Review
Agronomy
Athina Koutouleas, David B. Collinge, Eric Boa
Summary: This article highlights past and present events regarding coffee leaf rust, including its historical spread, recent epidemic hypotheses, management options, and its relationship with climate change. Understanding past events related to CLR can help better prepare for future outbreaks.
Article
Agronomy
Luis F. Aristizabal, Melissa A. Johnson
Summary: Coffee leaf rust (CLR) is a highly damaging disease for the coffee industry globally. In Hawaii, CLR was first detected in 2020 and rapidly spread across the state. A monitoring program was initiated in Kona, West Hawaii Island, to track the spread of this invasive disease across different elevations. The study provides insights into CLR patterns and suggests improved fungicide coverage and timing are necessary to control the disease effectively.
Article
Agronomy
Gustavo Hiroshi Sera, Carlos Henrique Siqueira de Carvalho, Juliana Costa de Rezende Abrahao, Edson Ampelio Pozza, Jose Braz Matiello, Saulo Roque de Almeida, Lucas Bartelega, Deila Magna dos Santos Botelho
Summary: This review provides an overview of coffee leaf rust (CLR) in Brazil, covering its historical introduction, control measures, environmental conditions, breeding methods, resistance levels, resistant cultivar development, and chemical control methods. Brazil has developed numerous cultivars with varying levels of resistance and increased the planting of new resistant cultivars.
Article
Multidisciplinary Sciences
Gerba Daba, Gezahegn Berecha, Bart Lievens, Kitessa Hundera, Kenny Helsen, Olivier Honnay
Summary: This study assessed the infection of coffee leaf rust (CLR) in Ethiopian coffee agroforestry systems with different management intensities. It found that semi-forest coffee systems (SFC) had significantly higher CLR infection rates. Lower canopy cover and human impact partly explained the higher infection in SFC systems. Reduced wind speed and droplet penetration under closed canopies, as well as reduced human-facilitated spore dispersal, were suggested as the dominant mechanisms behind lower CLR infection in forest coffee (FC) systems.
Article
Agriculture, Multidisciplinary
Natacha Motisi, Pierre Bommel, Gregoire Leclerc, Marie-Helene Robin, Jean-Noel Aubertot, Andrea Arias Butron, Isabelle Merle, Edwin Treminio, Jacques Avelino
Summary: This study presents a qualitative model, ExpeRoya, which integrates 229 factors affecting the incidence of coffee leaf rust and can forecast the risk of disease at plot and landscape levels. Compared to existing quantitative models, ExpeRoya incorporates expert knowledge and extensive field observations to provide more accurate descriptions of the system's interactions. Coffee institutes in Honduras and Nicaragua have started using ExpeRoya to assist in issuing monthly rust warning bulletins for farmers.
AGRICULTURAL SYSTEMS
(2022)
Article
Forestry
Humberto Fanelli Carvalho, Luis Felipe Ventorim Ferrao, Giovanni Galli, Juliana Vieira Almeida Nonato, Lilian Padilha, Mirian Perez Maluf, Marcio Fernando Ribeiro de Resende Jr, Roberto Fritsche-Neto, Oliveiro Guerreiro-Filho
Summary: Obtaining resistance cultivars for leaf miner and leaf rust is crucial for Brazil's national coffee breeding program. However, challenges in quantifying and detecting genetic diversity for these traits arise from a narrow genetic basis and founder effect consequences. Biotechnology tools combined with classical breeding strategies are effective in detecting variability and deploying precision selection.
TREE GENETICS & GENOMES
(2023)
Article
Agriculture, Multidisciplinary
Dyanna R. Pereira, Denis H. S. Nadaleti, Eduardo C. Rodrigues, Ackson D. da Silva, Marcelo R. Malta, Samuel P. de Carvalho, Gladyston R. Carvalho
Summary: The study found that both genetic and chemical control can reduce the damage to the composition of coffee beans caused by the disease. Genotypes with resistant ancestry respond better to chemical control even with resistance breakdown. The combination of genetic and chemical control helps increase the sugar content in coffee beans.
JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE
(2021)
Article
Biotechnology & Applied Microbiology
Gerba Daba, Robin Daelemans, Gezahegn Berecha, Margot W. J. Geerinck, Christel Verreth, Sam Crauwels, Bart Lievens, Olivier Honnay
Summary: This study investigated the genetic diversity of coffee leaf rust (CLR) caused by H. vastatrix in Ethiopia using genetic fingerprinting. The results showed that different coffee management systems and altitudes have significant effects on the genetic structure of CLR. The findings suggest that spore dispersal and selection pressure are likely responsible for the observed high genetic diversity and structure of CLR isolates in Ethiopia.
INTERNATIONAL MICROBIOLOGY
(2023)
Article
Plant Sciences
Roxanna Patricia Palma, Joao Paulo Arantes Rodrigues da Cunha, Denise Garcia de Santana
Summary: This study aimed to determine the appropriate sample size for application technology experiments in coffee crops by evaluating foliar spray deposition and soil runoff. The optimal sample size was five to eight sets of leaves for spray deposition and four to five Petri dishes for soil runoff.
Article
Agronomy
Suzany A. Leite, Raul Narciso C. Guedes, Daniela R. Costa, Yelitza C. Colmenarez, Sylvana N. Matsumoto, Mateus P. Santos, Beatriz S. Coelho, Aldenise A. Moreira, Maria A. Castellani
Summary: Thiamethoxam exhibited detrimental effects on the morphophysiological traits of coffee seedlings, but had a bioactivator effect on leaf area at low concentration without compromising its effectiveness against leaf miner populations. However, the bioactivator effect may encourage unnecessary use of this insecticide, potentially leading to higher selection for insecticide resistance and a decline in its effectiveness against the Neotropical leaf miner.
PEST MANAGEMENT SCIENCE
(2022)
Review
Agronomy
Mario L. de Resende, Edson A. Pozza, Tharyn Reichel, Deila M. S. Botelho
Summary: Organic coffee is an economically important crop globally, but faces challenges in disease management, particularly coffee rust. Effective disease management strategies include using rust-resistant cultivars, cultural management, biological control, use of plant extracts, and chemical rust control. This review aims to provide insight for researchers and producers seeking alternative strategies to control rust in organic coffee cultivation systems.
Article
Plant Sciences
Lissa Izabel Ferreira de Andrade, Paulo Cassio Alves Linhares, Thais Melo da Fonseca, Antonia Almeida da Silva, Jandeilson Pereira dos Santos, Marcio Paulo Pereira, Vania Aparecida Silva, Paulo Eduardo Ribeiro Marchiori
Summary: The study compared the responses of two potential genotypes and two commercial cultivars to drought and water recovery, and determined the drought tolerance strategies of the new genotypes by measuring root anatomy and photosynthetic parameters. The results showed that the new genotypes enhanced drought tolerance by increasing root hair number and adjusting root structure. Despite the reduction of photosynthetic parameters under drought conditions, the genotypes showed higher photosynthetic efficiency after water recovery.
ACTA PHYSIOLOGIAE PLANTARUM
(2022)
Review
Plant Sciences
Nora E. Torres Castillo, Yovanina Aguilera Acosta, Lizeth Parra-Arroyo, Maria Adriana Martinez-Prado, Veronica M. Rivas-Galindo, Hafiz M. N. Iqbal, A. Damiano Bonaccorso, Elda M. Melchor-Martinez, Roberto Parra-Saldivar
Summary: This article summarizes the impact of Hemileia vastatrix and coffee leaf rust disease as well as the existing control methods, emphasizing the importance of selective fungicidal activity against HV and the nutrition of coffee crops. Additionally, it introduces the pathogen-suppressive effects of biochar and its suitability for organic schemes.
Article
Agriculture, Multidisciplinary
Jaime Honorato Junior, Daniel Debona, Laercio Zambolim, Fabricio Avila Rodrigues
Summary: This study found that the efficiency of phosphites in controlling coffee leaf rust varied depending on the accompanying cation, dose, and washing conditions. Copper phosphite showed the best control of CLR irrespective of the dose and washing conditions.
Article
Biodiversity Conservation
Kulian Basil Santa Cecilia Marques, Leda Goncalves Fernandes, Ludmila Caproni Morais, Khalid Haddi, Luis Claudio Paterno Silveira
Summary: The study examines the impact of different coffee cultivation systems on biodiversity and the control of pest infestation. The presence of parasitoids in pesticide-free systems contributes to the regulation of coffee leaf miner infestation. The braconid Orgilus niger and Stiropius reticulatus are identified as promising control providers.
Editorial Material
Plant Sciences
T. A. Carraro, A. Claus, R. M. Scremin, H. S. S. Duarte, L. L. May-De-Mio
Article
Agronomy
Livia Maria Lemos Hoepers, Gabriel Koch, Mayara Catherine Candido Silva, Lucimeris Ruaro, Renata Faier Calegario, Joao Carlos Bespalhok Filho, Ricardo Augusto de Oliveira, Henrique da Silva Silveira Duarte
Summary: The molecular marker G1 had low efficiency in predicting resistance to orange rust in Brazilian sugarcane genotypes, indicating limited effectiveness in selection for breeding programs and commercial cultivars.
Article
Agronomy
Pereira Caio, Ferreira Bruno, Aucique-Perez Carlos, Barreto Robert
Summary: Cultivated roses are crucial in the global cut flower industry, but a new fungus Diaporthe rosiphthora causing dieback disease in roses was discovered in Vicosa, Brazil. This fungus was found to be pathogenic to multiple rose cultivars, highlighting its significance in the management of rose dieback disease.
Article
Plant Sciences
Gloria Soriano Vidal, Heloisa Thomazi Kleina, Giovana Beger, Walmes Marques Zeviani, Louise Larissa May De Mio, Henrique da Silva Silveira Duarte
Summary: This study aimed to evaluate the effect of temperature and wetness period on urediniospore germination of Tranzschelia discolor and the influence of temperature in the latent period and the number of pustules produced by isolates obtained from three states in Brazil. The results showed significant differences in spore germination, latent period, and pustule numbers among isolates from different states, indicating the importance of environmental factors in the development of plum leaf rust epidemics.
JOURNAL OF PHYTOPATHOLOGY
(2021)
Editorial Material
Plant Sciences
M. H. Hahn, J. Gelain, W. V. Pereira, D. D. Martinha, L. L. May-De-Mio, H. S. S. Duarte
Article
Plant Sciences
Patricia Ricardino Silveira, Carlos Eduardo Aucique-Perez, Maria Fernanda Antunes Cruz, Fabricio Avila Rodrigues
Summary: Silicon can effectively enhance maize resistance against Northern leaf blight (NLB) by reducing foliar symptoms, increasing activities of antioxidant and host defense enzymes, and maintaining photosynthetic efficiency.
JOURNAL OF PHYTOPATHOLOGY
(2021)
Article
Plant Sciences
Marcos Fernando Basso, Julia Almeida Costa, Thuanne Pires Ribeiro, Fabricio Barbosa Monteiro Arraes, Isabela Tristan Lourenco-Tessutti, Amanda Ferreira Macedo, Maysa Rosa das Neves, Sarah Muniz Nardeli, Luis Willian Arge, Carlos Eduardo Aucique Perez, Paolo Lucas Rodrigues Silva, Leonardo Lima Pepino de Macedo, Maria Eugenia Lisei-de-Sa, Regina Maria Santos Amorim, Eduardo Romano de Campos Pinto, Maria Cristina Mattar Silva, Carolina Vianna Morgante, Eny Iochevet Segal Floh, Marcio Alves-Ferreira, Maria Fatima Grossi-de-Sa
Summary: Overexpression of the CaHB12 gene enhances plant tolerance to drought stress and may enhance defense responses to drought through regulating genes related to the ABA signaling pathway. The decrease in IAA levels resulting from CaHB12 overexpression can prevent leaf abscission in plants under stress. These findings provide important insights for breeding cotton varieties and conducting field trials on water deficit tolerance.
PLANT PHYSIOLOGY AND BIOCHEMISTRY
(2021)
Article
Multidisciplinary Sciences
Sara Salcedo-Sarmiento, Carlos E. Aucique-Perez, Patricia R. Silveira, Adans A. Colman, Andre L. Silva, Paloma S. Correa Mansur, Fabricio A. Rodrigues, Harry C. Evans, Robert W. Barreto
Summary: Calonectria hemileiae shows promise as a biocontrol agent of coffee leaf rust (CLR), with the ability to inhibit rust spore germination and enhance plant resistance through mycoparasitism. The fungus demonstrated significant reduction in CLR severity both in vitro and in planta experiments, with no damage to coffee photosynthesis observed unlike fungicide applications.
Article
Chemistry, Applied
Sanja Cavar Zeljkovic, Carlos Eduardo Aucique-Perez, Nikola Stefelova, Nuria De Diego
Summary: This study demonstrates the combination of phenomics and metabolomics to identify optimal growth conditions for three Mentha species and three Ocimum basilicum genotypes. Primary and secondary metabolites are shown to be good markers for classifying both species, with different responses observed among genotypes under varying nitrate concentrations and salt stress. The study highlights the importance of utilizing chemical markers associated with ideal growth conditions for these plants.
Article
Plant Sciences
Ana Carolina Lyra Brumat, Louise Larissa May De Mio, Dauri Jose Tessmann, Henrique da Silva Silveira Duarte, Celso Garcia Auer, Alvaro Figueredo Dos Santos
Summary: Persimmon fruit from commercial orchards in southern Brazil was found to have dark firm rot. This study identified the causal agent as Phytophthora tropicalis through morphophysiological and molecular analysis of the isolates.
JOURNAL OF PHYTOPATHOLOGY
(2022)
Article
Plant Sciences
Alba E. Hernandiz, Carlos Eduardo Aucique-Perez, Sanja Cavar Zeljkovic, Nikola Stefelova, Sara Salcedo Sarmiento, Lukas Spichal, Nuria De Diego
Summary: Biostimulants are a popular area of research in alleviating the impact of abiotic stresses on crops. This study focused on small molecule-based biostimulants, specifically polyamines, and their effects on Arabidopsis seedlings under optimal growth conditions and stress. The results showed that priming with polyamines improved plant growth and stress tolerance, with specific metabolic pathways being implicated in regulating growth and development. This research highlights the potential of polyamines as effective biostimulants for mitigating the adverse effects of abiotic stress on plants.
Article
Plant Sciences
Juliana Nicolau Maia, Giovana Beger, Natalia Aparecida Peres, Cristiano Nunes Nesi, Louise Larissa May De Mio, Henrique da Silva Silveira Duarte
Summary: Botrytis cinerea is a major pathogen in strawberry, causing significant losses both in the field and during post-harvest. Chemical control methods are commonly used, but resistance to fungicides has been reported worldwide. This study aimed to determine the baseline sensitivity of B. cinerea to fludioxonil and cyprodinil and evaluate the efficacy of these fungicides in controlling post-harvest gray mold.
TROPICAL PLANT PATHOLOGY
(2023)
Article
Plant Sciences
Juliana Nicolau Maia, Giovana Beger, Isadora Brocco Boldrini, Natalia Aparecida Peres, Louise Larissa May De Mio, Henrique da Silva Silveira Duarte
Summary: Due to the significant losses caused by the pathogen Botrytis cinerea in strawberry, effective management is needed but can be difficult to achieve due to the pathogen's resistance to fungicides. This study evaluated the sensitivity of B. cinerea isolates to the fungicide pyrimethanil and found a positive correlation between pyrimethanil and cyprodinil resistance. Pyrimethanil showed good efficacy in controlling gray mold of strawberry, but monitoring is necessary to prevent the selection of resistant isolates.
TROPICAL PLANT PATHOLOGY
(2023)
Article
Agronomy
Evandro Keller, Gabriel Koch, Mayara Catherine Candido Silva, Patricia Wyler, Julio Cesar Barbosa, Jorge Alberto Marques Rezende, Henrique da Silva Silveira Duarte, Renata Faier Calegario
Summary: In recent decades, the transmission of viruses by whiteflies has become a problem in tomato fields, posing a threat to potato crops. This study conducted a survey of begomoviruses and criniviruses in tomato and potato crops in the state of Parana, Brazil, from 2015 to 2018. PCR and RT-PCR were used to detect begomoviruses and criniviruses, respectively, using total DNA and RNA extracted from leaves. Results showed a low incidence (6.5%) of crinivirus infecting tomato crops in Parana State, with one amplified fragment sharing 99.71% identity with tomato chlorotic virus (ToCV).
Article
Forestry
Ana Carolina Lyra Brumat, Celso Garcia Auer, Dauri Jose Tessmann, Henrique da Silva Silveira Duarte, alvaro Figueredo dos Santos
Summary: This study reports the first occurrence of Phytophthora macrochlamydospora associated with tree decline in Pinus taeda in Brazil and worldwide. The infected trees exhibited chlorosis, shortened needles, and reduced plant growth. The pathogenicity of the oomycete was confirmed through isolation and molecular characterization.