sorghum bicolor)

(2011) Lei-Ying Zheng et al.   GENOME BIOLOGY

Cytochrome P450 enzymes in the fungal kingdom

(2010) B. Črešnar et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

(2010) Li-Jun Ma et al.   NATURE

Evolution of Linked Avirulence Effectors in Leptosphaeria maculans Is Affected by Genomic Environment and Exposure to Resistance Genes in Host Plants

(2010) Angela P. Van de Wouw et al.   PLoS Pathogens

Transposable elements: powerful facilitators of evolution

(2009) Keith R. Oliver et al.   BIOESSAYS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Repeat-Induced Point Mutation (RIP) as an Alternative Mechanism of Evolution Toward Virulence inLeptosphaeria maculans

(2009) Isabelle Fudal et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Fungal cytochrome P450 database

(2008) Jongsun Park et al.   BMC GENOMICS

Genome Annotation in Plants and Fungi: EuGene as a Model Platform

(2008) Sylvain Foissac et al.   Current Bioinformatics

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Horizontal gene transfer in eukaryotic evolution

(2008) Patrick J. Keeling et al.   NATURE REVIEWS GENETICS