Spatial heterogeneity of eukaryotic microbial communities in an unstudied geothermal diatomaceous biological soil crust: Yellowstone National Park, WY, USA

The generation and maintenance of diversity in microbial communities

(2011) Noah Fierer et al.   AMERICAN JOURNAL OF BOTANY

Soil-specific limitations for access and analysis of soil microbial communities by metagenomics

(2011) Nathalie Lombard et al.   FEMS MICROBIOLOGY ECOLOGY

Reproducibility and quantitation of amplicon sequencing-based detection

(2011) Jizhong Zhou et al.   ISME Journal

Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness

(2011) Virginia Edgcomb et al.   ISME Journal

A preliminary survey of lichen associated eukaryotes using pyrosequencing

(2011) Scott T. BATES et al.   LICHENOLOGIST

Evidence of High Microbial Abundance and Spatial Dependency in Three Arctic Soil Ecosystems

(2011) Samiran Banerjee et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Bacterial Communities Associated with the Lichen Symbiosis

(2010) Scott T. Bates et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Replicate or lie

(2010) James I. Prosser   ENVIRONMENTAL MICROBIOLOGY

Ecological assessment of estuarine sediments by pyrosequencing eukaryotic ribosomal DNA

(2010) Anthony A Chariton et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA

(2010) Jon Bråte et al.   ISME Journal

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Quantifying microbial communities with 454 pyrosequencing: does read abundance count?

(2010) ANTHONY S. AMEND et al.   MOLECULAR ECOLOGY

Microbial community resemblance methods differ in their ability to detect biologically relevant patterns

(2010) Justin Kuczynski et al.   NATURE METHODS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Global patterns in belowground communities

(2009) Noah Fierer et al.   ECOLOGY LETTERS

A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes

(2009) Linda A. Amaral-Zettler et al.   PLoS One

Biological crusts as a model system for examining the biodiversity–ecosystem function relationship in soils

(2009) Matthew A. Bowker et al.   SOIL BIOLOGY & BIOCHEMISTRY

Development of a Denaturing High-Performance Liquid Chromatography Method for Detection of Protist Parasites of Metazoans

(2008) C. Troedsson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Geothermal diatoms: a comparative study of floras in hot spring systems of Iceland, New Zealand, and Kenya

(2008) R. Bernhart Owen et al.   HYDROBIOLOGIA