Analysis of the microbial gene landscape and transcriptome for aromatic pollutants and alkane degradation using a novel internally calibrated microarray system

Dynamics of Microbial Community Composition and Function during In Situ Bioremediation of a Uranium-Contaminated Aquifer

(2011) Joy D. Van Nostrand et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Analysis of methanotroph community composition using a pmoA-based microbial diagnostic microarray

(2011) Nancy Stralis-Pavese et al.   Nature Protocols

Development of an Environmental Functional Gene Microarray for Soil Microbial Communities

(2010) K. C. McGrath et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial Communities and Functional Genes Associated with Soil Arsenic Contamination and the Rhizosphere of the Arsenic-Hyperaccumulating Plant Pteris vittata L.

(2010) J. Xiong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Shared probe design and existing microarray reanalysis using PICKY

(2010) Hui-Hsien Chou   BMC BIOINFORMATICS

Metabolic networks, microbial ecology and ‘omics’ technologies: towards understanding in situ biodegradation processes

(2010) Ramiro Vilchez-Vargas et al.   ENVIRONMENTAL MICROBIOLOGY

Characterization of a bacterial community from a Northeast Siberian seacoast permafrost sample

(2010) Shannon M. Hinsa-Leasure et al.   FEMS MICROBIOLOGY ECOLOGY

Responses of microbial community functional structures to pilot-scale uranium in situ bioremediation

(2010) Meiying Xu et al.   ISME Journal

GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity

(2010) Zhili He et al.   ISME Journal

Functional gene diversity of soil microbial communities from five oil-contaminated fields in China

(2010) Yuting Liang et al.   ISME Journal

First Investigation of the Microbiology of the Deepest Layer of Ocean Crust

(2010) Olivia U. Mason et al.   PLoS One

Development of a Common Oligonucleotide Reference Standard for Microarray Data Normalization and Comparison across Different Microbial Communities

(2009) Y. Liang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Enhancement of the microbial community biomass and diversity during air sparging bioremediation of a soil highly contaminated with kerosene and BTEX

(2009) Nadja Kabelitz et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Metagenomics reveals diversity and abundance ofmeta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation

(2009) Maria V. Brennerova et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial functional structure ofMontastraea faveolata, an important Caribbean reef-building coral, differs between healthy and yellow-band diseased colonies

(2009) Nikole E. Kimes et al.   ENVIRONMENTAL MICROBIOLOGY

Microarray-based analysis of microbial functional diversity along an oil contamination gradient in oil field

(2009) Yuting Liang et al.   FEMS MICROBIOLOGY ECOLOGY

Novel organization of aromatic degradation pathway genes in a microbial community as revealed by metagenomic analysis

(2009) Hikaru Suenaga et al.   ISME Journal

Automatic policing of biochemical annotations using genomic correlations

(2009) Tzu-Lin Hsiao et al.   Nature Chemical Biology

GeoChip-based analysis of metabolic diversity of microbial communities at the Juan de Fuca Ridge hydrothermal vent

(2009) F. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamilies

(2009) Alexandra M. Schnoes et al.   PLoS Computational Biology

alkB homologs in thermophilic bacteria of the genus Geobacillus

(2008) T. P. Tourova et al.   MOLECULAR BIOLOGY