In silico detection of phylogenetic informative Y-chromosomal single nucleotide polymorphisms from whole genome sequencing data
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
In silico detection of phylogenetic informative Y-chromosomal single nucleotide polymorphisms from whole genome sequencing data
Authors
Keywords
-
Journal
ELECTROPHORESIS
Volume 35, Issue 21-22, Pages 3102-3110
Publisher
Wiley
Online
2014-01-22
DOI
10.1002/elps.201300459
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- An African American Paternal Lineage Adds an Extremely Ancient Root to the Human Y Chromosome Phylogenetic Tree
- (2013) Fernando L. Mendez et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Deep Whole-Genome Sequencing of 100 Southeast Asian Malays
- (2013) Lai-Ping Wong et al. AMERICAN JOURNAL OF HUMAN GENETICS
- AMY-tree: an algorithm to use whole genome SNP calling for Y chromosomal phylogenetic applications
- (2013) Anneleen Van Geystelen et al. BMC GENOMICS
- Updating the Y-chromosomal phylogenetic tree for forensic applications based on whole genome SNPs
- (2013) A. Van Geystelen et al. Forensic Science International-Genetics
- Seeing the Wood for the Trees: A Minimal Reference Phylogeny for the Human Y Chromosome
- (2013) Mannis van Oven et al. HUMAN MUTATION
- Comprehensive Characterization of Human Genome Variation by High Coverage Whole-Genome Sequencing of Forty Four Caucasians
- (2013) Hui Shen et al. PLoS One
- Afghan Hindu Kush: Where Eurasian Sub-Continent Gene Flows Converge
- (2013) Julie Di Cristofaro et al. PLoS One
- Low-Pass DNA Sequencing of 1200 Sardinians Reconstructs European Y-Chromosome Phylogeny
- (2013) P. Francalacci et al. SCIENCE
- Sequencing Y Chromosomes Resolves Discrepancy in Time to Common Ancestor of Males Versus Females
- (2013) G. D. Poznik et al. SCIENCE
- Analysis of insertion-deletion from deep-sequencing data: software evaluation for optimal detection
- (2012) J. A. Neuman et al. BRIEFINGS IN BIOINFORMATICS
- Personal Omics Profiling Reveals Dynamic Molecular and Medical Phenotypes
- (2012) Rui Chen et al. CELL
- A calibrated human Y-chromosomal phylogeny based on resequencing
- (2012) W. Wei et al. GENOME RESEARCH
- In the name of the migrant father—Analysis of surname origins identifies genetic admixture events undetectable from genealogical records
- (2012) M H D Larmuseau et al. HEREDITY
- Accurate whole-genome sequencing and haplotyping from 10 to 20 human cells
- (2012) Brock A. Peters et al. NATURE
- Discovery of Western European R1b1a2 Y Chromosome Variants in 1000 Genomes Project Data: An Online Community Approach
- (2012) Richard A. Rocca et al. PLoS One
- New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing
- (2012) Andreas Keller et al. Nature Communications
- An updated tree of Y-chromosome Haplogroup O and revised phylogenetic positions of mutations P164 and PK4
- (2011) Shi Yan et al. EUROPEAN JOURNAL OF HUMAN GENETICS
- An efficient multiplex genotyping approach for detecting the major worldwide human Y-chromosome haplogroups
- (2011) Mannis van Oven et al. INTERNATIONAL JOURNAL OF LEGAL MEDICINE
- An integrated semiconductor device enabling non-optical genome sequencing
- (2011) Jonathan M. Rothberg et al. NATURE
- A New Topology of the Human Y Chromosome Haplogroup E1b1 (E-P2) Revealed through the Use of Newly Characterized Binary Polymorphisms
- (2011) Beniamino Trombetta et al. PLoS One
- Micro-geographic distribution of Y-chromosomal variation in the central-western European region Brabant
- (2010) Maarten H.D. Larmuseau et al. Forensic Science International-Genetics
- Strong intra- and inter-continental differentiation revealed by Y chromosome SNPs M269, U106 and U152
- (2010) Fulvio Cruciani et al. Forensic Science International-Genetics
- Complete Khoisan and Bantu genomes from southern Africa
- (2010) Stephan C. Schuster et al. NATURE
- Ancient human genome sequence of an extinct Palaeo-Eskimo
- (2010) Morten Rasmussen et al. NATURE
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- Sequencing and analysis of an Irish human genome
- (2010) Pin Tong et al. GENOME BIOLOGY
- The first Korean genome sequence and analysis: Full genome sequencing for a socio-ethnic group
- (2009) S.-M. Ahn et al. GENOME RESEARCH
- FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
- (2009) M. N. Price et al. MOLECULAR BIOLOGY AND EVOLUTION
- Single-molecule sequencing of an individual human genome
- (2009) Dmitry Pushkarev et al. NATURE BIOTECHNOLOGY
- Y chromosome diversity, human expansion, drift, and cultural evolution
- (2009) J. Chiaroni et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Human Genome Sequencing Using Unchained Base Reads on Self-Assembling DNA Nanoarrays
- (2009) R. Drmanac et al. SCIENCE
- New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree
- (2008) T. M. Karafet et al. GENOME RESEARCH
- The complete genome of an individual by massively parallel DNA sequencing
- (2008) David A. Wheeler et al. NATURE
- The diploid genome sequence of an Asian individual
- (2008) Jun Wang et al. NATURE
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started