Computational analysis of T cell receptor signaling and ligand discrimination - Past, present, and future

T Cell Activation

(2009) Jennifer E. Smith-Garvin et al.   Annual Review of Immunology

Functional Anatomy of T Cell Activation and Synapse Formation

(2009) David R. Fooksman et al.   Annual Review of Immunology

Digital Signaling and Hysteresis Characterize Ras Activation in Lymphoid Cells

(2009) Jayajit Das et al.   CELL

The Mitogen-Activated Protein Kinase Scaffold KSR1 Is Required for Recruitment of Extracellular Signal-Regulated Kinase to the Immunological Synapse

(2009) E. Giurisato et al.   MOLECULAR AND CELLULAR BIOLOGY

Quantifying cellular interaction dynamics in 3D fluorescence microscopy data

(2009) Frederick Klauschen et al.   Nature Protocols

Computational reconstruction of cell and tissue surfaces for modeling and data analysis

(2009) Frederick Klauschen et al.   Nature Protocols

Multiscale modeling for biologists

(2009) Martin Meier-Schellersheim et al.   Wiley Interdisciplinary Reviews-Systems Biology and Medicine

The APEX Quantitative Proteomics Tool: Generating protein quantitation estimates from LC-MS/MS proteomics results

(2008) John C Braisted et al.   BMC BIOINFORMATICS

The Balance between T Cell Receptor Signaling and Degradation at the Center of the Immunological Synapse Is Determined by Antigen Quality

(2008) Sašo Čemerski et al.   IMMUNITY

Making friends in out-of-the-way places: how cells of the immune system get together and how they conduct their business as revealed by intravital imaging

(2008) Ronald N. Germain et al.   IMMUNOLOGICAL REVIEWS

Mass Spectrometry Based Targeted Protein Quantification: Methods and Applications

(2008) Sheng Pan et al.   JOURNAL OF PROTEOME RESEARCH

SAP-controlled T–B cell interactions underlie germinal centre formation

(2008) Hai Qi et al.   NATURE

Next-generation high-density self-assembling functional protein arrays

(2008) Niroshan Ramachandran et al.   NATURE METHODS

Variability and Robustness in T Cell Activation from Regulated Heterogeneity in Protein Levels

(2008) O. Feinerman et al.   SCIENCE

TCR Triggering by the pMHC Complex: Valency, Affinity, and Dynamics

(2008) R. Varma   Science Signaling

Quantitative challenges in understanding ligand discrimination by αβ T cells

(2007) Ofer Feinerman et al.   MOLECULAR IMMUNOLOGY