Basic concepts of epigenetics

Identification of differential protein interactors of lamin A and progerin

(2014) Nard Kubben et al.   Nucleus

HP1c casts light on dark matter

(2011) So Hee Kwon et al.   CELL CYCLE

Location of rRNA Transcription to the Nucleolar Components: Disappearance of the Fibrillar Centers in Nucleoli of Regenerating Rat Hepatocytes

(2011) Lorenzo Montanaro et al.   CELL STRUCTURE AND FUNCTION

Gestational low protein diet in the rat mediatesIgf2gene expression in male offspring via altered hepatic DNA methylation

(2011) Li Gong et al.   Epigenetics

Biological memories of past environments: Epigenetic pathways to health disparities

(2011) Zaneta M. Thayer et al.   Epigenetics

Plant Homeodomain (PHD) Fingers of CHD4 Are Histone H3-binding Modules with Preference for Unmodified H3K4 and Methylated H3K9

(2011) Robyn E. Mansfield et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Role of Histone H4 Biotinylation in the Structure of Nucleosomes

(2011) Nina A. Filenko et al.   PLoS One

Control of DNMT1 Abundance in Epigenetic Inheritance by Acetylation, Ubiquitylation, and the Histone Code

(2011) C. Bronner   Science Signaling

HMGN5/NSBP1: A new member of the HMGN protein family that affects chromatin structure and function

(2010) Mark Rochman et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

HMGB proteins: Interactions with DNA and chromatin

(2010) Michal Štros   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Decreased expression of GRAF1/OPHN-1-L in the X-linked alpha thalassemia mental retardation syndrome

(2010) Vincenza Barresi et al.   BMC Medical Genomics

Dietary methyl donors, methyl metabolizing enzymes, and epigenetic regulators: diet–gene interactions and promoter CpG island hypermethylation in colorectal cancer

(2010) Stefan de Vogel et al.   CANCER CAUSES & CONTROL

Molecular mechanisms of centrosome and cytoskeleton anchorage at the nuclear envelope

(2010) Maria Schneider et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

One-Carbon Metabolism and Alzheimers Disease: Focus on Epigenetics

(2010) Fabio Coppede   CURRENT GENOMICS

Molecular and Enzymatic Profiles of Mammalian DNA Methyltransferases: Structures and Targets for Drugs

(2010) F. Xu et al.   CURRENT MEDICINAL CHEMISTRY

Developmental role for ACF1-containing nucleosome remodellers in chromatin organisation

(2010) M. Chioda et al.   DEVELOPMENT

Changes in the nuclear deposition of histone H2A variants during pre-implantation development in mice

(2010) B. Nashun et al.   DEVELOPMENT

Uhrf1 and Dnmt1 are required for development and maintenance of the zebrafish lens

(2010) Rachel K. Tittle et al.   DEVELOPMENTAL BIOLOGY

BRG1 helps RNA polymerase II to overcome a nucleosomal barrier during elongation, in vivo

(2010) Alicia Subtil-Rodríguez et al.   EMBO REPORTS

The epigenome: Archive of the prenatal environment

(2010) Bastiaan T. Heijmans et al.   Epigenetics

The Mi-2/NuRD complex: A critical epigenetic regulator of hematopoietic development, differentiation and cancer

(2010) Julita Ramírez et al.   Epigenetics

LINE-1 DNA methylation is inversely correlated with cord plasma homocysteine in man: A preliminary study

(2010) Anthony A. Fryer et al.   Epigenetics

Cell cycle-dependent accumulation of histone H3.3 and euchromatic histone modifications in pericentromeric heterochromatin in response to a decrease in DNA methylation levels

(2010) Kazuto Sugimura et al.   EXPERIMENTAL CELL RESEARCH

Structural implications for K5/K12-di-acetylated histone H4 recognition by the second bromodomain of BRD2

(2010) Takashi Umehara et al.   FEBS LETTERS

Gcn5 regulates the dissociation of SWI/SNF from chromatin by acetylation of Swi2/Snf2

(2010) J.-H. Kim et al.   GENES & DEVELOPMENT

Epigenetic Contribution to Covariance Between Relatives

(2010) O. Tal et al.   GENETICS

Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis

(2010) M. L. Conerly et al.   GENOME RESEARCH

Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin

(2010) N. C. Riddle et al.   GENOME RESEARCH

Ubiquitin-dependent and Ubiquitin-independent Control of Subunit Stoichiometry in the SWI/SNF Complex

(2010) Brian R. Keppler et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

NuA4-dependent Acetylation of Nucleosomal Histones H4 and H2A Directly Stimulates Incorporation of H2A.Z by the SWR1 Complex

(2010) Mohammed Altaf et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

CLLD8/KMT1F Is a Lysine Methyltransferase That Is Important for Chromosome Segregation

(2010) Claire Falandry et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Genomic Profiling of HMGN1 Reveals an Association with Chromatin at Regulatory Regions

(2010) S. Cuddapah et al.   MOLECULAR AND CELLULAR BIOLOGY

The ACF1 Complex Is Required for DNA Double-Strand Break Repair in Human Cells

(2010) Li Lan et al.   MOLECULAR CELL

Sequence-specific recognition of methylated DNA by human zinc-finger proteins

(2010) Nobuhiro Sasai et al.   NUCLEIC ACIDS RESEARCH

The Human Proteins MBD5 and MBD6 Associate with Heterochromatin but They Do Not Bind Methylated DNA

(2010) Sophie Laget et al.   PLoS One

Epigenetic modifications and human pathologies: cancer and CVD

(2010) Susan J. Duthie   PROCEEDINGS OF THE NUTRITION SOCIETY

Structure and function of SWI/SNF chromatin remodeling complexes and mechanistic implications for transcription

(2010) Liling Tang et al.   PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY

Current and Potential Anticancer Drugs Targeting Members of the UHRF1 Complex Including Epigenetic Modifiers

(2010) Motoko Unoki   Recent Patents on Anti-Cancer Drug Discovery

Molecular Signals of Epigenetic States

(2010) Roberto Bonasio et al.   SCIENCE

DNMT1 Stability Is Regulated by Proteins Coordinating Deubiquitination and Acetylation-Driven Ubiquitination

(2010) Z. Du et al.   Science Signaling

Histone H1 variant-specific lysine methylation by G9a/KMT1C and Glp1/KMT1D

(2010) Thomas Weiss et al.   Epigenetics & Chromatin

Molecular coupling of DNA methylation and histone methylation

(2010) Hideharu Hashimoto et al.   Epigenomics

Epigenetic mechanisms for nutrition determinants of later health outcomes

(2009) Steven H Zeisel   AMERICAN JOURNAL OF CLINICAL NUTRITION

Binding of the CHD4 PHD2 finger to histone H3 is modulated by covalent modifications

(2009) Catherine A. Musselman et al.   BIOCHEMICAL JOURNAL

H2A.Z and H3.3 Histone Variants Affect Nucleosome Structure: Biochemical and Biophysical Studies

(2009) Amit Thakar et al.   BIOCHEMISTRY

Regulation of chromatin structure and function By HMGN proteins

(2009) Yuri Postnikov et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Role of DNA methylation and methyl-DNA binding proteins in the repression of 5-lipoxygenase promoter activity

(2009) Careen Katryniok et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

dMec: a novel Mi-2 chromatin remodelling complex involved in transcriptional repression

(2009) Natascha Kunert et al.   EMBO JOURNAL

Histone H1 binding is inhibited by histone variant H3.3

(2009) Ulrich Braunschweig et al.   EMBO JOURNAL

FACT facilitates chromatin transcription by RNA polymerases I and III

(2009) Joanna L Birch et al.   EMBO JOURNAL

Offspring of Women Exposed In Utero to Diethylstilbestrol (DES)

(2009) Linda Titus-Ernstoff et al.   EPIDEMIOLOGY

Haploinsufficiency of MBD5 associated with a syndrome involving microcephaly, intellectual disabilities, severe speech impairment and seizures

(2009) Stephen R Williams et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Interaction between the inner nuclear membrane lamin B receptor and the heterochromatic methyl binding protein, MeCP2

(2009) Alessia Guarda et al.   EXPERIMENTAL CELL RESEARCH

Epigenetics: intrauterine growth retardation (IUGR) modifies the histone code along the rat hepatic IGF-1 gene

(2009) Qi Fu et al.   FASEB JOURNAL

Comparative analysis of H2A.Z nucleosome organization in the human and yeast genomes

(2009) M. Y. Tolstorukov et al.   GENOME RESEARCH

Translational Isoforms of FOG1 Regulate GATA1-interacting Complexes

(2009) Jonathan W. Snow et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Crystal Structure of Malaria Parasite Nucleosome Assembly Protein

(2009) Jasmita Gill et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Histone modifications dictate specific biological readouts

(2009) Anjana Munshi et al.   Journal of Genetics and Genomics

Structure and Epigenetics of Nucleoli in Comparison With Non-nucleolar Compartments

(2009) Eva Bártová et al.   JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY

Can our understanding of epigenetics assist with primary prevention of congenital defects?

(2009) M. L. Martinez-Frias   JOURNAL OF MEDICAL GENETICS

Energetics, epigenetics, mitochondrial genetics

(2009) Douglas C. Wallace et al.   MITOCHONDRION

Selective Anchoring of DNA Methyltransferases 3A and 3B to Nucleosomes Containing Methylated DNA

(2009) S. Jeong et al.   MOLECULAR AND CELLULAR BIOLOGY

The Interaction of NSBP1/HMGN5 with Nucleosomes in Euchromatin Counteracts Linker Histone-Mediated Chromatin Compaction and Modulates Transcription

(2009) Mark Rochman et al.   MOLECULAR CELL

The impact of retrotransposons on human genome evolution

(2009) Richard Cordaux et al.   NATURE REVIEWS GENETICS

Histone chaperone Chz1p regulates H2B ubiquitination and subtelomeric anti-silencing

(2009) Yakun Wan et al.   NUCLEIC ACIDS RESEARCH

Social Stressors and Strengths as Predictors of Infant Birth Weight in Low-Income African American Women

(2009) Dawn E. Dailey   NURSING RESEARCH

MECP2 Isoform-Specific Vectors with Regulated Expression for Rett Syndrome Gene Therapy

(2009) Mojgan Rastegar et al.   PLoS One

Human BAHD1 promotes heterochromatic gene silencing

(2009) H. Bierne et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Epigenetics: molecular mechanisms and implications for disease

(2009) Adam E. Handel et al.   TRENDS IN MOLECULAR MEDICINE

Environmental signals and transgenerational epigenetics

(2009) Michael K Skinner et al.   Epigenomics

Interaction of HP1 and Brg1/Brm with the Globular Domain of Histone H3 Is Required for HP1-Mediated Repression

(2009) Marc Lavigne et al.   PLoS Genetics

Epigenetics and the embodiment of race: Developmental origins of US racial disparities in cardiovascular health

(2008) Christopher W. Kuzawa et al.   AMERICAN JOURNAL OF HUMAN BIOLOGY

The role of histone H2A and H2B post-translational modifications in transcription: A genomic perspective

(2008) John J. Wyrick et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Epigenetic mechanisms in mammals

(2008) J. K. Kim et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

In human pachytene spermatocytes, SUMO protein is restricted to the constitutive heterochromatin

(2008) Catherine Metzler-Guillemain et al.   CHROMOSOME RESEARCH

The sunset of somatic genetics and the dawn of epigenetics: a new frontier in pancreatic cancer research

(2008) Gwen Lomberk et al.   CURRENT OPINION IN GASTROENTEROLOGY

Aging by epigenetics—A consequence of chromatin damage?

(2008) John M. Sedivy et al.   EXPERIMENTAL CELL RESEARCH

The loss of methyl-CpG binding protein 1 leads to autism-like behavioral deficits

(2008) A. M. Allan et al.   HUMAN MOLECULAR GENETICS

Keeping things quiet: Roles of NuRD and Sin3 co-repressor complexes during mammalian development

(2008) Patrick McDonel et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Gestational Choline Supply Regulates Methylation of Histone H3, Expression of Histone Methyltransferases G9a (Kmt1c) and Suv39h1 (Kmt1a), and DNA Methylation of Their Genes in Rat Fetal Liver and Brain

(2008) Jessica M. Davison et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Epigenetic Regulation of the Stem Cell Mitogen Fgf-2 by Mbd1 in Adult Neural Stem/Progenitor Cells

(2008) Xuekun Li et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

FACT-Mediated Exchange of Histone Variant H2AX Regulated by Phosphorylation of H2AX and ADP-Ribosylation of Spt16

(2008) Kyu Heo et al.   MOLECULAR CELL

The epigenetics of nuclear envelope organization and disease

(2008) Eric C. Schirmer   MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS

Rad51 Polymerization Reveals a New Chromatin Remodeling Mechanism

(2008) Pauline Dupaigne et al.   PLoS One

Structural Basis for the Recognition of Histone H4 by the Histone-Chaperone RbAp46

(2008) Natalia V. Murzina et al.   STRUCTURE

Inhibition of apoptosis by MAD1 is mediated by repression of the PTEN tumor suppressor gene

(2007) Sabine Rottmann et al.   FASEB JOURNAL

Non-coding RNAs, epigenetics and complexity

(2007) Fabrício F. Costa   GENE