Changes in the faecal microbiota of mares precede the development ofpost partumcolic

Characterisation of the Faecal Bacterial Community in Adult and Elderly Horses Fed a High Fibre, High Oil or High Starch Diet Using 454 Pyrosequencing

(2014) Kirsty Dougal et al.   PLoS One

Stability of the Maternal Gut Microbiota During Late Pregnancy and Early Lactation

(2013) Ted Jost et al.   CURRENT MICROBIOLOGY

Intestinal Dysbiosis and Depletion of Butyrogenic Bacteria in Clostridium difficile Infection and Nosocomial Diarrhea

(2013) V. C. Antharam et al.   JOURNAL OF CLINICAL MICROBIOLOGY

The core faecal bacterial microbiome of Irish Thoroughbred racehorses

(2013) M.M. O' Donnell et al.   LETTERS IN APPLIED MICROBIOLOGY

Intestinal Microbiota of Infants With Colic: Development and Specific Signatures

(2013) C. de Weerth et al.   PEDIATRICS

Illumina sequencing of the V4 hypervariable region 16S rRNA gene reveals extensive changes in bacterial communities in the cecum following carbohydrate oral infusion and development of early-stage acute laminitis in the horse

(2013) Michael M. Moreau et al.   VETERINARY MICROBIOLOGY

Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis

(2012) Samantha M Steelman et al.   BMC Veterinary Research

Host Remodeling of the Gut Microbiome and Metabolic Changes during Pregnancy

(2012) Omry Koren et al.   CELL

Risk factors for large colon volvulus in the UK

(2012) J. M. Suthers et al.   EQUINE VETERINARY JOURNAL

A comparison of the microbiome and the metabolome of different regions of the equine hindgut

(2012) Kirsty Dougal et al.   FEMS MICROBIOLOGY ECOLOGY

Suppression of Clostridium difficile in the Gastrointestinal Tracts of Germfree Mice Inoculated with a Murine Isolate from the Family Lachnospiraceae

(2012) Angela E. Reeves et al.   INFECTION AND IMMUNITY

Microbial Dysbiosis in Pediatric Patients with Crohn's Disease

(2012) N. O. Kaakoush et al.   JOURNAL OF CLINICAL MICROBIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

16S rRNA Gene Pyrosequencing Reveals Bacterial Dysbiosis in the Duodenum of Dogs with Idiopathic Inflammatory Bowel Disease

(2012) Jan S. Suchodolski et al.   PLoS One

Comparison of the Fecal Microbiota of Healthy Horses and Horses with Colitis by High Throughput Sequencing of the V3-V5 Region of the 16S rRNA Gene

(2012) Marcio C. Costa et al.   PLoS One

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes

(2011) Thomas M. Gihring et al.   ENVIRONMENTAL MICROBIOLOGY

Characterization of the fecal bacteria communities of forage-fed horses by pyrosequencing of 16S rRNA V4 gene amplicons

(2011) Megan L. Shepherd et al.   FEMS MICROBIOLOGY LETTERS

Twin Study Indicates Loss of Interaction Between Microbiota and Mucosa of Patients With Ulcerative Colitis

(2011) Patricia Lepage et al.   GASTROENTEROLOGY

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effects on the equine colon ecosystem of grass silage and haylage diets after an abrupt change from hay1

(2009) S. Muhonen et al.   JOURNAL OF ANIMAL SCIENCE

Molecular analysis of the bacterial microbiota in duodenal biopsies from dogs with idiopathic inflammatory bowel disease

(2009) Jan S. Suchodolski et al.   VETERINARY MICROBIOLOGY

Six intestinal microflora-associated characteristics in sport horses

(2007) E. Collinder et al.   EQUINE VETERINARY JOURNAL

Effects of dietary short-chain fructooligosaccharides on the intestinal microflora of horses subjected to a sudden change in diet

(2007) F. Respondek et al.   JOURNAL OF ANIMAL SCIENCE