Linking environmental processes to thein situfunctioning of microorganisms by high-resolution secondary ion mass spectrometry (NanoSIMS) and scanning transmission X-ray microscopy (STXM)

Look@NanoSIMS - a tool for the analysis of nanoSIMS data in environmental microbiology

(2012) Lubos Polerecky et al.   ENVIRONMENTAL MICROBIOLOGY

Chemical Analysis of Single Cells

(2011) Yuqing Lin et al.   ANALYTICAL CHEMISTRY

Green Rust Formation during Fe(II) Oxidation by the Nitrate-Reducing Acidovorax sp. Strain BoFeN1

(2011) Claudia Pantke et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Carbon, nitrogen and O2 fluxes associated with the cyanobacterium Nodularia spumigena in the Baltic Sea

(2011) Helle Ploug et al.   ISME Journal

Nitrogen fixation and transfer in open ocean diatom–cyanobacterial symbioses

(2011) Rachel A Foster et al.   ISME Journal

Physico-mechanical characterisation of cells using atomic force microscopy — Current research and methodologies

(2011) Hayden K. Webb et al.   JOURNAL OF MICROBIOLOGICAL METHODS

NanoSIMS as a tool for characterizing soil model compounds and organomineral associations in artificial soils

(2011) Katja Heister et al.   JOURNAL OF SOILS AND SEDIMENTS

Imaging mass spectrometry in microbiology

(2011) Jeramie D. Watrous et al.   NATURE REVIEWS MICROBIOLOGY

Submicron scale imaging of soil organic matter dynamics using NanoSIMS – From single particles to intact aggregates

(2011) Carsten W. Mueller et al.   ORGANIC GEOCHEMISTRY

High-Resolution Secondary Ion Mass Spectrometry Reveals the Contrasting Subcellular Distribution of Arsenic and Silicon in Rice Roots

(2011) K. L. Moore et al.   PLANT PHYSIOLOGY

Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil

(2011) M. Tourna et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hygroscopic Behavior of Individual Submicrometer Particles Studied by X-ray Spectromicroscopy

(2010) Suman Ghorai et al.   ANALYTICAL CHEMISTRY

Biological Cluster Mass Spectrometry

(2010) Nicholas Winograd et al.   Annual Review of Physical Chemistry

Imaging Hydrated Microbial Extracellular Polymers: Comparative Analysis by Electron Microscopy

(2010) Alice C. Dohnalkova et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial endolithic colonization and the geochemical environment in young seafloor basalts

(2010) C.S. Cockell et al.   CHEMICAL GEOLOGY

Advanced imaging techniques for assessment of structure, composition and function in biofilm systems

(2010) Thomas R. Neu et al.   FEMS MICROBIOLOGY ECOLOGY

Lithotrophic iron-oxidizing bacteria produce organic stalks to control mineral growth: implications for biosignature formation

(2010) Clara S Chan et al.   ISME Journal

Effect of humidity on individual SnO2 coated carbon nanotubes studied by in situ STXM

(2010) Jian Wang et al.   JOURNAL OF ELECTRON SPECTROSCOPY AND RELATED PHENOMENA

Developments in molecular SIMS depth profiling and 3D imaging of biological systems using polyatomic primary ions

(2010) John S. Fletcher et al.   MASS SPECTROMETRY REVIEWS

Improving Sensitivity in Soft X-ray STXM Using Low Energy X-ray Fluorescence

(2010) AP Hitchcock et al.   MICROSCOPY AND MICROANALYSIS

Desulfovibrio magneticus RS-1 contains an iron- and phosphorus-rich organelle distinct from its bullet-shaped magnetosomes

(2010) M. E. Byrne et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An appraisal of methods for linking environmental processes to specific microbial taxa

(2010) Maria-Luisa Gutierrez-Zamora et al.   REVIEWS IN ENVIRONMENTAL SCIENCE AND BIO-TECHNOLOGY

Evaluation of ionization yields under gallium bombardment

(2010) Gilles Frache et al.   SURFACE AND INTERFACE ANALYSIS

Molecular SIMS imaging; spatial resolution and molecular sensitivity: have we reached the end of the road? Is there light at the end of the tunnel?

(2010) John S. Fletcher et al.   SURFACE AND INTERFACE ANALYSIS

Ultra-high performance multi-turn TOF-SIMS system with a femto-second laser for post-ionization: investigation of the performance in linear mode

(2010) Morio Ishihara et al.   SURFACE AND INTERFACE ANALYSIS

Single-Cell Ecophysiology of Microbes as Revealed by Raman Microspectroscopy or Secondary Ion Mass Spectrometry Imaging

(2009) Michael Wagner   Annual Review of Microbiology

Extracellular Iron Biomineralization by Photoautotrophic Iron-Oxidizing Bacteria

(2009) J. Miot et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Morphological and biochemical changes in Pseudomonas fluorescens biofilms induced by sub-inhibitory exposure to antimicrobial agents

(2009) James J. Dynes et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Characterizing magnetism of individual magnetosomes by X-ray magnetic circular dichroism in a scanning transmission X-ray microscope

(2009) Karen P. Lam et al.   CHEMICAL GEOLOGY

Co-occurrence of denitrification and nitrogen fixation in a meromictic lake, Lake Cadagno (Switzerland)

(2009) Hannah Halm et al.   ENVIRONMENTAL MICROBIOLOGY

Patterns of15N assimilation and growth of methanotrophic ANME-2 archaea and sulfate-reducing bacteria within structured syntrophic consortia revealed by FISH-SIMS

(2009) Victoria J. Orphan et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial Architecture of Environmental Sulfur Processes: A Novel Syntrophic Sulfur-Metabolizing Consortia

(2009) Kelsey L.I. Norlund et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Biogeochemical Redox Processes and their Impact on Contaminant Dynamics

(2009) Thomas Borch et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Geobiological investigations using secondary ion mass spectrometry: microanalysis of extant and paleo-microbial processes

(2009) V. J. ORPHAN et al.   Geobiology

Soft X-ray spectro-tomography study of cyanobacterial biomineral nucleation

(2009) M. OBST et al.   Geobiology

Soft X-ray spectromicroscopy of nickel sorption in a natural river biofilm

(2009) A. P. HITCHCOCK et al.   Geobiology

Precipitation of amorphous CaCO3 (aragonite-like) by cyanobacteria: A STXM study of the influence of EPS on the nucleation process

(2009) M. Obst et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Iron oxyhydroxide mineralization on microbial extracellular polysaccharides

(2009) Clara S. Chan et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Optimization of analysis of soft X-ray spectromicroscopy at the Ca 2p edge

(2009) S. Hanhan et al.   JOURNAL OF ELECTRON SPECTROSCOPY AND RELATED PHENOMENA

Simultaneous soft X-ray transmission and emission microscopy

(2009) A. Gianoncelli et al.   NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT

In Situ Mapping of Nutrient Uptake in the Rhizosphere Using Nanoscale Secondary Ion Mass Spectrometry

(2009) P. L. Clode et al.   PLANT PHYSIOLOGY

Fixation and fate of C and N in the cyanobacterium Trichodesmium using nanometer-scale secondary ion mass spectrometry

(2009) J. A. Finzi-Hart et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deep-Sea Archaea Fix and Share Nitrogen in Methane-Consuming Microbial Consortia

(2009) A. E. Dekas et al.   SCIENCE

A New Dynamic in Mass Spectral Imaging of Single Biological Cells

(2008) John S. Fletcher et al.   ANALYTICAL CHEMISTRY

Advances in Imaging Secondary Ion Mass Spectrometry for Biological Samples

(2008) Steven G. Boxer et al.   Annual Review of Biophysics

Linking Microbial Phylogeny to Metabolic Activity at the Single-Cell Level by Using Enhanced Element Labeling-Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (EL-FISH) and NanoSIMS

(2008) S. Behrens et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

3-d chemical imaging using angle-scan nanotomography in a soft X-ray scanning transmission X-ray microscope

(2008) A. P. Hitchcock et al.   APPLIED PHYSICS A-MATERIALS SCIENCE & PROCESSING

Molecular depth profiling and imaging using cluster ion beams with femtosecond laser postionization

(2008) D. Willingham et al.   APPLIED SURFACE SCIENCE

Mapping the Speciation of Iron inPseudomonas aeruginosaBiofilms Using Scanning Transmission X-ray Microscopy

(2008) Ryan C. Hunter et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Iron biomineralization by anaerobic neutrophilic iron-oxidizing bacteria

(2008) Jennyfer Miot et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Micron-scale mapping of sulfur cycling across the oxycline of a cyanobacterial mat: a paired nanoSIMS and CARD-FISH approach

(2008) David Andrew Fike et al.   ISME Journal

Imaging Nutrient Distributions in Plant Tissue Using Time-of-Flight Secondary Ion Mass Spectrometry and Scanning Electron Microscopy

(2008) R. Metzner et al.   PLANT PHYSIOLOGY

A single-cell view on the ecophysiology of anaerobic phototrophic bacteria

(2008) N. Musat et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE

Simultaneous analysis of microbial identity and function using NanoSIMS

(2007) Tianlun Li et al.   ENVIRONMENTAL MICROBIOLOGY

Comparison of NEXAFS microscopy and TEM-EELS for studies of soft matter

(2007) Adam P. Hitchcock et al.   MICRON